clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS013G07 | Sequence | 574 | 000585 (8) | ref|XP_009783535.1| | 2e-42 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | |||||
JMFS165E12 | Sequence | 606 | 000585 (8) | ref|XP_009783535.1| | 7e-42 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | |||||
JMFS168H08 | Sequence | 579 | 000585 (8) | ref|XP_009783535.1| | 6e-42 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | |||||
JMSF001B03 | Sequence | 273 | 000585 (8) | ref|XP_009783535.1| | 1e-20 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | 803 | 012725 (3) | ref|XP_002281489.1| | 2e-81 | PREDICTED: TBC1 domain family member 8B [Vitis vinifera] emb|CBI25326.3| unnamed |
JMSF004N17 | Sequence | 281 | 000585 (8) | ref|XP_009604107.1| | 4e-13 | PREDICTED: ecotropic viral integration site 5 ortholog-like [Nicotiana tomentos | |||||
JMSF005O04 | Sequence | 281 | 000585 (8) | ref|XP_009604107.1| | 4e-13 | PREDICTED: ecotropic viral integration site 5 ortholog-like [Nicotiana tomentos | 353 | 012725 (3) | |||
JMSF040F16 | Sequence | 600 | 000585 (8) | ref|XP_009783535.1| | 2e-57 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | |||||
JMSF041O12 | Sequence | 646 | 000585 (8) | ref|XP_009783535.1| | 2e-47 | PREDICTED: TBC1 domain family member 2B-like [Nicotiana sylvestris] | 711 | 012725 (3) | ref|XP_002281489.1| | 6e-39 | PREDICTED: TBC1 domain family member 8B [Vitis vinifera] emb|CBI25326.3| unnamed |
This contig is upended
. : . : . : . : . : . :
JMSF040F16+ TG
____________________________________________________________
consensus TG
. : . : . : . : . : . :
JMSF040F16+ ATCTGTCCAAAGATTCTGACCTATCCATATCATAGAACTCATCCTCTGAGTCCTCTTCAA
JMSF041O12+ CTTCAA
____________________________________________________________
consensus ATCTGTCCAAAGATTCTGACCTATCCATATCATAGAACTCATCCTCTGAGTCCTCTTCAA
. : . : . : . : . : . :
JMSF040F16+ GAGCTCCTTTCGTGGGTTTAGCCTCTTCTATGGTAGAAGAATGCTCCACCATTCCAGAGT
JMFS168H08+ CATTCCAGAGT
JMFS013G07+ GAATGCTCCACCATTCCAGAGT
JMSF041O12+ GAGCTCCTTTCGTGGGTTTAGCCTCTTCTATGGTAGAAGAATGCTCCACCATTCCAGAGT
JMFS165E12+ TTCCAGAGT
____________________________________________________________
consensus GAGCTCCTTTCGTGGGTTTAGCCTCTTCTATGGTAGAAGAATGCTCCACCATTCCAGAGT
. : . : . : . : . : . :
JMSF040F16+ CTTGCTCACTTTNGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
JMFS168H08+ CTTGCTCACTTTTGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
JMFS013G07+ CTTGCTCACTTTTGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
JMSF041O12+ CTTGCTCACTTTTGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
JMFS165E12+ CTTGCTCACTTTTGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
____________________________________________________________
consensus CTTGCTCACTTTTGACTTTATTTACCCTTTTAACACGCACGCTCATCATATCCTCAATGG
. : . : . : . : . : . :
JMSF040F16+ CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTTAGTTG
JMFS168H08+ CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTCAGTTG
JMFS013G07+ CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTCAGTTG
JMSF041O12+ CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTCAGTTG
JMFS165E12+ CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTCAGTTG
____________________________________________________________
consensus CTCTAAGTGATGATCTAACTTCAGACCATACTTGGATCTGGTGGGTTTTTTTCTCAGTTG
. : . : . : . : . : . :
JMSF040F16+ ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
JMFS168H08+ ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
JMFS013G07+ ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
JMSF041O12+ ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
JMFS165E12+ ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
____________________________________________________________
consensus ATGTTGGTATCTCTTTTATCTCCATTTGATTTTCAATACCATTCTGAGAATGAGAATCTG
. : . : . : . : . : . :
JMSF040F16+ GTTCCTTCNTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAN
JMFS168H08+ GTTCCTTCTTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAT
JMFS013G07+ GTTCCTTCTTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAT
JMSF041O12+ GTTCCTTCTTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAT
JMFS165E12+ GTTCCTTCTTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAT
____________________________________________________________
consensus GTTCCTTCTTGATTGGCTCATCAGACAGCTCTTCACAAGTGTTGCCTGAAGATGTTCCAT
. : . : . : . : . : . :
JMSF040F16+ TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
JMFS168H08+ TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
JMFS013G07+ TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
JMSF041O12+ TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
JMSF001B03+ GCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
JMFS165E12+ TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
____________________________________________________________
consensus TTATGGGCAACTGAGCAAAATCCGATTGCCGTTCCAGAAAGTCTGTCCACCTGTCAGATC
. : . : . : . : . : . :
JMSF040F16+ TCCCCTCCTCTTNTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMFS168H08+ TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMFS013G07+ TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMSF041O12+ TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMSF001B03+ TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMFS165E12+ TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMSF005O04+ GTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
JMSF004N17+ GTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
____________________________________________________________
consensus TCTCCTCCTCTTCTTCCTTGTAGATATTAGCATATTCACGATATCTTTGTACATGCTGGG
. : . : . : . : . : . :
JMSF040F16+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMFS168H08+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMFS013G07+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMSF041O12+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMSF001B03+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMFS165E12+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMSF005O04+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
JMSF004N17+ GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
____________________________________________________________
consensus GCCTCACTGCAAACCCATAAGCATCCCTCTTGTGATCGGCAGAGATGCGCGGAGGATTAA
. : . : . : . : . : . :
JMSF040F16+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGG
JMFS168H08+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMFS013G07+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMSF041O12+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMSF001B03+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMFS165E12+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMSF005O04+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
JMSF004N17+ GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
____________________________________________________________
consensus GCACCGCCACCGCCGTTCCTGCTGATACTGAATTCGCTTTCGCCTTCATTATCGGGCAAC
. : . : . : . : . : . :
JMFS168H08+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
JMFS013G07+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
JMSF041O12+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
JMSF001B03+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGC
JMFS165E12+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
JMSF005O04+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
JMSF004N17+ AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
____________________________________________________________
consensus AAATTCGCGGACTATTCCCAGATTTTAATGGAATTCCCCTCCCCCCCTAGATTTTCTGCA
. : . : . : . : . : . :
JMFS168H08+ ACTAAAATGAAGAAAAAATTGGGAATTT
JMFS013G07+ ACTAAAATGAAG
JMSF041O12+ ACTAAAATGAAGAAAAAATTGGGAATTTTCAAAATG
JMFS165E12+ ACTAAAATGAAGAAAAAATTGGGAATTTTCAAAATGGGCGAACGATTTTGGACTCAA
JMSF005O04+ ACTAAAATGAAGAAAAAATTGGGAATTTTCAAAATGGGCGAACGATTTTGGACTCAA
JMSF004N17+ ACTAAAATGAAGAAAAAATTGGGAATTTTCAAAATGGGCGAACGATTTTGGACTCAAACC
____________________________________________________________
consensus ACTAAAATGAAGAAAAAATTGGGAATTTTCAAAATGGGCGAACGATTTTGGACTCAAACC