Contig 000613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007K14Sequence404000613 (2)ref|XP_010260743.1|3e-45PREDICTED: uncharacterized protein LOC104599755 isoform X3 [Nelumbo nucifera] r737013887 (2)ref|XP_009628039.1|394PREDICTED: uncharacterized protein LOC104118496 [Nicotiana tomentosiformis]
JMSF010G11Sequence262000613 (2)ref|XP_008456290.1|2e-13PREDICTED: uncharacterized protein LOC103496280 isoform X4 [Cucumis melo]687013887 (2)ref|XP_009794742.1|368PREDICTED: uncharacterized protein LOC104241503 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF007K14+                          AAGGAAGGCCTAGAGTGTTGCGGAGTTGGGCAGCAGCAAAAATTC
                      ____________________________________________________________
consensus                            AAGGAAGGCCTAGAGTGTTGCGGAGTTGGGCAGCAGCAAAAATTC
 
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JMSF007K14+           TTGTTTCGAGCAGTTTCTCCACGTTGAGTGCACAGGAAGGGTCTCTTGAAGCTTCGTCCT
                      ____________________________________________________________
consensus             TTGTTTCGAGCAGTTTCTCCACGTTGAGTGCACAGGAAGGGTCTCTTGAAGCTTCGTCCT
 
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JMSF010G11+                                                 TTGTAAAAGCCCCATCCAATTG
JMSF007K14+           CCAGTTGCATGAGGCGAACGCAAAACATAGAAACACAATTGTAAAAGCCCCATCCAATT-
                      ____________________________________________________________
consensus             CCAGTTGCATGAGGCGAACGCAAAACATAGAAACACAATTGTAAAAGCCCCATCCAATTG
 
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JMSF010G11+           GGTTTCTGGGTTCCGTCAGCGACGAGGACTACATCTCCGGACTTGGGCGGCGGTCGACCA
JMSF007K14+           GGTTTCTGGGTTCCGTCAGCGACGAGGACTACATCTCCGGACTTGGGCGGCGGTCGACCA
                      ____________________________________________________________
consensus             GGTTTCTGGGTTCCGTCAGCGACGAGGACTACATCTCCGGACTTGGGCGGCGGTCGACCA
 
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JMSF010G11+           ATAATTCTGTCAACAGCACCGCTGTAAACCATTGGGCTCCTCCGGGCTGCTTGGAAGCAA
JMSF007K14+           ATAATTCTGTCAACAGCACCGCTGTAAACCATTGGGCTCCTCCGGGCTGCTTGGAAGCAA
                      ____________________________________________________________
consensus             ATAATTCTGTCAACAGCACCGCTGTAAACCATTGGGCTCCTCCGGGCTGCTTGGAAGCAA
 
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JMSF010G11+           TTTCTTGAAGCGTAGTGGTGGGAGGTGATGACGCCAAAGATAGAGAGCGCAACATGAGAC
JMSF007K14+           TTTCTTGAAGCGTAGTGGTGGGAGGTGATGACGCCAAAGATAGAGAGCGCAACATGAGAC
                      ____________________________________________________________
consensus             TTTCTTGAAGCGTAGTGGTGGGAGGTGATGACGCCAAAGATAGAGAGCGCAACATGAGAC
 
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JMSF010G11+           GGTGACGAGCGGTGAGAAGCATGGCCTGCCTGAACCCTGAAGTGAAGCTAAGCTAACTCC
JMSF007K14+           GGTGACGAGCGGTGAGAAGCATGGCCTGCCTGAACCCTGAAGTGAAGCTAAGCTAACTCC
                      ____________________________________________________________
consensus             GGTGACGAGCGGTGAGAAGCATGGCCTGCCTGAACCCTGAAGTGAAGCTAAGCTAACTCC