Contig 000591:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005A13Sequence288000591 (2)ref|XP_009775280.1|1e-40PREDICTED: TIP41-like protein [Nicotiana sylvestris]346012511 (2)ref|XP_009775280.1|2e-24PREDICTED: TIP41-like protein [Nicotiana sylvestris]
JMSF005I02Sequence341000591 (2)ref|XP_009775280.1|6e-44PREDICTED: TIP41-like protein [Nicotiana sylvestris]326012511 (2)ref|XP_009775280.1|3e-30PREDICTED: TIP41-like protein [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF005I02+                              TTTTGCAGCCGCTGGAACTTCAACAGGTGGCAGTGCTTCCT
                      ____________________________________________________________
consensus                                TTTTGCAGCCGCTGGAACTTCAACAGGTGGCAGTGCTTCCT
 
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JMSF005A13+                       CCAGTGCATCAAATGCATTAAAGTGAATTTTAGTACCAGTAGCCACAT
JMSF005I02+           GCTTCCAACCAACCAGTGCATCAAATGCATTAAAGTGAATTTTAGTACCAGTAGCCACAT
                      ____________________________________________________________
consensus             GCTTCCAACCAACCAGTGCATCAAATGCATTAAAGTGAATTTTAGTACCAGTAGCCACAT
 
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JMSF005A13+           GTTTAAGAATCAGAGCATTCTCCCCAAATATCATCTCTGGCAAGTGGGATGTTTGAAGTC
JMSF005I02+           GTTTAAGAATCAGAGCATTCTCCCCAAATATCATCTCTGGCAAGTGGGATGTTTGAAGTC
                      ____________________________________________________________
consensus             GTTTAAGAATCAGAGCATTCTCCCCAAATATCATCTCTGGCAAGTGGGATGTTTGAAGTC
 
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JMSF005A13+           TTTCTTCCCATTGTTGACGATGTGCGGAGTTGAGAATGGAGCACTTGCGAGACTCGATCT
JMSF005I02+           TTTCTTCCCATTGTTGACGATGTGCGGAGTTGAGAATGGAGCACTTGCGAGACTCGATCT
                      ____________________________________________________________
consensus             TTTCTTCCCATTGTTGACGATGTGCGGAGTTGAGAATGGAGCACTTGCGAGACTCGATCT
 
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JMSF005A13+           CCCAACCGTGAATGCGAAGTCCTCGCCGACCGCCGGAGAGTAGCTCAGCTCCGGCCGCCT
JMSF005I02+           CCCAACCGTGAATGCGAAGTCCTCGCCGACCGCCGGAGAGTAGCTCAGCTCCGGCCGCCT
                      ____________________________________________________________
consensus             CCCAACCGTGAATGCGAAGTCCTCGCCGACCGCCGGAGAGTAGCTCAGCTCCGGCCGCCT
 
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JMSF005A13+           TTAATTCTTTCTGGTCGCCCTCCCACTCCATCCTTATCAGATACGGAGTAAATAATACCA
JMSF005I02+           TTAATTCTTTCTGGTCGCCCTCCCACTCCATCCTTATCAGATACGGAGTAAATAATACCA
                      ____________________________________________________________
consensus             TTAATTCTTTCTGGTCGCCCTCCCACTCCATCCTTATCAGATACGGAGTAAATAATACCA