| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002H18 | Sequence | 425 | 000582 (6) | ref|XP_009609785.1| | 2e-47 | PREDICTED: axial regulator YABBY 1 [Nicotiana tomentosiformis] | 669 | 006667 (25) | gb|ABA81885.1| | 2e-75 | profilin-like [Solanum tuberosum] |
| JMSF004K10 | Sequence | 456 | 000582 (6) | ref|XP_009609785.1| | 6e-50 | PREDICTED: axial regulator YABBY 1 [Nicotiana tomentosiformis] | |||||
| JMSF025O17 | Sequence | 626 | 000582 (6) | ref|XP_009609785.1| | 7e-97 | PREDICTED: axial regulator YABBY 1 [Nicotiana tomentosiformis] | 752 | 000582 (6) | emb|CDP19940.1| | 3e-125 | unnamed protein product [Coffea canephora] |
| JMSF045J16 | Sequence | 707 | 000582 (6) | ref|XP_009609785.1| | 8e-120 | PREDICTED: axial regulator YABBY 1 [Nicotiana tomentosiformis] | 738 | 000582 (6) | emb|CDP19940.1| | 4e-129 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF025O17- GATGTTGANAGACAAGATAATTAAAAGGAACACTTAGAGTACGTACGT
____________________________________________________________
consensus GATGTTGANAGACAAGATAATTAAAAGGAACACTTAGAGTACGTACGT
. : . : . : . : . : . :
rJMSF025O17- ACGTTGGGAGACTAATTAATAAACATAGAAGAGGAAAGAAACATAG-GATTACATTACAC
rJMSF045J16- CGTTGGGAGACTAATTAATAAACATAGAAGAGGAAAGAAACATAGCGATTACATTACAC
____________________________________________________________
consensus ACGTTGGGAGACTAATTAATAAACATAGAAGAGGAAAGAAACATAGCGATTACATTACAC
. : . : . : . : . : . :
rJMSF025O17- CATAACATAAGATGATGATGACTAGCTAGCTTGATCGATCATTAATTATTCTTAGATGAT
rJMSF045J16- CATAACATAAGATGATGATGACTAGCTAGCTTGATCGATCATTAATTATTCTTAGATGAT
____________________________________________________________
consensus CATAACATAAGATGATGATGACTAGCTAGCTTGATCGATCATTAATTATTCTTAGATGAT
. : . : . : . : . : . :
rJMSF025O17- AATTATTAATAGGGAGATACACCCAAATTTGGTGGTGCCAGAAACCCATCTTTCATCAGA
rJMSF045J16- AATTATTAATAGGGAGATACACCCAAATTTGGTGGTGCCAGAAACCCATCTTTCATCAGA
____________________________________________________________
consensus AATTATTAATAGGGAGATACACCCAAATTTGGTGGTGCCAGAAACCCATCTTTCATCAGA
. : . : . : . : . : . :
rJMSF025O17- CCATCCTCTCCTTCCTGTTGGCATGCATTGGGTTTCTTCACGGGTTGATCAGGCATAAGT
rJMSF045J16- CCATCCTCTCCTTCCTGTTGGCATGCATTGGGTTTCTTCACGGGTTGATCAGGCATAAGT
JMSF045J16+ TCCTGTTGGCATGCATTGGGTTTCTTCACGGGTTGATCAGGCATAAGT
____________________________________________________________
consensus CCATCCTCTCCTTCCTGTTGGCATGCATTGGGTTTCTTCACGGGTTGATCAGGCATAAGT
. : . : . : . : . : . :
rJMSF025O17- CCGAAATGAATGTGAGGGAAGTGGGCCCAATTCTTTGCAGCTGCACTGAAGGCCTCTCTG
rJMSF045J16- CCGAAATGAATGTGAGGGAAGTGGGCCCAATTCTTTGCAGCTGCACTGAAGGCCTCTCTG
JMSF025O17+ TTTGCAGCTGCACTGAAGGCCTCTCTG
JMSF045J16+ CCGAAATGAATGTGAGGGAAGTGGGCCCAATTCTTTGCAGCTGCACTGAAGGCCTCTCTG
____________________________________________________________
consensus CCGAAATGAATGTGAGGGAAGTGGGCCCAATTCTTTGCAGCTGCACTGAAGGCCTCTCTG
. : . : . : . : . : . :
rJMSF025O17- TGGCTTATATCAGGGTTTCCAGCTTTGATACGCTGGATCTCATCCTTGATGAAGCGGTTG
rJMSF045J16- TGGCTTATATCAGGGTTTCCAGCTTTGATACGCTGGATCTCATCCTTGATGAAGCGGTTG
JMSF025O17+ TNGCTTATATCAGGGTTTCCAGCTTTGATACGCTGGATCTCATCCTTGATGAAGCGGTTG
JMSF045J16+ TGGCTTATATCAGGGTTTCCAGCTTTGATACGCTGGATCTCATCCTTGATGAAGCGGTTG
____________________________________________________________
consensus TGGCTTATATCAGGGTTTCCAGCTTTGATACGCTGGATCTCATCCTTGATGAAGCGGTTG
. : . : . : . : . : . :
rJMSF025O17- TAAGCAGATGGCACTCTCTGTCTCTTCTCCGGGGGTCTATTAGCGACAGGAGGCTTAGGA
rJMSF045J16- TAAGCAGATGGCACTCTCTGTCTCTTCTCCGGGGGTCTATTAGCGACAGGAGGCTTAGGA
JMSF025O17+ TAAGCAGATGGCACTCTCTGTCTCTTCTCCGGGGGTCTATTAGCGACAGGAGGCTTAGGA
JMSF045J16+ TAAGCAGATGGCACTCTCTGTCTCTTCTCCGGGGGTCTATTAGCGACAGGAGGCTTAGGA
____________________________________________________________
consensus TAAGCAGATGGCACTCTCTGTCTCTTCTCCGGGGGTCTATTAGCGACAGGAGGCTTAGGA
. : . : . : . : . : . :
rJMSF025O17- AGCTCATCAACTCCTCGGATTGGCATGAGAGACTCGTTGGGGTTTGGCTGATTCATCAAC
rJMSF045J16- AGCTCATCAACTCCTCGGATTGGCATGAGAGACTCGTTGGGGTTTGGCTGATTCATCAAC
JMSF025O17+ AGCTCATCAACTCCTCGGATTGGCATGAGAGACTCGTTGGGGTTTGGCTGATTCATCAAC
JMSF045J16+ AGCTCATCAACTCCTCGGATTGGCATGAGAGACTCGTTGGGGTTTGGCTGATTCATCAAC
JMSF002H18+ ATCAAC
JMSF004K10+ ATGAGAGACTCGNTGGGGTTTGGCTGATTCATCAAC
____________________________________________________________
consensus AGCTCATCAACTCCTCGGATTGGCATGAGAGACTCGTTGGGGTTTGGCTGATTCATCAAC
. : . : . : . : . : . :
rJMSF025O17- AGACTTGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
rJMSF045J16- AGACTTGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
JMSF025O17+ AGACTTGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
JMSF045J16+ AGACTTGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
JMSF002H18+ AGACTNGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
JMSF004K10+ AGACTAGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTNGAGGGGAGAAGAAAGAATGG
____________________________________________________________
consensus AGACTTGGCGGAGTGTTGCGAATTTCATCCAGGAGATTTTGAGGGGAGAAGAAAGAATGG
. : . : . : . : . : . :
rJMSF025O17- GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
rJMSF045J16- GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
JMSF025O17+ GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
JMSF045J16+ GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
JMSF002H18+ GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
JMSF004K10+ NGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
____________________________________________________________
consensus GGAAGGTGAAGCTGGTTGGGGGCGGTGGGGAGGAGGAGGCCGCGCATGTTGACGGAGAGA
. : . : . : . : . : . :
rJMSF025O17- AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGCANGGAACA
rJMSF045J16- AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGTAAGGAACA
JMSF025O17+ AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGCAAGGAACA
JMSF045J16+ AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGTAAGGAACA
JMSF002H18+ AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGCAAGGAACA
JMSF004K10+ AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCNGGAGCAAGGAACA
____________________________________________________________
consensus AGGTTGGTGCAATGGCCGCATCGAACCGTCACAGTCTTGAATAAGCTGGAGCAAGGAACA
. : . : . : . : . : . :
rJMSF025O17- CTCACCGCGAGGACAGTGTCNCAAAAGTTGCAATGGACGTAACA
rJMSF045J16- CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
JMSF025O17+ CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
JMSF045J16+ CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
JMSF002H18+ CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
JMSF004K10+ CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
____________________________________________________________
consensus CTCACCGCGAGGACAGTGTCACAAAAGTTGCAATGGACGTAACAGAGCTGCTCGCCAGAG
. : . : . : . : . : . :
rJMSF045J16- GGGGAGAGGTGGTGGGGGT
JMSF025O17+ GGGGAGAGGTGGTGGGGGTGGTGGTGATGGTGGTCCGGAGCGAAAGCAGTAGATGAAGAA
JMSF045J16+ GGGGAGAGGTGGTGGGGGTGGTGGTGATGGTGGTCCGGAGCGAAAGCAGTAGATGAAGAA
JMSF002H18+ GGGGAGAGGTGGTGGGGGTGGTGGTGATGGTGGTCCGGAGCGAAAGCAGTAGATGAAGAA
JMSF004K10+ GGGGAGAGGTGGTGGGGGTGGTGGTGATGGTGGTCCGGAGCGAAAGCAGTAGATGAAGAA
____________________________________________________________
consensus GGGGAGAGGTGGTGGGGGTGGTGGTGATGGTGGTCCGGAGCGAAAGCAGTAGATGAAGAA
. : . : . : . : . : . :
JMSF025O17+ GACATGTTTTTTGGTTGGAGATGATAATATGGATGCCCAAAGCTGGGTAGCTAGCTTGAT
JMSF045J16+ GACATGTTTTTTGGTTGGAGATGATAATATGGATGCCCAAAGCTGGGTAGCTAGCTTGAT
JMSF002H18+ GACATGTTTTTTGGTTGGAGATGATAATATGGATGCCCAAAGCTGGGTAGCTAGCTTGAT
JMSF004K10+ GACATGTTTTTTGGTTGGAGATGATAATATGGATGCCCAAAGCTGGGTAGCTAGCTTGAT
____________________________________________________________
consensus GACATGTTTTTTGGTTGGAGATGATAATATGGATGCCCAAAGCTGGGTAGCTAGCTTGAT
. : . : . : . : . : . :
JMSF025O17+ TGTTTTCTTGATTTGATTTGATTTGATTGATTGATAGAGTGACTGATCGAGGGACGA
JMSF045J16+ TGTTTTCTTGATTTGATTTGATTTGATTGATTGATAGAGTGACTGATCGAGGGACGA
JMSF002H18+ TGTTTTCTTGATTTGATTTGATTTGATTGATTGATAGAGTGACTGATCGAGGGACGA
JMSF004K10+ TGTTTTCTTGATTTGATTTGATTTGATTGATTGATAGAGTGACTGATCGAGGGACGACCC
____________________________________________________________
consensus TGTTTTCTTGATTTGATTTGATTTGATTGATTGATAGAGTGACTGATCGAGGGACGACCC