Contig 000599:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS104F08Sequence609000599 (2)ref|XP_006338262.1|219PREDICTED: uncharacterized protein LOC102606344 [Solanum tuberosum]
JMSF006E17Sequence466000599 (2)364006938 (6)ref|XP_009767908.1|3e-19PREDICTED: ras-related protein RABA5b-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS104F08+                               AAAGTCCAGCCTTCTTCTTGGCGTGCCTACTAGAGATTTT
                      ____________________________________________________________
consensus                                 AAAGTCCAGCCTTCTTCTTGGCGTGCCTACTAGAGATTTT
 
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JMFS104F08+           AGTTTGTCGTCAATTCTGGAAGGTGATGAGGTTGAGATTTGCTGATCAAACGCTTTTCGG
                      ____________________________________________________________
consensus             AGTTTGTCGTCAATTCTGGAAGGTGATGAGGTTGAGATTTGCTGATCAAACGCTTTTCGG
 
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JMFS104F08+           TATAGTGAAAGGAGGTACTGTTCCAAATGCCCAACTTCGAACTCTAGTACAGCTATTTCT
                      ____________________________________________________________
consensus             TATAGTGAAAGGAGGTACTGTTCCAAATGCCCAACTTCGAACTCTAGTACAGCTATTTCT
 
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JMFS104F08+           CGAATCAGTTCTGTGGCCGGCTTAGGTATCGAGATTTCATCTGCGGTCTTCTGGCATGTA
                      ____________________________________________________________
consensus             CGAATCAGTTCTGTGGCCGGCTTAGGTATCGAGATTTCATCTGCGGTCTTCTGGCATGTA
 
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JMFS104F08+           GACCGATACCCTAACGCTTTCTCTAGAGCACATCGGACAGCAACTTGGGTCTGCAATCGT
                      ____________________________________________________________
consensus             GACCGATACCCTAACGCTTTCTCTAGAGCACATCGGACAGCAACTTGGGTCTGCAATCGT
 
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JMFS104F08+           TTCTCGAGTTGCATTATCTCTTGCGTTAATGAACTTTGGACCTCGGCAGTAGATGATTGT
                      ____________________________________________________________
consensus             TTCTCGAGTTGCATTATCTCTTGCGTTAATGAACTTTGGACCTCGGCAGTAGATGATTGT
 
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JMFS104F08+           TTCTTCTTGCTCTCGAAGCAATCATCTGAGTGCTCCATATCCAACTTCAATTCAGGGGAA
JMSF006E17+                         GAAGCAATCATNTGAGTGCTCCATATCCAACTTCAATTCAGGGGAA
                      ____________________________________________________________
consensus             TTCTTCTTGCTCTCGAAGCAATCATCTGAGTGCTCCATATCCAACTTCAATTCAGGGGAA
 
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JMFS104F08+           GCCTCGGGGGAACAACGAAAACTATCATGTCCAGTTTTTACGCTATCTGGAAAGCTCTTA
JMSF006E17+           GCCTCGGGGGAACAACGAAAACTATCATGTCCAGTTTTTACGCTATCTGGAAAGCTCTTA
                      ____________________________________________________________
consensus             GCCTCGGGGGAACAACGAAAACTATCATGTCCAGTTTTTACGCTATCTGGAAAGCTCTTA
 
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JMFS104F08+           GAACGCTTGTGTGTACAGGTTCTCATAGCCGCCCCAGGGGATTCATCGAAGCTAAACCCT
JMSF006E17+           GAACGCTTGTGTGTACAGGTTCTCATAGCCGCCCCAGGGGATTCATCGAAGCTAAACCCT
                      ____________________________________________________________
consensus             GAACGCTTGTGTGTACAGGTTCTCATAGCCGCCCCAGGGGATTCATCGAAGCTAAACCCT
 
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JMFS104F08+           TCAAACCCCATCACT                                             
JMSF006E17+           TCAAACCCCATCACTCAACATTACAAGCCTATAAGCAAAGAAATCAGCTACCAAGATTGG
                      ____________________________________________________________
consensus             TCAAACCCCATCACTCAACATTACAAGCCTATAAGCAAAGAAATCAGCTACCAAGATTGG
 
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JMSF006E17+           ATTTTTCCGACCGACCCAGAAGTCCCAGATGCTCAAAAACATCCAACGGGTCCTCGAAAA
                      ____________________________________________________________
consensus             ATTTTTCCGACCGACCCAGAAGTCCCAGATGCTCAAAAACATCCAACGGGTCCTCGAAAA
 
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JMSF006E17+           CCACAACTTGGAATCAAGACCCCACCTTTCTCCCTTGCATTGTTCGAAACACCCAAGTTA
                      ____________________________________________________________
consensus             CCACAACTTGGAATCAAGACCCCACCTTTCTCCCTTGCATTGTTCGAAACACCCAAGTTA
 
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JMSF006E17+           ATTAGCGAACCCGGCAACGATTTCTTGCGTTTTTCACTGCCACACCCAAATTGACAAGGC
                      ____________________________________________________________
consensus             ATTAGCGAACCCGGCAACGATTTCTTGCGTTTTTCACTGCCACACCCAAATTGACAAGGC
 
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JMSF006E17+           AATAAACTAGTACAAATAGTTCACAGTCCCAATAGAGTAATGCCAACCCATACCACCACC
                      ____________________________________________________________
consensus             AATAAACTAGTACAAATAGTTCACAGTCCCAATAGAGTAATGCCAACCCATACCACCACC