Contig 000592:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046C23Sequence640000592 (3)gb|EYU45552.1|1e-97hypothetical protein MIMGU_mgv1a012367mg [Erythranthe guttata]503000592 (3)ref|XP_006298642.1|3e-47hypothetical protein CARUB_v10014731mg [Capsella rubella] gb|EOA31540.1| hypothe
JMSF005J11Sequence352000592 (3)ref|XP_009352249.1|9e-36PREDICTED: probable alanine--tRNA ligase, chloroplastic isoform X1 [Pyrus x bre

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF046C23- ATGAATAAGAAAATATTCTAATACATTTGACACAAATA
                      ____________________________________________________________
consensus ATGAATAAGAAAATATTCTAATACATTTGACACAAATA
 
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rJMFF046C23- AGAAAATAAGATGTTCAGAAGGGAGAATCTATCTTTAAAATAATGTATTACAAATTTACA
                      ____________________________________________________________
consensus AGAAAATAAGATGTTCAGAAGGGAGAATCTATCTTTAAAATAATGTATTACAAATTTACA
 
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rJMFF046C23- ATATTGCATACCTAATTCATAAAGCTACCACACTACTGAGCTTCCATGCCACTATGCAAT
                      ____________________________________________________________
consensus ATATTGCATACCTAATTCATAAAGCTACCACACTACTGAGCTTCCATGCCACTATGCAAT
 
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rJMFF046C23- ACAATATTACCATCTTCAGACACTGTGATTTACCGTTAGAAAGGAATGTTGTAAAATACT
                      ____________________________________________________________
consensus ACAATATTACCATCTTCAGACACTGTGATTTACCGTTAGAAAGGAATGTTGTAAAATACT
 
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rJMFF046C23- TTAGTCATTCCTTTCTTAGTCCGAATTTGAGAAACCTTCAAACTCTTGATCTCGGAGACA
                      ____________________________________________________________
consensus TTAGTCATTCCTTTCTTAGTCCGAATTTGAGAAACCTTCAAACTCTTGATCTCGGAGACA
 
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rJMFF046C23- TCTGAAACATGTGTGCCCCCACAAGGGCATCCAGGGTTTTCTCCAAACTTCACAATCCGA
JMFF046C23+ CAATCCGA
                      ____________________________________________________________
consensus TCTGAAACATGTGTGCCCCCACAAGGGCATCCAGGGTTTTCTCCAAACTTCACAATCCGA
 
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rJMFF046C23- GGAGTGCTTCCTTTGGGTATGTAATCAGGGATACTGCCACCACACAGTTGGCGGGCTTCT
JMFF046C23+ GGAGTGCTTCCTTTGGGTATGTAATCAGGGATACTGCCACCACACAGTGGGCGGGCTTCT
                      ____________________________________________________________
consensus GGAGTGCTTCCTTTGGGTATGTAATCAGGGATACTGCCACCACACAGTTGGCGGGCTTCT
 
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rJMFF046C23- TCGTATGGAAAAGTTGAAACAGAAACTTTATCCCCCTTAGAAATCAGATTATTAGCTTCT
JMFF046C23+ TCGTATGGAAAAGTTGAAACAGAAACTTTATCCCCCTTAGAAATCAGATTATTAGCTTCT
                      ____________________________________________________________
consensus TCGTATGGAAAAGTTGAAACAGAAACTTTATCCCCCTTAGAAATCAGATTATTAGCTTCT
 
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rJMFF046C23- GCTTCCAGCTCCTTTTGCTTAATTTGCAGTTCATTCTGTGAAACT
JMFF046C23+ GCTTCCAGCTCCTTTTGCTTAATTTGCAGTTCATTCTGTGAAACTGTGCCTTGATACTCC
                      ____________________________________________________________
consensus GCTTCCAGCTCCTTTTGCTTAATTTGCAGTTCATTCTGTGAAACTGTGCCTTGATACTCC
 
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JMFF046C23+ ACAAATGGCCCATCTGGGAAATGGTAGCCTTTGGTCGGCTTTAAGTGACCCCATCCAATG
                      ____________________________________________________________
consensus ACAAATGGCCCATCTGGGAAATGGTAGCCTTTGGTCGGCTTTAAGTGACCCCATCCAATG
 
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JMFF046C23+ TTTGCAATACACACATCCAGCAGATGTCCAGCCGAGTGCAGCCGAGTGTTGAGCATGCGC
                      ____________________________________________________________
consensus TTTGCAATACACACATCCAGCAGATGTCCAGCCGAGTGCAGCCGAGTGTTGAGCATGCGC
 
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JMFF046C23+ CTTTGCTCATCCACAGATAACGAAACTTCAGCACCTTTCTCAAGCTTCAAATTTGATACC
JMSF005J11+ ATCCACAGATAACGAAACTTCAGCACCTTTCTCAAGCTTCAAATTTGATACC
                      ____________________________________________________________
consensus CTTTGCTCATCCACAGATAACGAAACTTCAGCACCTTTCTCAAGCTTCAAATTTGATACC
 
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JMFF046C23+ CCATCTCCAGAATTTTCAAAAAATCCAAAGTGAAAAACAATCTGATCCTTGGATCTAACA
JMSF005J11+ CCATCTCCAGAATTTTCAAAAAATCCAAAGTGAAAAACAATCTGATCCTTGGATCTAACA
                      ____________________________________________________________
consensus CCATCTCCAGAATTTTCAAAAAATCCAAAGTGAAAAACAATCTGATCCTTGGATCTAACA
 
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JMFF046C23+ TCTTGGACAACAAATTTGAGGTTCGAACGGGAAATAAAACCAGTGTCTGCGGGTTGACCT
JMSF005J11+ TCTTGGACAACAAATTTGAGGTTCGAACGGGAAATAAAACCAGTGTCTGCGGGTTGACCT
                      ____________________________________________________________
consensus TCTTGGACAACAAATTTGAGGTTCGAACGGGAAATAAAACCAGTGTCTGCGGGTTGACCT
 
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JMFF046C23+ CCACCTTGCGGATGAAAAATTGATGAGTCCAGAATAATCACATCTCTACCATCTTCCCCC
JMSF005J11+ CCACCTTGCGGATGAAAAATTGATGAGTCCAGAATAATCACATCTCTACCATCTTCCCCC
                      ____________________________________________________________
consensus CCACCTTGCGGATGAAAAATTGATGAGTCCAGAATAATCACATCTCTACCATCTTCCCCC
 
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JMFF046C23+ CGAAAGGAAGAAAGAAGGGTAGCAGTAGTATGAAGCTTAGACATGTTGTCAAAGTATTCC
JMSF005J11+ CGAAAGGAAGAAAGAAGGGTAGCAGTAGTATGAAGCTTAGACATGTTGTCAAAGTATTCC
                      ____________________________________________________________
consensus CGAAAGGAAGAAAGAAGGGTAGCAGTAGTATGAAGCTTAGACATGTTGTCAAAGTATTCC
 
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JMFF046C23+ AGCTTTGTTGCTGGGGGCAAATTTTGTTCC
JMSF005J11+ AGCTTTGTTGCTGGGGGCAAATTTTGTTCCATGCTGCTAACTGTCTAGTTTCCTATGCTC
                      ____________________________________________________________
consensus AGCTTTGTTGCTGGGGGCAAATTTTGTTCCATGCTGCTAACTGTCTAGTTTCCTATGCTC