Contig 000597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038F24Sequence550000597 (10)ref|XP_010321834.1|3e-96PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 is743000597 (10)emb|CDP03649.1|3e-80unnamed protein product [Coffea canephora]
JMFN012N19Sequence627000597 (10)emb|CDP03649.1|3e-66unnamed protein product [Coffea canephora]
JMFN019K15Sequence625000597 (10)emb|CDP03649.1|2e-101unnamed protein product [Coffea canephora]
JMFS022H06Sequence612000597 (10)ref|XP_004240516.1|2e-110PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 is
JMSF005C05Sequence344000597 (10)ref|XP_006366671.1|5e-53PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-li434000597 (10)ref|XP_011079877.1|2e-27PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 is
JMSF006C05Sequence340000597 (10)ref|XP_009605215.1|8e-52PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 {E
JMSF010M15Sequence253000597 (10)ref|XP_009759038.1|3e-34PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 is746000597 (10)emb|CDP03649.1|2e-88unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN012N19+                                                                   ACAA
rJMFF038F24-                   TGAAGCAAAACCAAGGTAATAAAACACTGTTCCAACTAGTTTTTACAACAA
                      ____________________________________________________________
consensus                      TGAAGCAAAACCAAGGTAATAAAACACTGTTCCAACTAGTTTTTACAACAA
 
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JMFN012N19+           TTATCATCAGAAGACAATGCCAAATTGCAAAATCAGCAGCCTTCCATCTTTATAGAACAA
rJMSF005C05-          TTATCATCAGAAGACAATGCCAAATTGCANAATCNGCAGCCTTCCATCTTTATAGAACAA
rJMFF038F24-          TTATCATCAGAAGACAATGCCAAATTGCAAAATCAGCAGCCTTCCATCTTTATAGAACAA
rJMSF010M15-          TTATCATCAGAAGACAATGCCAAATTGCAAAATCAGCAGCCTTCCATCTTTATAGAACAA
                      ____________________________________________________________
consensus             TTATCATCAGAAGACAATGCCAAATTGCAAAATCAGCAGCCTTCCATCTTTATAGAACAA
 
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JMFN012N19+           GAAATAATATTATCTACTTTTTCTTGTCGTTCCTGCCTCGCTTTCTGAATTCCCGTCTCT
rJMSF005C05-          GAAATAATATTATCTACTTTTTCTTGTCGGTCCTGCCTCGCTTTCTGAATTCCCGTCTCT
rJMFF038F24-          GAAATAATATTATCTACTTTTTCTTGTCGTTCCTGCCTCGCTTTCTGAATTCCCGTCTCT
rJMSF010M15-          GAAATAATATTATCTACTTTTTCTTGTCGTTCCTGCCTCGCTTTCTGAATTCCCGTCTCT
                      ____________________________________________________________
consensus             GAAATAATATTATCTACTTTTTCTTGTCGTTCCTGCCTCGCTTTCTGAATTCCCGTCTCT
 
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JMFN012N19+           CTGAAGAGTACTGCTTCTTGATCAAGAGATTTCGCATTGCTGTCTTGACTGCTTCAGCGG
rJMSF005C05-          CTGAAGAGTACTGCTTCTTGATCAAGAGATTTCGCATTGCTGTCTTGACTGCTTCAGCGG
rJMFF038F24-          CTGAAGAGTACTGCTTCTTGATCAAGAGATTTCGCATTGCTGTCTTGACTGCTTCAGCGG
rJMSF010M15-          CTGAAGAGTACTGCTTCTTGATCAAGAGATTTCGCATTGCTGTCTTGACTGCTTCAGCGG
                      ____________________________________________________________
consensus             CTGAAGAGTACTGCTTCTTGATCAAGAGATTTCGCATTGCTGTCTTGACTGCTTCAGCGG
 
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JMFN012N19+           CTGTTAAGAAGACTTCGGTTTTTATACACAAATCTCCTTGCAATTTCTGGAGCATTGCTT
rJMSF005C05-          CTGTTAAGAAGACTTCGGTTTTTATACACAAATCTCCTTGCNATTTCTGGAGCATTGCTT
rJMFF038F24-          CTGTTAAGAAGACTTCGGTTTTTATACACAAATCTCCTTGCAATTTCTGGAGCATTGCTT
rJMSF010M15-          CTGTTAAGAAGACTTCGGTTTTTATACACAAATCTCCTTGCAATTTCTGGAGCATTGCTT
                      ____________________________________________________________
consensus             CTGTTAAGAAGACTTCGGTTTTTATACACAAATCTCCTTGCAATTTCTGGAGCATTGCTT
 
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JMFN012N19+           CTCCCCCCGGTACGTCTTTATCTTCTAAAAAAGATGGTTCTTGATCGGTAGAGCCTTGGT
rJMSF005C05-          CTCCCCCCGGTACGTCTTTATCTTCTAAAAAAGATGGTTCTTGATCGGTAGAGCCTTGGT
rJMFF038F24-          CTCCCCCCGGTACGTCTTTATCTTCTAAAAAAGATGGTTCTTGATCGGTAGAGCCTTGGT
rJMSF010M15-          CTCCCCCCGGTACGTCTTTATCTTCTAAAAAAGATGGTTCTTGATCGGTAGAGCCTTGGT
                      ____________________________________________________________
consensus             CTCCCCCCGGTACGTCTTTATCTTCTAAAAAAGATGGTTCTTGATCGGTAGAGCCTTGGT
 
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JMFN012N19+           TGGTCTTCCCGAAACCAGAGAGGACCCTCACGCGTGCCAAAGATCCTGATTCCGAAGCAT
rJMSF005C05-          TGGTCTTCCCGAAACCAGAGAGGACCCTCACGCGTGTC-AAGATCCTGATTCCGAANCAT
rJMFF038F24-          TGGTCTTCCCGAAACCAGAGAGGACCCTCACGCGTGCCAAAGATCCTGATTCCGAAGCAT
rJMSF010M15-          TGGTCTTCCCGAAACCAGAGAGGACCCTCACGCGTGCCAAAGATCCTGATTCCGAAGCAT
JMFN019K15+                                GGACCCTCACGCGTGCCAAAGATCCTGATTCCGAAGCAT
                      ____________________________________________________________
consensus             TGGTCTTCCCGAAACCAGAGAGGACCCTCACGCGTGCCAAAGATCCTGATTCCGAAGCAT
 
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JMFN012N19+           TTAAACTCGAGACACCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCCCA
rJMSF005C05-          TNAAACTCGAGACANCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCC  
rJMFF038F24-          TTAAACTCGAGACACCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCCCA
rJMSF010M15-          TTAAACTCGAGACACCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCCCA
JMFN019K15+           TTAAACTCGAGACACCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCCCA
                      ____________________________________________________________
consensus             TTAAACTCGAGACACCCATGACCAGCCATAATAACCCTGCTGAGGTAGCTCCCGCTCCCA
 
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JMFN012N19+           AGCTCGTGGGAATGAAAGTCTCCCCATCAATTCGCACCACTTTGAAAACAGAGAGACTTT
rJMFF038F24-          AGCTCGTGGGAATGAAAGTCTCCCCATCAATTCGCACCACTTTGAAAACAGAGAGACTTT
rJMSF010M15-          AGCTCGTGGGAATGAAAGTCTCCCCATCAATTCGCACCACTTTGAAAACAGAGAGACTTT
JMFN019K15+           AGCTCGTGGGAATGAAAGTCTCCCCATCAATTCGCACCACTTTGAAAACAGAGAGACTTT
                      ____________________________________________________________
consensus             AGCTCGTGGGAATGAAAGTCTCCCCATCAATTCGCACCACTTTGAAAACAGAGAGACTTT
 
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JMFN012N19+           TCGTTGAAAGGTCACAGCTCAACAACATCACTCCCGGTAAGCTCTGAATGGCCACTGCAA
rJMFF038F24-          TCGTTGAAAGGTCACAGCTCAACAACATCACTCCCGGTAAGCTCTGAATGGCCACTGCAA
rJMSF010M15-          TCGTTGAAAGGTCACAGCTCAACAACATCACTCCCGGTAAGCTCTGAATGGCCACTGCAA
JMFN019K15+           TCGTTGAAAGGTCACAGCTCAACAACATCACTCCCGGTAAGCTCTGAATGGCCACTGCAA
                      ____________________________________________________________
consensus             TCGTTGAAAGGTCACAGCTCAACAACATCACTCCCGGTAAGCTCTGAATGGCCACTGCAA
 
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JMFN012N19+           CTAGAGATCCATCAGGCGTCGCACAGAGATCAGTGACAGCAGGAATAATATCTTCTTCGC
rJMFF038F24-          CTAGAGATCCATCAGGCGTCGCACAGAGATCAGTGACAGCAGGAATAATATCTTCTTCGC
rJMSF010M15-          CTAGAGATCCATCAGGCGTCGCACAGAGATCAGTGACAGCAGGAATAATATCTTCTTCGC
JMFN019K15+           CTAGAGATCCATCAGGCGTCGCACAGAGATCAGTGACAGCAGGAATAATATCTTCTTCGC
                      ____________________________________________________________
consensus             CTAGAGATCCATCAGGCGTCGCACAGAGATCAGTGACAGCAGGAATAATATCTTCTTCGC
 
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JMFN012N19+           CGCCATTTGACTCT                                              
rJMFF038F24-          CGCCATTTGACTCTGCAACTCCTGCCAATGATCCAACATGGCATGTGTCTAGAAGAGAAC
rJMSF010M15-          CGCCATTTGACTCTGCAACTCCTGCCAATGATCCAACATGGCATGTGTCTAGAAGAGAAC
JMFN019K15+           CGCCATTTGACTCTGCAACTCCTGCCAATGATCCAACATGGCATGTGTCTAGAAGAGAAC
JMFF038F24+           CGCCATTTGACTCTGCAACTCCTGCCAATGATCCAACATGGCATGTGTCTAGAAGAGAAC
                      ____________________________________________________________
consensus             CGCCATTTGACTCTGCAACTCCTGCCAATGATCCAACATGGCATGTGTCTAGAAGAGAAC
 
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rJMFF038F24-          CACAAGCATAGTCCCATAAGCGAATAGTTGAA                            
rJMSF010M15-          CACAAGCATAGTCCCATAAGCGAATAGTTGAATCACCACCTCCCGAGACTAGAAAACCCT
JMFN019K15+           CACAAGCATAGTCCCATAAGCGAATAGTTGAATCACCACCTCCCGAGACTAGAAAACCCT
JMFF038F24+           CACAAGCATAGTCCCATAAGCGAATAGTTGAATCACCACCTCCCGAGACTAGAAAACCCT
                      ____________________________________________________________
consensus             CACAAGCATAGTCCCATAAGCGAATAGTTGAATCACCACCTCCCGAGACTAGAAAACCCT
 
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rJMSF010M15-          GTGGAAAATCCGGAT                                             
JMFN019K15+           GTGGAAAATCCGGATTGCAAACAAAGGCAAGGCAGGTGACAAACTCGGTATGGCCGAGAC
JMFF038F24+           GTGGAAAATCCGGATTGCAAACAAAGGCAAGGCAGGTGACAAACTCGGTATGGCCGAGAC
JMFS022H06+                    CCGGATTGCAAACAAAGGCAAGGCAGGTGACAAACTCGGTATGGCCGAGAC
                      ____________________________________________________________
consensus             GTGGAAAATCCGGATTGCAAACAAAGGCAAGGCAGGTGACAAACTCGGTATGGCCGAGAC
 
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JMFN019K15+           AAAAGCTCTGAATCTCATGAGCTCCATTCAACGGGTTTTGGGGAAAGAGAGTAACTCGGA
JMFF038F24+           AAAAGCTCTGAATCTCATGAGCTCCATTCAACGGGTTTTGGGGAAAGAGAGTAACTCGGA
JMFS022H06+           AAAAGCTCTGAATCTCATGAGCTCCATTCAACGGGTTTTGGGGAAAGAGAGTAACTCGGA
                      ____________________________________________________________
consensus             AAAAGCTCTGAATCTCATGAGCTCCATTCAACGGGTTTTGGGGAAAGAGAGTAACTCGGA
 
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JMFN019K15+           TTTTGAAGTCCCGATCAGCACTAATGATAAATCGCCCATCTGGTGAAAACTCCAGGCTAG
JMFF038F24+           TTTTGAAGTCCCGATCAGCACTAATGATAAATCGCCCATCTGGTGAAAACTCCAGGCTAG
JMFS022H06+           TTTTGAAGTCCCGATCAGCACTAATGATAAATCGCCCATCTGGTGAAAACTCCAGGCTAG
                      ____________________________________________________________
consensus             TTTTGAAGTCCCGATCAGCACTAATGATAAATCGCCCATCTGGTGAAAACTCCAGGCTAG
 
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JMFN019K15+           TAATGATGCTGCAATAGTGGGAAAGAATTGGAACTGCCTTCTTATT              
JMFF038F24+           TAATGATGCTGCAATAGTGGGAAAGAATTGGAACTGCCTTCTTATTGGGAATATCTTGCT
JMFS022H06+           TAATGATGCTGCAATAGTGGGAAAGAATTGGAACTGCCTTCTTATTGGGAATATCTTGCT
                      ____________________________________________________________
consensus             TAATGATGCTGCAATAGTGGGAAAGAATTGGAACTGCCTTCTTATTGGGAATATCTTGCT
 
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JMFF038F24+           TTTCAGAACTCTCTATATCGGTTATATATACCATCCCAAATTTGTCTGCAAAGCACACAA
JMFS022H06+           TTTCAGAACTCTCTATATCGGTTATATATACCATCCCAAATTTGTCTGCAAAGCACACAA
                      ____________________________________________________________
consensus             TTTCAGAACTCTCTATATCGGTTATATATACCATCCCAAATTTGTCTGCAAAGCACACAA
 
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JMFF038F24+           AGCGACCATTCTTGCTTATAGCAACAGCACTAACTCTTTTCTCCGATAAAACAGAATGTG
JMFS022H06+           AGCGACCATTCTTGCTTATAGCAACAGCACTAACTCTTTTCTCCGATAAAACAGAATGTG
JMSF005C05+                               GCAACAGCACTAACTCTTTTCTCCGATAAAACAGAATGTG
JMSF006C05+                               GCAACAGCACTAACTCTTTTCTCCGATAAAACAGAATGTG
                      ____________________________________________________________
consensus             AGCGACCATTCTTGCTTATAGCAACAGCACTAACTCTTTTCTCCGATAAAACAGAATGTG
 
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JMFF038F24+           TACAACGCCAAGAATCAGTGACCCAAATCTTAACAAGCTTGTCATCCCCTGCAGATACGA
JMFS022H06+           TACAACGCCAAGAATCAGTGACCCAAATCTTAACAAGCTTGTCATCCCCTGCAGATACGA
JMSF005C05+           TACAACGCCAAGAATCAGTGACCCAAATCTTAACAAGCTTGTCATCCCCTGCAGATACGA
JMSF010M15+                                                          CCTGCAGATACGA
JMSF006C05+           TACAACGCCAAGAATCAGTGACCCAAATCTTAACAAGCTTGTCATCCCCTGCAGATACGA
                      ____________________________________________________________
consensus             TACAACGCCAAGAATCAGTGACCCAAATCTTAACAAGCTTGTCATCCCCTGCAGATACGA
 
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JMFF038F24+           ATAGCTTCCC                                                  
JMFS022H06+           ATAGCTTCCCTTCTGCTCCATATCGGATCGCTCTAATTGAATCCTTATGCTTGTTTCCTC
JMSF005C05+           ATAGCTTCCCTTCTGCTCCATATCGGATCGCTCTAATTGAATCCTTATGCTTGTTTCCTC
JMSF010M15+           ATAGCTTCCCTTCTGCTCCATATCGGATCGCTCTAATTGAATCCTTATGCTTGTTTCCTC
JMSF006C05+           ATAGCTTCCCTTCTGCTCCATATCGGATCGCTCTAATTGAATCCTTATGCTTGTTTCCTC
                      ____________________________________________________________
consensus             ATAGCTTCCCTTCTGCTCCATATCGGATCGCTCTAATTGAATCCTTATGCTTGTTTCCTC
 
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JMFS022H06+           CAGACTCATCCAGCAACGATACTGAATGACCTCGAAGATTGAAGACGCGGAGGTCCGAGC
JMSF005C05+           CAGACTCATCCAGCAACGATACTGAATGACCTCGAAGATTGAAGACGCGGAGGTCCGAGC
JMSF010M15+           CAGACTCATCCAGCAACGATACTGAATGACCTCGAAGATTGAAGACGCGGAGGTCCGAGC
JMSF006C05+           CAGACTCATCCAGCAACGATACTGAATGACCTCGAAGATTGAAGACGCGGAGGTCCGAGC
                      ____________________________________________________________
consensus             CAGACTCATCCAGCAACGATACTGAATGACCTCGAAGATTGAAGACGCGGAGGTCCGAGC
 
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JMFS022H06+           CAACAGCGACGGCAACCGATTCTTGGGTCGGATGAACTGCAATTAGTGCCGGAGCAGCCT
JMSF005C05+           CAACAGCGACGGCAACCGATTCTTGGGTCGGATGAACTGCAATTAGTGCCGGAGCAGCCT
JMSF010M15+           CAACAGCGACGGCAACCGATTCTTGGGTCGGATGAACTGCAATTAGTGCCGGAGCAGCCT
JMSF006C05+           CAACAGCGACGGCAACCGATTCTTGGGTCGGATGAACTGCAATTAGTGCCGGAGCAGCCT
                      ____________________________________________________________
consensus             CAACAGCGACGGCAACCGATTCTTGGGTCGGATGAACTGCAATTAGTGCCGGAGCAGCCT
 
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JMFS022H06+           CCGTTTCCCGGTTCTGCTCGT                                       
JMSF005C05+           CCGTTTCCCGGTTCTGCTCGTTATCATCCATGTTGGTTTCCTCCATTCCTTTGCAGA   
JMSF010M15+           CCGTTTCCCGGTTCTGCTCGTTATCATCCATGTTGGTTTCCTCCATTCCTTTGCAGA   
JMSF006C05+           CCGTTTCCCGGTTCTGCTCGTTATCATCCATGTTGGTTTCCTCCATTCCTTTGCAGAGCC
                      ____________________________________________________________
consensus             CCGTTTCCCGGTTCTGCTCGTTATCATCCATGTTGGTTTCCTCCATTCCTTTGCAGAGCC