Contig 000605:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031M22Sequence615000605 (8)ref|XP_006355724.1|8e-56PREDICTED: probable protein Pop3-like [Solanum tuberosum]570000605 (8)ref|XP_006355724.1|5e-56PREDICTED: probable protein Pop3-like [Solanum tuberosum]
JMFN011C01Sequence577000605 (8)ref|XP_006355724.1|5e-56PREDICTED: probable protein Pop3-like [Solanum tuberosum]
JMFN037N17Sequence570000605 (8)ref|XP_006355724.1|5e-56PREDICTED: probable protein Pop3-like [Solanum tuberosum]
JMFN039O06Sequence577000605 (8)ref|XP_006355724.1|5e-56PREDICTED: probable protein Pop3-like [Solanum tuberosum]
JMFN042D18Sequence297000605 (8)ref|XP_006355724.1|2e-40PREDICTED: probable protein Pop3-like [Solanum tuberosum]
JMSF006L24Sequence360000605 (8)ref|XP_004239884.1|1e-48PREDICTED: probable protein Pop3 [Solanum lycopersicum]367000605 (8)ref|XP_011071353.1|3e-25PREDICTED: probable protein Pop3 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF031M22+ TTTTTTTTTTGCCGGTTG
                      ____________________________________________________________
consensus TTTTTTTTTTGCCGGTTG
 
. : . : . : . : . : . :
JMFN039O06+ GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFN011C01+ GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
rJMFF031M22- AATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFN037N17+ GACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
rJMSF006L24- GGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
JMFF031M22+ AATAACTAGGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
                      ____________________________________________________________
consensus AATAACTAGGACAAATAAAGCCCATCAAATTATTAAAAGAGTAATAGAGCCAGAATCCAT
 
. : . : . : . : . : . :
JMFN039O06+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
JMFN011C01+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
rJMFF031M22- ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
JMFN037N17+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
rJMSF006L24- ACAGATATTACACTAATGCAAAACACAGCTCACCATTGAACTCNAAACAAAAGTGTTTCA
JMFF031M22+ ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
                      ____________________________________________________________
consensus ACAGATATTACACTAATGCAAAACACAG-TCACCATTGAACTCAAAACAAAAGTGTTTCA
 
. : . : . : . : . : . :
JMFN039O06+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFN011C01+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
rJMFF031M22- AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFN037N17+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
rJMSF006L24- AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
JMFF031M22+ AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
                      ____________________________________________________________
consensus AGAATTCCAAGCTTCATAGCTGATGAGAGCAAGCAAACCTCATATTCTCTTTCTGCAAAT
 
. : . : . : . : . : . :
JMFN039O06+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
JMFN011C01+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
rJMFF031M22- TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
JMFN037N17+ TACTCACTTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
rJMSF006L24- TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAATTTTCTCCAAT
JMFF031M22+ TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
                      ____________________________________________________________
consensus TACTCAACTCAGAGCTGGACTGGTGCAGGCTTGTAGTCAATGATGAGAACTTTCTCCAAT
 
. : . : . : . : . : . :
JMFN039O06+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN011C01+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
rJMFF031M22- TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN037N17+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
rJMSF006L24- TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCANCA
JMFF031M22+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
JMFN042D18+ TCGGGGTGAGCAAGGTAGTCAGCAACA
JMSF006L24+ TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
                      ____________________________________________________________
consensus TGCGGAAGGAGTTTGTTCGCGTACTCAACATGATCGGGGTGAGCAATGTACTCAGCAACA
 
. : . : . : . : . : . :
JMFN039O06+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN011C01+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
rJMFF031M22- CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN037N17+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
rJMSF006L24- CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFF031M22+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMFN042D18+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
JMSF006L24+ CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
                      ____________________________________________________________
consensus CCTTCACAGCTCTCGAAACTCGATTCAAACACATGAGTGAAGCCTTGGTGAAGGTTCTCT
 
. : . : . : . : . : . :
JMFN039O06+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN011C01+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
rJMFF031M22- ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN037N17+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
rJMSF006L24- ATGCTTACNTCTTTA
JMFF031M22+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMFN042D18+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
JMSF006L24+ ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
                      ____________________________________________________________
consensus ATGCTTACATCTTTACCCCAGCGGAAAGACTTCATGGGTTGGATGAGATTGACGAGATTA
 
. : . : . : . : . : . :
JMFN039O06+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN011C01+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
rJMFF031M22- GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN037N17+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFF031M22+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMFN042D18+ GCGTATGGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
JMSF006L24+ GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
                      ____________________________________________________________
consensus GCGTATTGTTTGATAAGCTGATCGATCTCTTCTTGGGGGATCCCATCTTTGAACTTGCCC
 
. : . : . : . : . : . :
JMFN039O06+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN011C01+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCAGCCATTAAACTTCCC
rJMFF031M22- AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN037N17+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFF031M22+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMFN042D18+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
JMSF006L24+ AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
                      ____________________________________________________________
consensus AGCACAATGTGCTTCACTTCTCCTCCTTTAGATGCCTCACCGTCCGCCATTAAACTTCCC
 
. : . : . : . : . : . :
JMFN039O06+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGA
JMFN011C01+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTC
rJMFF031M22- TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGT
JMFN037N17+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGA
JMFF031M22+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGT
JMFN042D18+ TTTCCCTCTTCTCACCGCAACAAGACTTTG
JMSF006L24+ TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGTCAACTCA
                      ____________________________________________________________
consensus TTTCCCTCTTCTCACCGCAACAAGACTTTGGTGGATCGGAGTCTATCAAGTGTCAACTCA