Contig 000608:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010B06Sequence586000608 (4)ref|XP_009784172.1|3e-71PREDICTED: fimbrin-1-like isoform X2 [Nicotiana sylvestris]
JMSF006C11Sequence284000608 (4)ref|XP_004167407.1|3e-15PREDICTED: fimbrin-like protein 2-like, partial [Cucumis sativus]321012215 (3)
JMSF007C16Sequence299000608 (4)ref|XP_004167407.1|1e-06PREDICTED: fimbrin-like protein 2-like, partial [Cucumis sativus]814008433 (4)emb|CDP13763.1|2e-35unnamed protein product [Coffea canephora]
JMSF013K10Sequence545000608 (4)ref|XP_009784172.1|7e-48PREDICTED: fimbrin-1-like isoform X2 [Nicotiana sylvestris]676008433 (4)emb|CDP13763.1|2e-04unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS010B06+                             TTAAGAATGGATCATCTCTGAGATAGCTGTTGATATGAGCAA
                      ____________________________________________________________
consensus                               TTAAGAATGGATCATCTCTGAGATAGCTGTTGATATGAGCAA
 
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JMFS010B06+           CATATGATGCCTTCTCTGATTCACTGATTGTGTGAAGTAGGGTGGTTGTAGTGGCCTTGA
JMSF013K10+                                                                  CTTGA
                      ____________________________________________________________
consensus             CATATGATGCCTTCTCTGATTCACTGATTGTGTGAAGTAGGGTGGTTGTAGTGGCCTTGA
 
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JMFS010B06+           GGAATGAGGAAGGGCTTCTCGAACTACCTGATTTGGATGCAGTTCGGTTTTGCAAGTTCA
JMSF013K10+           GGAATGAGGAAGGGCTTCTCGAACTACCTGATTTGGATGCAGTTCGGTTTTGCAAGTTCA
                      ____________________________________________________________
consensus             GGAATGAGGAAGGGCTTCTCGAACTACCTGATTTGGATGCAGTTCGGTTTTGCAAGTTCA
 
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JMFS010B06+           AGTATGTCCTGAGAAAGCCCTCAAAATCAACCTCATCATTGATATCAGAACCAGATTCTC
JMSF013K10+           AGTATGTCCTGAGAAAGCCCTCAAAATCAACCTCATCATTGATATCAGAACCAGATTCTC
                      ____________________________________________________________
consensus             AGTATGTCCTGAGAAAGCCCTCAAAATCAACCTCATCATTGATATCAGAACCAGATTCTC
 
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JMFS010B06+           CCAAAATGTTCCTAATCTCCTCCTCATTGAACATTTCACTAAAAGCCTTCAGTTTCGCCA
JMSF013K10+           CCAAAATGTTCCTAATCTCCTCCTCATTGAACATTTCACTAAAAGCCTTCAGTTTCGCCA
                      ____________________________________________________________
consensus             CCAAAATGTTCCTAATCTCCTCCTCATTGAACATTTCACTAAAAGCCTTCAGTTTCGCCA
 
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JMFS010B06+           TTAAAGGCGGCAAATCGCCAATTGTAACTTTGCCATTCTGATTCTTCACAAAAATGAATT
JMSF006C11+                             CAATTGTAACTTTGCCATTCTGATTCTTCACAAAAATGAATT
JMSF013K10+           TTAAAGGCGGCAAATCGCCAATTGTAACTTTGCCATTCTGATTCTTCACAAAAATGAATT
                      ____________________________________________________________
consensus             TTAAAGGCGGCAAATCGCCAATTGTAACTTTGCCATTCTGATTCTTCACAAAAATGAATT
 
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JMFS010B06+           TGGATTTGAGACTGCGAAGCTCGACTTGCGTGAACTGGCTCTGAAGCCATTGATCAGACA
JMSF006C11+           TGGATTTGAGACTGCGAAGCTCGACTTGCGTGAACTGGCTCTGAAGCCATTGATCAGACA
JMSF013K10+           TGGATTTGAGACTGCGAAGCTCGACTTGCGTGAACTGGCTCTGAAGCCATTGATCAGACA
JMSF007C16+                TTGAGACTGCGAAGCTCGACTTGCGTGAACTGGCTCTGAAGCCATTGATCAGACA
                      ____________________________________________________________
consensus             TGGATTTGAGACTGCGAAGCTCGACTTGCGTGAACTGGCTCTGAAGCCATTGATCAGACA
 
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JMFS010B06+           CGAGAACACCCTGAAAACTCGACATCTCCTCAGTCCCCGAATCTCGGGGAACACGAAATC
JMSF006C11+           CGAGAACACCCTGAAAACTCGACATCTCCTCAGTCCCCGAATCTCGGGGAACACGAAATC
JMSF013K10+           CGAGAACACCCTGAAAACTCGACATCTCCTCAGTCCCCGAATCTCGGGGAACACGAAATC
JMSF007C16+           CGAGAACACCCTGAAAACTCGACATCTCCTCAGTCCCCGAATCTCGGGGAACACGAAATC
                      ____________________________________________________________
consensus             CGAGAACACCCTGAAAACTCGACATCTCCTCAGTCCCCGAATCTCGGGGAACACGAAATC
 
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JMFS010B06+           AAACTCACTCAATCAAAGCCCAATCCAGCACGTACCTTGAGGAAAATCAAGGTGGGTGCT
JMSF006C11+           AAACTCACTCAATCAAAGCCCAAT----------CCTTGAGGAAAATCAAGGTGGGTGCT
JMSF013K10+           AAACTCACTCAATCAAAGCCCAATCCAGCACGTACCTTGAGGAAAATCAAGGTGGGTGCT
JMSF007C16+           AAACTCACTCAATCAAAGCCCAATCCAGCACGTACCTTGAGGAAAATCAAGGTGGGTGCT
                      ____________________________________________________________
consensus             AAACTCACTCAATCAAAGCCCAATCCAGCACGTACCTTGAGGAAAATCAAGGTGGGTGCT
 
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JMFS010B06+           GAGTTTATTCAACGTTTTGACTGTTTTGTCAAGGAGAGAGACAGGGAGAAAGAGAAATGA
JMSF006C11+           GAGTTTATTCAACGTTTTGACTGTTTTGTCAAGGAGAGAGACAGGGAGAAAGAGAAATGA
JMSF013K10+           GAGTTTATTCAACGTTTTGACTGTTTTGTCAAGGAGAGAGACAGGGAGAAAGAGAAATGA
JMSF007C16+           GAGTTTATTCAACGTTTTGACTGTTTTGTCAAGGAGAGAGACAGGGAGAAAGAGAAATGA
                      ____________________________________________________________
consensus             GAGTTTATTCAACGTTTTGACTGTTTTGTCAAGGAGAGAGACAGGGAGAAAGAGAAATGA
 
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JMFS010B06+           ATGG                                                        
JMSF006C11+           ATGGATCGAGT                                                 
JMSF013K10+           ATGGATCGAGTATCGCTTAATTGCTTGAACACAGAGCAAAAACATAGGGGAGAAGAGATC
JMSF007C16+           ATGGATCGAGTATCGCTTAATTGCTTGAACACAGAGCAAAAACATAGGGGAGAAGAGATC
                      ____________________________________________________________
consensus             ATGGATCGAGTATCGCTTAATTGCTTGAACACAGAGCAAAAACATAGGGGAGAAGAGATC