Contig 000577:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004G04Sequence341000577 (2)ref|XP_009623679.1|3e-34PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Nicotiana tomento
JMSF006F03Sequence389000577 (2)ref|XP_009774999.1|2e-37PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Nicotiana sylvest129011317 (2)ref|XP_011080035.1|1e-04PREDICTED: geranylgeranyl transferase type-2 subunit alpha [Sesamum indicum] re

Alignment

This contig is upended


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JMSF006F03+                                          AAGAAAAAAGCAAGGAATTGCACAACAAG
                      ____________________________________________________________
consensus                                            AAGAAAAAAGCAAGGAATTGCACAACAAG
 
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JMSF006F03+           GTGTACTAATTTTTCTGAAGTTCTTCGTTCCAGGTAATGTCTTGTAAGCCATCATAGCTT
JMSF004G04+                              GTTCTTCGTTCCAGGTAATGTCTTGTAAGCCATCATAGCTT
                      ____________________________________________________________
consensus             GTGTACTAATTTTTCTGAAGTTCTTCGTTCCAGGTAATGTCTTGTAAGCCATCATAGCTT
 
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JMSF006F03+           CACCATTTAAAATTACAAGGCTAATAACCATTAAAACAGGATGAACGTTGAAAATGAGAT
JMSF004G04+           CACCATTTAAAATTACAAGGCTAATAACCATTAAAACAGGATGAACGTTGAAAATGAGAT
                      ____________________________________________________________
consensus             CACCATTTAAAATTACAAGGCTAATAACCATTAAAACAGGATGAACGTTGAAAATGAGAT
 
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JMSF006F03+           CTTTGTTATCGGAGATGAGGGCCAATCCTCCCCTGTAACGCACCGTCCACGTTACAACCA
JMSF004G04+           CTTTGTTATCGGAGATGAGGGCCAATCCTCCCCTGTAACGCACCGTCCACGTTACAACCA
                      ____________________________________________________________
consensus             CTTTGTTATCGGAGATGAGGGCCAATCCTCCCCTGTAACGCACCGTCCACGTTACAACCA
 
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JMSF006F03+           GCGTCGCCACAACGATTCCTATAATCCTCACCAGCAAGAAGATCGGAAACTTCACCGTCG
JMSF004G04+           GCGTCGCCACAACGATTCCTATAATCCTCACCAGCAAGAAGATCGGAAACTTCACCGTCG
                      ____________________________________________________________
consensus             GCGTCGCCACAACGATTCCTATAATCCTCACCAGCAAGAAGATCGGAAACTTCACCGTCG
 
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JMSF006F03+           GCACTGCCATTGTCGACTGAGCTCTTCAATGACGAATTCACGACTTCTTCACTAAACTCT
JMSF004G04+           GCACTGCCATTGTCGACTGAGCTCTTCAATGACGAATTCACGACTTCTTCACTAAACTCT
                      ____________________________________________________________
consensus             GCACTGCCATTGTCGACTGAGCTCTTCAATGACGAATTCACGACTTCTTCACTAAACTCT
 
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JMSF006F03+           TCCAGAAATGAGTCTATTAGGGTTTGGCAATTCCCGGAGGCAGGTTGGTACTTGGTAC  
JMSF004G04+           TCCAGAAATGAGTCTATTAGGGTTTGGCAATTCCCGGAGGCAGGTTGGTACTTGGTACTC
                      ____________________________________________________________
consensus             TCCAGAAATGAGTCTATTAGGGTTTGGCAATTCCCGGAGGCAGGTTGGTACTTGGTACTC