| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006F22 | Sequence | 557 | 000602 (4) | emb|CDO99362.1| | 7e-64 | unnamed protein product [Coffea canephora] | 449 | 005494 (3) | ref|XP_004147178.1| | 64.7 | PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus] ref|XP_0041667 |
| JMFF042A10 | Sequence | 655 | 000602 (4) | emb|CDO99362.1| | 7e-86 | unnamed protein product [Coffea canephora] | 309 | 005494 (3) | |||
| JMSF006I07 | Sequence | 329 | 000602 (4) | ref|XP_009602795.1| | 1e-39 | PREDICTED: ammonium transporter 1 member 2 [Nicotiana tomentosiformis] | 388 | 008691 (2) | ref|XP_006340472.1| | 88.2 | PREDICTED: ammonium transporter 1 member 2-like [Solanum tuberosum] |
| JMSF030P02 | Sequence | 642 | 000602 (4) | ref|XP_006340957.1| | 173 | PREDICTED: ammonium transporter 1 member 1-like, partial [Solanum tuberosum] | 461 | 005494 (3) | ref|XP_006420410.1| | 3e-28 | hypothetical protein CICLE_v10004812mg [Citrus clementina] gb|ESR33650.1| hypoth |
This contig is upended
. : . : . : . : . : . :
JMSF030P02+ CCAAGAGCCCGTTGCACACGTCCGTCACGTTCCAATGCCCGGACAGA
____________________________________________________________
consensus CCAAGAGCCCGTTGCACACGTCCGTCACGTTCCAATGCCCGGACAGA
. : . : . : . : . : . :
JMSF030P02+ ATCCTTTTTCCGAACAACGTCGTCAGCGCCGCCGTGCATCCGGCTAAAGTGGTGGTCACG
____________________________________________________________
consensus ATCCTTTTTCCGAACAACGTCGTCAGCGCCGCCGTGCATCCGGCTAAAGTGGTGGTCACG
. : . : . : . : . : . :
JMSF030P02+ GCGGTCCGCCCCACCGCGCTCCATTGCCCGTAGCTGCCGCCGACGGCGGCGTCGGGATAC
____________________________________________________________
consensus GCGGTCCGCCCCACCGCGCTCCATTGCCCGTAGCTGCCGCCGACGGCGGCGTCGGGATAC
. : . : . : . : . : . :
JMSF030P02+ GTGACTAAAATTTTGTTAAACGAACCGGGGTTAAACCCGTACCACCCGAACCATAACAGA
____________________________________________________________
consensus GTGACTAAAATTTTGTTAAACGAACCGGGGTTAAACCCGTACCACCCGAACCATAACAGA
. : . : . : . : . : . :
JMSF030P02+ AAGGTTCCTAAAACTACTAACGAAGCACTATGGCCACGAAGCGCCACGGACCTTCAATGA
____________________________________________________________
consensus AAGGTTCCTAAAACTACTAACGAAGCACTATGGCCACGAAGCGCCACGGACCTTCAATGA
. : . : . : . : . : . :
JMSF030P02+ GTGCTCCGTATAAACCGGCGATTCCGCCCACCATATGAACCACGCCCGAACCGGCGAAGT
JMFF042A10+ GT
____________________________________________________________
consensus GTGCTCCGTATAAACCGGCGATTCCGCCCACCATATGAACCACGCCCGAACCGGCGAAGT
. : . : . : . : . : . :
JMSF030P02+ CAATAACTCCGGTTCCGAATAAGAGATTGTTGTTGTTAAACGCGCTGGCCCAACCGTCAA
JMFF042A10+ CAATAACTCCGGTTCCGAATAAGAGATTGTTGTTGTTAAACGCGCTGGCCCAACCGTCAA
____________________________________________________________
consensus CAATAACTCCGGTTCCGAATAAGAGATTGTTGTTGTTAAACGCGCTGGCCCAACCGTCAA
. : . : . : . : . : . :
JMSF030P02+ CGGACCAGAACCAGTGGGAGACGACCGGGTAAACAAAACCGGTGAGGAAAGCCGAGTAGA
JMFF006F22+ AAACCGGTGAGGAAAGCCGAGTAGA
JMFF042A10+ CGGACCAGAACCAGTGGGAGACGACCGGGTAAACAAAACCGGTGAGGAAAGCCGAGTAGA
____________________________________________________________
consensus CGGACCAGAACCAGTGGGAGACGACCGGGTAAACAAAACCGGTGAGGAAAGCCGAGTAGA
. : . : . : . : . : . :
JMSF030P02+ TGAGATAAGCCACGAACTGGGTCCGCTCGGCTATGGAGCCGCTGGTGATGCCGGCGGCGG
JMFF006F22+ TGAGATAAGCCACGAACTGGGTCCGCTCGGCTATGGAGCCGCTGGTGATGCCGGCGGCGG
JMFF042A10+ TGAGATAAGCCACGAACTGGGTCCGCTCGGCTATGGAGCCGCTGGTGATGCCGGCGGCGG
____________________________________________________________
consensus TGAGATAAGCCACGAACTGGGTCCGCTCGGCTATGGAGCCGCTGGTGATGCCGGCGGCGG
. : . : . : . : . : . :
JMSF030P02+ CTATGGCGAAAGCCCATTGGTAAAGGAAGTTGCTGTAGTCGAGGGCGGCGGCGCCGTCGG
JMFF006F22+ CTATGGCGAAAGCCCATTGGTAAAGGAAGTTGCTGTAGTCGAGGGCGGCGGCGCCGTCGG
JMFF042A10+ CTATGGCGAAAGCCCATTGGTAAAGGAAGTTGCTGTAGTCGAGGGCGGCGGCGCCGTCGG
____________________________________________________________
consensus CTATGGCGAAAGCCCATTGGTAAAGGAAGTTGCTGTAGTCGAGGGCGGCGGCGCCGTCGG
. : . : . : . : . : . :
JMSF030P02+ GGATGTTCTTCAAGCCGAAGAAGTGGTGGCCGATGAAGCCGTTGGAATTTCCGCC
JMFF006F22+ GGATGTTCTTCAAGCCGAAGAAGTGGTGGCCGATGAAGCCGTTGGAATTTCCGCCGGTGC
JMFF042A10+ GGATGTTCTTCAAGCCGAAGAAGTGGTGGCCGATGAAGCCGTTGGAATTTCCGCCGGTGC
____________________________________________________________
consensus GGATGTTCTTCAAGCCGAAGAAGTGGTGGCCGATGAAGCCGTTGGAATTTCCGCCGGTGC
. : . : . : . : . : . :
JMFF006F22+ CGAAGGCGAAGGCGAAGCCGAAGAGGTAGTAGAAGAGGCCGCCGGCGGCGGCGTCGAGGA
JMFF042A10+ CGAAGGCGAAGGCGAAGCCGAAGAGGTAGTAGAAGAGGCCGCCGGCGGCGGCGTCGAGGA
JMSF006I07+ CCGGCGGCGGCGTCGAGGA
____________________________________________________________
consensus CGAAGGCGAAGGCGAAGCCGAAGAGGTAGTAGAAGAGGCCGCCGGCGGCGGCGTCGAGGA
. : . : . : . : . : . :
JMFF006F22+ CGTTGGTGAGCATGATGTTCATGGTGTTCTTGGCGCGGACGGAGCCGGCGCAGAGCATGG
JMFF042A10+ CGTTGGTGAGCATGATGTTCATGGTGTTCTTGGCGCGGACGGAGCCGGCGCAGAGCATGG
JMSF006I07+ CGTTGGTGAGCATAATGTTCATGGTGTTCTTGGCGCGGACGGAGCCGGCGCAGAGCATGG
____________________________________________________________
consensus CGTTGGTGAGCATGATGTTCATGGTGTTCTTGGCGCGGACGGAGCCGGCGCAGAGCATGG
. : . : . : . : . : . :
JMFF006F22+ CGAAGCCGAGCTGCATGGAGAAGACTAAGTAAGCGGAGAAGAGGAG
JMFF042A10+ CGAAGCCGAGCTGCATGGAGAAGACTAAGTAAGCGGAGAAGAGGAG
JMSF006I07+ CGAACCCCAGCTGCATGGCGAACACCAGGTAGGCGGAGAAGAGGAGGTACGTGTTGTCCA
____________________________________________________________
consensus CGAAGCCGAGCTGCATGGAGAAGACTAAGTAAGCGGAGAAGAGGAGGTACGTGTTGTCCA
. : . : . : . : . : . :
JMSF006I07+ CCGCGAATTTCGTGGCCGTCAGTTGGGCGGAGAAGGCCGTCAACTGGCCGCAGATGAAGT
____________________________________________________________
consensus CCGCGAATTTCGTGGCCGTCAGTTGGGCGGAGAAGGCCGTCAACTGGCCGCAGATGAAGT
. : . : . : . : . : . :
JMSF006I07+ TCGCCGCACCCGTCGCGTTCACGGCTCCGCCCAGAAGTGGGCTGAGCTCGGAGGCGGAGC
____________________________________________________________
consensus TCGCCGCACCCGTCGCGTTCACGGCTCCGCCCAGAAGTGGGCTGAGCTCGGAGGCGGAGC
. : . : . : . : . : . :
JMSF006I07+ AGCTCAAAGAGGCCATAGTTGTCGAAGAAATTAAAGGCTTTGGAAGTGGAACTAAATATG
____________________________________________________________
consensus AGCTCAAAGAGGCCATAGTTGTCGAAGAAATTAAAGGCTTTGGAAGTGGAACTAAATATG