Contig 000568:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003K02Sequence386000568 (2)ref|XP_009785506.1|127PREDICTED: uncharacterized protein LOC104233762 [Nicotiana sylvestris]
JMSF031F07Sequence664000568 (2)ref|XP_009785506.1|327PREDICTED: uncharacterized protein LOC104233762 [Nicotiana sylvestris]168020432gb|KCW79527.1|1e-09hypothetical protein EUGRSUZ_C00903 [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF031F07+                  GGCATCAAAAGTGTTATCTTCAAACGGGAGCTTAGGATCGACATTCAAATCTT
                      ____________________________________________________________
consensus                    GGCATCAAAAGTGTTATCTTCAAACGGGAGCTTAGGATCGACATTCAAATCTT
 
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JMSF031F07+           GCACAACATATTCCGTTAGTACTGGATTTCGCTTTAGCTCGTCTCCATTCATGCCCATTC
                      ____________________________________________________________
consensus             GCACAACATATTCCGTTAGTACTGGATTTCGCTTTAGCTCGTCTCCATTCATGCCCATTC
 
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JMSF031F07+           CAACGATTTTTTCTTGCTTATACCCTGCAGGGTAGTGACTGACCCAACTGCTACACATAT
                      ____________________________________________________________
consensus             CAACGATTTTTTCTTGCTTATACCCTGCAGGGTAGTGACTGACCCAACTGCTACACATAT
 
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JMSF031F07+           CAAGGATTGCTACTCCTGGGGTATTAGCAGGAGGCAAAGCCTCTGAGTAATATCTAGTAA
                      ____________________________________________________________
consensus             CAAGGATTGCTACTCCTGGGGTATTAGCAGGAGGCAAAGCCTCTGAGTAATATCTAGTAA
 
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JMSF031F07+           GTGCAGCAATGGCAGGATCATCAATGTGTGTCACAAAACGTGGCGCTTCATAGAATAACG
                      ____________________________________________________________
consensus             GTGCAGCAATGGCAGGATCATCAATGTGTGTCACAAAACGTGGCGCTTCATAGAATAACG
 
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JMSF031F07+           AATCCGATGACTCATCAAATCGCTGGAAATCCTCTTCCTTGAAAGGGAATTGCTCAGGCC
JMSF003K02+                                             TTCCTTGAAAGGGAATTGCTCAGGCC
                      ____________________________________________________________
consensus             AATCCGATGACTCATCAAATCGCTGGAAATCCTCTTCCTTGAAAGGGAATTGCTCAGGCC
 
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JMSF031F07+           AATCCACATTCTTCAGCACCTGCTCAATTGCGCCTTTCTGTCGAGCATAAGCCATGAAAG
JMSF003K02+           AATCCACATTCTTCAGCACCTGCTCAATTGCGCCTTTCTGTCGAGCATAAGCCATGAAAG
                      ____________________________________________________________
consensus             AATCCACATTCTTCAGCACCTGCTCAATTGCGCCTTTCTGTCGAGCATAAGCCATGAAAG
 
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JMSF031F07+           ATTTCCCTCCGAGATTTGCAGCCATGAACTGAGACCAAAACGACAACCCGGTTCCTAAAA
JMSF003K02+           ATTTCCCTCCGAGATTTGCAGCCATGAACTGAGACCAAAACGACAACCCGGTTCCTAAAA
                      ____________________________________________________________
consensus             ATTTCCCTCCGAGATTTGCAGCCATGAACTGAGACCAAAACGACAACCCGGTTCCTAAAA
 
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JMSF031F07+           CCACCCTGCGAGTAGTGTTGTACCCAAAGACTCTTCTTTTCCCGACAACTACTCCTGATG
JMSF003K02+           CCACCCTGCGAGTAGTGTTGTACCCAAAGACTCTTCTTTTCCCGACAACTACTCCTGATG
                      ____________________________________________________________
consensus             CCACCCTGCGAGTAGTGTTGTACCCAAAGACTCTTCTTTTCCCGACAACTACTCCTGATG
 
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JMSF031F07+           GTCGAAGAACATGATTCTCAGAAGCGAAATTAACTGAAATGGCAGTTGTCGCAGGTAAAG
JMSF003K02+           GTCGAAGAACATGATTCTCAGAAGCGAAATTAACTGAAATGGCAGTTGTCGCAGGTAAAG
                      ____________________________________________________________
consensus             GTCGAAGAACATGATTCTCAGAAGCGAAATTAACTGAAATGGCAGTTGTCGCAGGTAAAG
 
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JMSF031F07+           AAGGGTAAACGCCGCCCAAATTGGGTATCTTGCTTTGTAATCTGAGACCAAATCGGTTGG
JMSF003K02+           AAGGGTAAACGCCGCCCAAATTGGGTATCTTGCTTTGTAATCTGAGACCAAATCGGTTGG
                      ____________________________________________________________
consensus             AAGGGTAAACGCCGCCCAAATTGGGTATCTTGCTTTGTAATCTGAGACCAAATCGGTTGG
 
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JMSF031F07+           CCATTTTCTT                                                  
JMSF003K02+           CCATTTTCTTGGTTTTTGAAAATATATTCGTATGGATTTTATGCCAACATTTCTTGTGTC
                      ____________________________________________________________
consensus             CCATTTTCTTGGTTTTTGAAAATATATTCGTATGGATTTTATGCCAACATTTCTTGTGTC