| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031M22 | Sequence | 615 | 000605 (8) | ref|XP_006355724.1| | 8e-56 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] | 570 | 000605 (8) | ref|XP_006355724.1| | 5e-56 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] |
| JMFN011C01 | Sequence | 577 | 000605 (8) | ref|XP_006355724.1| | 5e-56 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] | |||||
| JMFN037N17 | Sequence | 570 | 000605 (8) | ref|XP_006355724.1| | 5e-56 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] | |||||
| JMFN039O06 | Sequence | 577 | 000605 (8) | ref|XP_006355724.1| | 5e-56 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] | |||||
| JMFN042D18 | Sequence | 297 | 000605 (8) | ref|XP_006355724.1| | 2e-40 | PREDICTED: probable protein Pop3-like [Solanum tuberosum] | |||||
| JMSF006L24 | Sequence | 360 | 000605 (8) | ref|XP_004239884.1| | 1e-48 | PREDICTED: probable protein Pop3 [Solanum lycopersicum] | 367 | 000605 (8) | ref|XP_011071353.1| | 3e-25 | PREDICTED: probable protein Pop3 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFF031M22+ TTTTTTTTTTGCCGGTTG
____________________________________________________________
consensus TTTTTTTTTTGCCGGTTG
. : . : . : . : . : . :
JMFN039O06+ GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFN011C01+ GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
rJMFF031M22- AATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFN037N17+ GACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
rJMSF006L24- GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFF031M22+ AATAACTAGGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
____________________________________________________________
consensus AATAACTAGGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
. : . : . : . : . : . :
JMFN039O06+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
JMFN011C01+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
rJMFF031M22- ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
JMFN037N17+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
rJMSF006L24- ACAGATATTACACTAATGCAAAACACAGCTCACCATTGAACTCNAAACAAAAGTGTTTCA
JMFF031M22+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
____________________________________________________________
consensus ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
. : . : . : . : . : . :
JMFN039O06+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFN011C01+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
rJMFF031M22- AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFN037N17+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
rJMSF006L24- AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFF031M22+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
____________________________________________________________
consensus AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
. : . : . : . : . : . :
JMFN039O06+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
JMFN011C01+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
rJMFF031M22- TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
JMFN037N17+ TACTCACTTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
rJMSF006L24- TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAATTTTCTCCAAT
JMFF031M22+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
____________________________________________________________
consensus TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
. : . : . : . : . : . :
JMFN039O06+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN011C01+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
rJMFF031M22- TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN037N17+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
rJMSF006L24- TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCANCA
JMFF031M22+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN042D18+ TCGGGGTGAGCAAGGTAGTCAGCAACA
JMSF006L24+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
____________________________________________________________
consensus TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
. : . : . : . : . : . :
JMFN039O06+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN011C01+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
rJMFF031M22- CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN037N17+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
rJMSF006L24- CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFF031M22+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN042D18+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMSF006L24+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
____________________________________________________________
consensus CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
. : . : . : . : . : . :
JMFN039O06+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN011C01+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
rJMFF031M22- ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN037N17+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
rJMSF006L24- ATGCTTACNTCTTTA
JMFF031M22+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN042D18+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMSF006L24+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
____________________________________________________________
consensus ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
. : . : . : . : . : . :
JMFN039O06+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN011C01+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
rJMFF031M22- GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN037N17+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFF031M22+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN042D18+ GCGTATGGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMSF006L24+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
____________________________________________________________
consensus GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
. : . : . : . : . : . :
JMFN039O06+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN011C01+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCAGCCATTAAACTTCCC
rJMFF031M22- AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN037N17+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFF031M22+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN042D18+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMSF006L24+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
____________________________________________________________
consensus AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
. : . : . : . : . : . :
JMFN039O06+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGA
JMFN011C01+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTC
rJMFF031M22- TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGT
JMFN037N17+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGA
JMFF031M22+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGT
JMFN042D18+ TTTCCCTCTTCTCACCGCAACAAGACTTTG
JMSF006L24+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGTCAACTCA
____________________________________________________________
consensus TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGTCAACTCA