Contig 000590:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C22Sequence358000590 (6)ref|XP_009777968.1|1e-29PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s
JMFF046K19Sequence644000590 (6)ref|XP_009777968.1|3e-89PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s537007242 (5)ref|XP_009777969.1|1e-57PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF005H15Sequence242000590 (6)474014951ref|XP_009777969.1|6e-60PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF014P18Sequence253000590 (6)692010069 (24)sp|O80362.1|RK10_TOBAC7e-117RecName: Full=50S ribosomal protein L10, chloroplastic; AltName: Full=CL10; Fla
JMSF017O08Sequence483000590 (6)ref|XP_009777968.1|2e-53PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s613007242 (5)ref|XP_009777969.1|1e-85PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF036K07Sequence717000590 (6)ref|XP_010050093.1|2e-70PREDICTED: putative chloride channel-like protein CLC-g [Eucalyptus grandis] gb746007242 (5)ref|XP_009777969.1|2e-115PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s

Alignment

This contig is upended


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JMSF036K07+                          CCATTATAGCAGCAATGCATGCACCTGTATGAACCATGGGACCCG
                      ____________________________________________________________
consensus                            CCATTATAGCAGCAATGCATGCACCTGTATGAACCATGGGACCCG
 
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JMFF046K19+                                       AGCAGATATGCTACCAACAATCTTGACAAACA
JMSF036K07+           CCTTTCCAATATTAAGAGATGATGATACAGCAGATATGCTACCAACAATCTTGACAAACA
                      ____________________________________________________________
consensus             CCTTTCCAATATTAAGAGATGATGATACAGCAGATATGCTACCAACAATCTTGACAAACA
 
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JMFF046K19+           ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
JMSF036K07+           ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
                      ____________________________________________________________
consensus             ATGTTCTTAGAGAAAATATTACTGGGGCATCAACACCATTTAAATATGCCTTAACTTCAG
 
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JMFF046K19+           GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
JMSF036K07+           GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
                      ____________________________________________________________
consensus             GTATACCCGAGCCAGCAGCTTCTGGTGCGATAAAAGCCGTAATTAAACTTGCAAATAGTG
 
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JMFF046K19+           TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
JMSF017O08+                        GGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
JMSF036K07+           TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
                      ____________________________________________________________
consensus             TCAAACCAAAATTGGCAGATGTGAATACAAGAAAAGCTGCCAAGTACTTTCTAGCGAGCA
 
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JMFF046K19+           TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTGTCAACAGCAAGATTGTTGC
JMSF017O08+           TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
JMSF036K07+           TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
                      ____________________________________________________________
consensus             TCATGTTGGAAGTCACAACAAATTTCACGCCAGCAATGTTTTCAACAGCAAGATTGTTGC
 
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JMFF046K19+           AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMSF017O08+           AGAACCCAACAAGACTTACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMFF006C22+                            ACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
JMSF036K07+           AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCAC-
                      ____________________________________________________________
consensus             AGAACCCAACAAGACTGACAAGAAATCCAATGAGAAAACACAGGATCCATTTCATGCACA
 
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JMFF046K19+           CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMSF017O08+           CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMFF006C22+           CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
JMSF036K07+           ---ACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
                      ____________________________________________________________
consensus             CATACTGGAATATGTCAATCTTCCTTCCACTCCTCCAATCTTGCTTGAACAAGTCATTCT
 
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JMFF046K19+           CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMSF017O08+           CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMFF006C22+           CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
JMSF036K07+           CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
                      ____________________________________________________________
consensus             CTACTATCTCGTAATCGAGGCTTTCAATCGGGCAGACGTTGGAGCCGACGATGGCGACTT
 
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JMFF046K19+           GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF017O08+           GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMFF006C22+           GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF036K07+           GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
JMSF014P18+                              GGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
                      ____________________________________________________________
consensus             GGGAAGTGCAGTTGGAAGCGGATCGCCGGAGGAGGTTGTTATTGTGGTTGAGCAGGGGCT
 
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JMFF046K19+           GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF017O08+           GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMFF006C22+           GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF036K07+           GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF014P18+           GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
JMSF005H15+                                                                     AA
                      ____________________________________________________________
consensus             GAGTGACTGCCTCCATGTCTCCTTCCGCGGCCGGAGTTGGCGGTTCTGCGCCCACGACAA
 
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JMFF046K19+           CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF017O08+           CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMFF006C22+           CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF036K07+           CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF014P18+           CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
JMSF005H15+           CTGTGGGCGGCATGGGAGAGCNTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
                      ____________________________________________________________
consensus             CTGTGGGCGGCATGGGAGAGCGTGAAGGTGAAGTAAGGAAATGGCAGTTACTGTGAATCC
 
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JMFF046K19+           TCGCCGGTCGCC                                                
JMSF017O08+           TCGCCGGTCGCC                                                
JMFF006C22+           TCGCCGGTCGCC                                                
JMSF036K07+           TCGCCGGTCGCCGA                                              
JMSF014P18+           TCGCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
JMSF005H15+           TCNCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
                      ____________________________________________________________
consensus             TCGCCGGTCGCCGACAAGGATTGGGATACAGGAGAAAGTATAAATATGGTCCCAACTACC
 
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JMSF014P18+           CAAAGTGAGTAAAAATTTCTTCAAAATATACC                            
JMSF005H15+           CAAAGTGAGTAAAAATTTCTTCAAAATATACGAAAGCGATTTCAATTTGTTTATTTATAA
                      ____________________________________________________________
consensus             CAAAGTGAGTAAAAATTTCTTCAAAATATACGAAAGCGATTTCAATTTGTTTATTTATAA
 
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JMSF005H15+           CAAGGAGAAATCGTCNGTCTATGTNTAAACCTGAAATCGTCCGTCCATGTCTAAACCTTC
                      ____________________________________________________________
consensus             CAAGGAGAAATCGTCNGTCTATGTNTAAACCTGAAATCGTCCGTCCATGTCTAAACCTTC