| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006B06 | Sequence | 274 | 000596 (10) | ref|XP_009629822.1| | 1e-06 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | |||||
| JMSF013J04 | Sequence | 182 | 000596 (10) | 765 | 011398 (4) | ref|XP_009792971.1| | 5e-80 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] | |||
| JMSF015E07 | Sequence | 290 | 000596 (10) | ref|XP_009792971.1| | 1e-25 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] | 804 | 000596 (10) | ref|XP_009792971.1| | 1e-107 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] |
| JMSF019O14 | Sequence | 439 | 000596 (10) | ref|XP_009629822.1| | 1e-29 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | 608 | 011398 (4) | ref|XP_009792971.1| | 3e-48 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] |
| JMSF026C19 | Sequence | 538 | 000596 (10) | ref|XP_009629822.1| | 5e-44 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | |||||
| JMSF027E20 | Sequence | 541 | 000596 (10) | ref|XP_009629822.1| | 7e-45 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | 694 | 011398 (4) | ref|XP_009792971.1| | 6e-64 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] |
| JMSF031A23 | Sequence | 550 | 000596 (10) | ref|XP_009629822.1| | 2e-61 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | 727 | 000596 (10) | ref|XP_006367776.1| | 3e-103 | PREDICTED: GDSL esterase/lipase At1g28590-like [Solanum tuberosum] |
| JMSF042D07 | Sequence | 784 | 000596 (10) | ref|XP_009629822.1| | 3e-118 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis] | 624 | 011398 (4) | ref|XP_009792971.1| | 2e-52 | PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF031A23- GCCCCAATCGCTAAGAGTCCGGAATT
rJMSF015E07- AATCGCTAAGAGTCCGGAATT
____________________________________________________________
consensus GCCCCAATCGCTAAGAGTCCGGAATT
. : . : . : . : . : . :
rJMSF031A23- TTGGTTTTTGGGCGCGACAGAATACATTCGCCATTGATTTTTGGGCTTGTAAATGGGCCA
rJMSF015E07- TTGGTTTTTGGGCGCGACAGAATACATTCGCCATTGATTTTTGGGCTTGTAAATGGGCCA
____________________________________________________________
consensus TTGGTTTTTGGGCGCGACAGAATACATTCGCCATTGATTTTTGGGCTTGTAAATGGGCCA
. : . : . : . : . : . :
rJMSF031A23- ATTAGAAGCCCATCAACTATCCATTGATAAGCGGCTTCTGTCAGGTGCATCCCGTCCCAG
rJMSF015E07- ATTAGAAGCCCATCAACTATCCATTGATAAGCGGCTTCTGTCAGGTGCATCCCGTCCCAG
____________________________________________________________
consensus ATTAGAAGCCCATCAACTATCCATTGATAAGCGGCTTCTGTCAGGTGCATCCCGTCCCAG
. : . : . : . : . : . :
rJMSF031A23- CTAATATACGATGAAGGGCTATCACAAACCGTTGATAGTTGGGACCCACAATACGCATGC
rJMSF015E07- CTAATATACGATGAAGGGCTATCACAAACCGTTGATAGTTGGGACCCACAATACGCATGC
____________________________________________________________
consensus CTAATATACGATGAAGGGCTATCACAAACCGTTGATAGTTGGGACCCACAATACGCATGC
. : . : . : . : . : . :
rJMSF031A23- GGATTAGAATTGTATGGGCCCCCACCTCCACAGCAAGCTTCCAAAGTATTCTCAAATCCA
rJMSF015E07- GGATTAGAATTGTATGGGCCCCCACCTCCACAGCAAGCTTCCAAAGTATTCTCAAATCCA
____________________________________________________________
consensus GGATTAGAATTGTATGGGCCCCCACCTCCACAGCAAGCTTCCAAAGTATTCTCAAATCCA
. : . : . : . : . : . :
rJMSF031A23- TAATTGTTTGGAGATCTATACAACCGCATTGCAGCGTTATAATAGTCTGCGTAAATTATT
rJMSF015E07- TAATTGTTTGGAGATCTATACAACCGCATTGCAGCGTTATAATAGTCTGCGTAAATTATT
____________________________________________________________
consensus TAATTGTTTGGAGATCTATACAACCGCATTGCAGCGTTATAATAGTCTGCGTAAATTATT
. : . : . : . : . : . :
rJMSF031A23- CTGGTATGAGGATGAAGTTCTCTGAGATGGTTCAACTCCTTTTGAAGTAGTTCGTTGTGG
rJMSF015E07- CTGGTATGAGGATGAAGTTCTCTGAGATGGTTCAACTCCTTTTGAAGTAGTTCGTTGTGG
JMSF042D07+ GTTGTGG
____________________________________________________________
consensus CTGGTATGAGGATGAAGTTCTCTGAGATGGTTCAACTCCTTTTGAAGTAGTTCGTTGTGG
. : . : . : . : . : . :
rJMSF031A23- TACTCAGTAAAATCGTTTAACCAGTTAATGCAACCAGTCTGGGGATCATATTCGCTTGCA
rJMSF015E07- TACTCAGTAAAATCGTTTAACCAGTTAATGCAACCAGTCTGGGGATCATATTCGCTTGCA
JMSF042D07+ TATTCAGAGAAATCGTTCAACCAGTTAAGACAACCAGTTTTGGGATCATATTCACTTGTA
____________________________________________________________
consensus TACTCAGTAAAATCGTTTAACCAGTTAATGCAACCAGTCTGGGGATCATATTCGCTTGCA
. : . : . : . : . : . :
rJMSF031A23- TTGGAAGTCATGAAGTACGATAGATAGGATGGCGAACATCCAATTGGTAGGTTACCCGGA
rJMSF015E07- TTGGAAGTCATGAAGTACGATAGATAGGATGGCGAACATCCAATTGGTAGGTTACCCGGA
JMSF042D07+ TTAGCAGTCATGAAGTGCGTCAGATAAGATGCCGAACATCCAATTGGAAAGTTTCCTGGA
____________________________________________________________
consensus TTGGAAGTCATGAAGTACGATAGATAGGATGGCGAACATCCAATTGGTAGGTTACCCGGA
. : . : . : . : . : . :
rJMSF031A23- ACTATTAGTATTTGCGCTCCATATTTAATTAGTTCGTTGATAGTTGAAGCGATGACTGTA
rJMSF015E07- ACTATTAGTATTTGCGCTCCATATTTAATTAGTTCGTTGATAGTTGAAGCGATGACTGTA
JMSF042D07+ ACTATTATTGTTTGCGCCCCATGTTCAATTAGTTCGTTGACAGCTGAAGCGATGATTGCA
____________________________________________________________
consensus ACTATTAGTATTTGCGCTCCATATTTAATTAGTTCGTTGATAGTTGAAGCGATGACTGTA
. : . : . : . : . : . :
rJMSF031A23- ATAACTTTGGGAACAAAAGACATAACTTCTTCTTTGGGATGGCCTTGAAGGAATGCATAA
rJMSF015E07- ATAACTTTGGGAACAAAAGACATAACTTCTTCTTTGGGATGGCCTTGAAGGAATGCATAA
JMSF042D07+ ATAATTTTGGGAACAAAAGACACAATCTTTTCTTTAGGATAGCCTTGAAGGAATGCATAA
____________________________________________________________
consensus ATAACTTTGGGAACAAAAGACATAACTTCTTCTTTGGGATGGCCTTGAAGGAATGCATAA
. : . : . : . : . : . :
rJMSF031A23- TTGTAATCGTTGCCACCAATCTCCCCCATTAGAATTACTGAGCTTTCTAAATACTCCTTG
rJMSF015E07- TTGTAATCGTTGCCACCAATCTCCCCCATTAGAATTACTGAGCTTTCTAAATACTCCTTG
JMSF031A23+ CCATTAGAATTACTGAGCTTTCTAAATACTCCTTG
JMSF042D07+ TTGTAATCGTTGCCACCAATCTCCCCCATTAGAACTATTGAGCTTCCTAAATATTGCTTG
____________________________________________________________
consensus TTGTAATCGTTGCCACCAATCTCCCCCATTAGAATTACTGAGCTTTCTAAATACTCCTTG
. : . : . : . : . : . :
rJMSF031A23- CATCTTGACGGCGTCTGGCAAAAAGATGACAGCATCTGCTT
rJMSF015E07- CATCTTGACGGCGTCTGGCAAAAAGATGACAGCATCTGCTTAAACCAATCCAATTCA-TT
JMSF031A23+ CATCTTGACGGCGTCTGGCAAAAAGATGACAGCATCTGCTTAAACCAATCCAATTCATTC
JMSF042D07+ CATCTTGACGGCGTGTCGCAAAAAGATGACATCATCTGCTTAAACCATTCCAACTCAGTT
____________________________________________________________
consensus CATCTTGACGGCGTCTGGCAAAAAGATGACAGCATCTGCTTAAACCAATCCAATTCATTT
. : . : . : . : . : . :
rJMSF015E07- CCCAGAGATACATTTGTGCAGCTATTAATAATTCCTCTCTCCGTAAAGAA
JMSF031A23+ CCCAGAGATACATTTGTGCAGCTATTAATAATTCCTCTCTCCGTAAAGAATGACATGTCC
JMSF042D07+ CCCAGAGACGCATTTGTGCAGCGGTTAGTGATTCCTCTCTCCGTAAAGAAAGAGATATCC
JMSF026C19+ CCCAGAGACGCATTTGTGCAGCGGTTAGTGATTCCTCTCTCCGTAAAGAAAGAGATATCC
JMSF027E20+ CCCAGAGACGCATTTGTGCAGCGGTTAGTGATTCCTCTCTCCGTAAAGAAAGAGATATCC
____________________________________________________________
consensus CCCAGAGATGCATTTGTGCAGCTGTTAGTGATTCCTCTCTCCGTAAAGAAAGAGATATCC
. : . : . : . : . : . :
JMSF031A23+ ATCGCCGTCGCCCCCGCCACCGCGAAGTTCACTCCTTCCGCAAAACTCCGATCACCGTTT
JMSF042D07+ ATCGCCGTCGCCCCCGCCACCGCAAAATTCACTCCCTTCGCAAAACTCCGATCGCCGGTA
JMSF026C19+ ATTGCCGTCGCCCCCGCCACCGCAAAATTCACTCCCTTCGCAAAACTCCGATCGCCGGTA
JMSF027E20+ ATNGCCGTCGCCCCCGCCNCCGCAAAATTCACTCCCTTCGCAAAACTCCGATCGCCGGTA
JMSF019O14+ CGCAAAACTCCGATCGCCGGTA
____________________________________________________________
consensus ATCGCCGTCGCCCCCGCCACCGCAAAATTCACTCCCTTCGCAAAACTCCGATCGCCGGTA
. : . : . : . : . : . :
JMSF015E07+ GAGCGATAAAATCG
JMSF031A23+ CTTTCGCCGCCGAAATAAGGTTGCACCAGTGGAAGCCCCATGCTCTGAGCGATAAAATCG
JMSF042D07+ GTCTTGCCGCCGAAATACGGTTCCACAAATGGAAGCCCCATACTCAGAGCCATAAAATCG
JMSF026C19+ GTCTTGCCGCCGAAATACGGTTCCNCAAATGGAAGCCCCATACTCAGAGCCATAAAATCG
JMSF027E20+ GTNTTGCCGCCGAAATACGGTTCCNCAAATGGAAGCCCCATACTCAGAGCCATAAAATCG
JMSF019O14+ GTCTTGCCGCCGAAATACGGTTCCACAAATGGAAGCCCCATACTCAGAGCCATAAAATCG
____________________________________________________________
consensus GTCTTGCCGCCGAAATACGGTTCCACAAATGGAAGCCCCATACTCAGAGCCATAAAATCG
. : . : . : . : . : . :
JMSF015E07+ ATGATGAGGCGGCCGTCGGAGTAGCGGCCGGTGGGGTGGTGGAAGAACGTTTCGCCGTAG
JMSF031A23+ ATGATGAGGCGGCCGTCGGAGTAGCGGCCGGTGGGGTGGTGGAAGAACGTTTCGCCGTAG
JMSF042D07+ ATGATAAGGCGGCCGTCGGAGTAGCGGCCGGTGGGATGATGGAAGAACGTTTCGCCGTAG
JMSF026C19+ ATGATAAGGCGGCCGTNGGAGTAGCGGCCGGTGGGATGATGGAAGAACGTTTCGCCGTAG
JMSF027E20+ ATGATAAGGCGGCCGTCGGAGTAGCGGCCGGTGGGATGATGGAAGAACGTTTCGCCGTAG
JMSF019O14+ ATGATAAGGCGGCCGTCGGAGTAGCGGCCGGTGGGATGATGGAAGAACGTTTCGCCGTAG
____________________________________________________________
consensus ATGATAAGGCGGCCGTCGGAGTAGCGGCCGGTGGGATGATGGAAGAACGTTTCGCCGTAG
. : . : . : . : . : . :
JMSF015E07+ GGTGGCACCGACGACTTGACGAAGCCCTTGGATAATACTTTGGACTTGTGAATAAGGTTT
JMSF031A23+ GGTGGCACCGACGACTTGACGAAGCCCTTGGATAATACTTTGGACTTGTGAATAAGGTTT
JMSF042D07+ GGAAGCACCGCCGACATGACATAGGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
JMSF026C19+ GGAAGCNCCGCCGACATGACATAGGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
JMSF027E20+ GGAAGCNCCGCCGACATGACATAGGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
JMSF019O14+ GGAAGCNCCGCCGACATGACATAGGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
JMSF006B06+ GGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
____________________________________________________________
consensus GGAAGCACCGCCGACATGACATAGGCATTGGATGAC---TTGGACATGCGGATAAGGTTT
. : . : . : . : . : . :
JMSF015E07+ CCGGTGTCGGTGACCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCAACA
JMSF031A23+ CCGGTGTCGGTGACCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCAACA
JMSF042D07+ CCGGTGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
JMSF026C19+ CCGGNGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
JMSF027E20+ CCGGNGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
JMSF019O14+ CCGGNGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
JMSF013J04+ CA
JMSF006B06+ CCGGTGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
____________________________________________________________
consensus CCGGTGTCGGTGAGCGAATCGCCGAAACTTACGATGGCTTTGTAGCAGCCGCCGGCGACA
. : . : . : . : . : . :
JMSF015E07+ TGTCCGGTCGATTCAAACACTACCAAAACTATACAATAA
JMSF031A23+ TGTCCGGTCGATTCAAACACTACCAAAACTATACAATAA
JMSF042D07+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGC
JMSF026C19+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCTTGAGAG
JMSF027E20+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCTTGAGAG
JMSF019O14+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCTTGAGAG
JMSF013J04+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCTTGAGAG
JMSF006B06+ TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCNTGAGAG
____________________________________________________________
consensus TGTCCGGTCGATACAAACAATACCAAAAATATATAATAAGTAATTGCAGTTCCTTGAGAG
. : . : . : . : . : . :
JMSF026C19+ AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
JMSF027E20+ AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
JMSF019O14+ AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
JMSF013J04+ AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
JMSF006B06+ AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
____________________________________________________________
consensus AAAGCCNTTATGATTTATACTTTTTTTTTTTCTTTTTGTATTATTTTTCTTCCAAGTTTT
. : . : . : . : . : . :
JMSF026C19+ GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCCTCTC
JMSF027E20+ GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCCTCTC
JMSF019O14+ GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCCTCTC
JMSF013J04+ GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCTTCTC
JMSF006B06+ GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCTTCTC
____________________________________________________________
consensus GGGAGATATATAAGAAAGAGAGAGTTGCGGCTATAGAGGCATTTAATTTAACTTCCTCTC