clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007C09 | Sequence | 533 | 000566 (9) | ref|XP_006347560.1| | 9e-72 | PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum | 759 | 008143 (3) | ref|XP_004235289.1| | 2e-69 | PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum] |
JMFS035H10 | Sequence | 571 | 000566 (9) | ref|XP_010322496.1| | 8e-10 | PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum] | |||||
JMFS045F10 | Sequence | 627 | 000566 (9) | ref|XP_010322496.1| | 4e-32 | PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum] | |||||
JMFS045H06 | Sequence | 564 | 000566 (9) | ref|XP_010322496.1| | 3e-07 | PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum] | |||||
JMFS074G03 | Sequence | 638 | 000566 (9) | ref|XP_010322496.1| | 1e-15 | PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum] | |||||
JMFS131H04 | Sequence | 626 | 000566 (9) | ref|XP_010322496.1| | 2e-14 | PREDICTED: uncharacterized protein At1g51745-like [Solanum lycopersicum] | |||||
JMSF003I12 | Sequence | 364 | 000566 (9) | 687 | 002755 (4) | ref|XP_009783633.1| | 3e-33 | PREDICTED: uncharacterized protein At1g51745-like [Nicotiana sylvestris] | |||
JMSF009O15 | Sequence | 231 | 000566 (9) | 740 | 002755 (4) | ref|XP_006347560.1| | 8e-36 | PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum | |||
JMSF018C02 | Sequence | 441 | 000566 (9) | 726 | 002755 (4) | ref|XP_006347560.1| | 8e-85 | PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum |
This contig is upended
. : . : . : . : . : . :
JMFF007C09+ GCTGGAGACCAGAACTCTCAGAAG
____________________________________________________________
consensus GCTGGAGACCAGAACTCTCAGAAG
. : . : . : . : . : . :
JMFF007C09+ CTTTATGAGATTTCAGGGATAACTGTTCTTGATTTTGATATTCGAAGCATTCTGGGGATG
____________________________________________________________
consensus CTTTATGAGATTTCAGGGATAACTGTTCTTGATTTTGATATTCGAAGCATTCTGGGGATG
. : . : . : . : . : . :
JMFF007C09+ TCACTACATCTCTTCTTACATTGTCATCTGGTGATTTATTTATTTTATCATTACATGAAT
____________________________________________________________
consensus TCACTACATCTCTTCTTACATTGTCATCTGGTGATTTATTTATTTTATCATTACATGAAT
. : . : . : . : . : . :
JMFF007C09+ AACTTGTTTTCCCATTTTTGGCCCCTGCTAGTTGCCTCTCAAGTTCAAGAGCATGAATTA
____________________________________________________________
consensus AACTTGTTTTCCCATTTTTGGCCCCTGCTAGTTGCCTCTCAAGTTCAAGAGCATGAATTA
. : . : . : . : . : . :
JMFF007C09+ TTGCATCTTCACGACGTGCGTATTTCTCTCTTTTCTTTGGAGGCATGCCTAGAGAAGCCT
____________________________________________________________
consensus TTGCATCTTCACGACGTGCGTATTTCTCTCTTTTCTTTGGAGGCATGCCTAGAGAAGCCT
. : . : . : . : . : . :
JMFF007C09+ CAGCTCGTTCAATACAGTCATCAAACTCACCACATCTGAAAGCCTTCACACGCTTTGACT
____________________________________________________________
consensus CAGCTCGTTCAATACAGTCATCAAACTCACCACATCTGAAAGCCTTCACACGCTTTGACT
. : . : . : . : . : . :
JMFF007C09+ TCTCCAAATTGTACCAATCCACACTAGCATCATCCCTTCCGAGAAGCTTCACTGCAGTTC
JMFS045F10+ CACACTGGCATCTTCCCTCCCAAGAAGCTTGACTGGAGTTC
____________________________________________________________
consensus TCTCCAAATTGTACCAATCCACACTGGCATCTTCCCTTCCGAGAAGCTTGACTGGAGTTC
. : . : . : . : . : . :
JMFF007C09+ CAGATCGTGGTGTCATCACATGTGAAGTTGAAAGCTCATCTGGACCGAGAATTTTACCTG
JMFS045F10+ CTGATCGCGGAGACATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
JMFS035H10+ TCATCAGGCCCCAGAATTTTACCCG
JMFS045H06+ CG
JMFS131H04+ ATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
JMFS074G03+ CATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
____________________________________________________________
consensus CTGATCGTGGTGTCATCACATGAGAAGCAGAAAGCTCATCAGGCCCCAGAATTTTACCCG
. : . : . : . : . : . :
JMFF007C09+ GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATGCACCCAGCACCACAATCAAGTA
JMFS045F10+ GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS035H10+ GCCACCATGACCCATTCGGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS045H06+ GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS131H04+ GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
JMFS074G03+ GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
____________________________________________________________
consensus GCCACCATGACCCATTTCGCCTCCGGACCCAAACAATACTCCCAACTCCACAATCAACCA
. : . : . : . : . : . :
JMFF007C09+ TTCCTTCTTCTGTTTCCGAGCT
JMFS045F10+ TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS035H10+ TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS045H06+ TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCTCTCTCC
JMFS131H04+ TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
JMFS074G03+ TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
____________________________________________________________
consensus TTCCTTGTTCCGTTTCCGAGCTTCCCATCTCTTCCCACCACACTCACACACGCACTCTCC
. : . : . : . : . : . :
JMFS045F10+ CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS035H10+ CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS045H06+ CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS131H04+ CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMFS074G03+ CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
JMSF018C02+ GTATATACTATATACTTATAT
____________________________________________________________
consensus CTCTATTAAAAAAAAATTACAATCCAGAAGTATATGTCTGTATATACTATATACTTATAT
. : . : . : . : . : . :
JMFS045F10+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS035H10+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS045H06+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS131H04+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMFS074G03+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMSF018C02+ ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
JMSF003I12+ CCGA
____________________________________________________________
consensus ATACTGCTAAAATACAGGTATCACTATCACTTTACTATCTTCAGTAAATATTTTCCCCGA
. : . : . : . : . : . :
JMFS045F10+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS035H10+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS045H06+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS131H04+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMFS074G03+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMSF018C02+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
JMSF003I12+ AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
____________________________________________________________
consensus AACTTATATAACGCAATTGAAAAATAATATACGCGGAAAAGGGGAAAAAATATGTAAAGA
. : . : . : . : . : . :
JMFS045F10+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS035H10+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS045H06+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS131H04+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMFS074G03+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMSF018C02+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
JMSF003I12+ GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
____________________________________________________________
consensus GAGCTCACAAATACAAACACTGTAGATGATCAAAGGAAAGATGATTTAGGGCATTTGATT
. : . : . : . : . : . :
JMFS045F10+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS035H10+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS045H06+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS131H04+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMFS074G03+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF018C02+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF009O15+ CCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
JMSF003I12+ GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
____________________________________________________________
consensus GATCAGCCTCCGGAAAAGAAGAGAGTGAAATGGATTTGCAGAAAGGCAGGTTTGGAAGAT
. : . : . : . : . : . :
JMFS045F10+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACAAA
JMFS035H10+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS045H06+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS131H04+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMFS074G03+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF018C02+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF009O15+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
JMSF003I12+ CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
____________________________________________________________
consensus CGGAGTGTACAGATTGGGGCTAGGGTTAGGGTTTCCATTCAGAATTGGGGGAAATACATA
. : . : . : . : . : . :
JMFS045F10+ TCTAGGGATTTTGGTGAGAAATTACA
JMFS035H10+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS045H06+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS131H04+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMFS074G03+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF018C02+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF009O15+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
JMSF003I12+ TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
____________________________________________________________
consensus TCTAGGGATTTTGGTGAGAAATTACAGGGATCGATCGGGTGTAGGATTTGAGAATGGAAA
. : . : . : . : . : . :
JMFS035H10+ GCAAAT
JMFS045H06+ GCAAATTAGGGTTGAAATGCGT
JMFS131H04+ GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAG
JMFS074G03+ GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAA
JMSF018C02+ GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCG
JMSF009O15+ GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCG
JMSF003I12+ GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCGGTC
____________________________________________________________
consensus GCAAATTAGGGTTGAAATGCGTGAATTTTGATCGAGTGAGAATCTGAAGAATCGCCGGTC