Contig 000558:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043K09Sequence642000558 (5)ref|XP_002282510.2|9e-78PREDICTED: protein HOTHEAD [Vitis vinifera] emb|CBI34759.3| unnamed protein prod564001195 (2)gb|KDO63592.1|3e-70hypothetical protein CISIN_1g0081631mg, partial [Citrus sinensis] gb|KDO63593.1|
JMFF043O09Sequence640000558 (5)ref|XP_002282510.2|4e-77PREDICTED: protein HOTHEAD [Vitis vinifera] emb|CBI34759.3| unnamed protein prod606001195 (2)gb|KDO63592.1|4e-70hypothetical protein CISIN_1g0081631mg, partial [Citrus sinensis] gb|KDO63593.1|
JMFS094G06Sequence624000558 (5)ref|XP_002282510.2|1e-100PREDICTED: protein HOTHEAD [Vitis vinifera] emb|CBI34759.3| unnamed protein prod
JMSF002O05Sequence313000558 (5)ref|XP_002282510.2|1e-21PREDICTED: protein HOTHEAD [Vitis vinifera] emb|CBI34759.3| unnamed protein prod
JMSF030F04Sequence606000558 (5)gb|KDO63587.1|3e-90hypothetical protein CISIN_1g0081632mg, partial [Citrus sinensis]

Alignment

This contig is upended


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JMFF043O09+                                                    CGTACATATGGTCGTAAGT
JMFS094G06+                                                              GTCGTAAGT
JMFF043K09+                                                  ACCGTACATATGGTCGTAAGT
                      ____________________________________________________________
consensus                                                    ACCGTACATATGGTCGTAAGT
 
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JMFF043O09+           GAAGCCATTGTACGGCGTGACCCCAGCCTCCAGCAGCCCATCTCTGACGGCCGACTGCCA
JMFS094G06+           GAAGCCATTGTACGGCGTGACCCCAGCCTCCAGCAGCCCATCTCTGACGGCCGACTGCCA
JMFF043K09+           GAAGCCATTGTACGGCGTGACCCCAGCCTCCAGCAGCCCATCTCTGACGGCCGACTGCCA
JMSF030F04+                                       TCCAGCAGCCCATCTCTGACGGCCGACTGCCA
                      ____________________________________________________________
consensus             GAAGCCATTGTACGGCGTGACCCCAGCCTCCAGCAGCCCATCTCTGACGGCCGACTGCCA
 
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JMFF043O09+           CTCCCTCACCGGCGGCATAAACGCTACCTTTTTCTCCACCCACTGGTACGACTCGTTGAC
JMFS094G06+           CTCCCTCACCGGCGGCATAAACGCTACCTTTTTCTCCACCCACTGGTACGACTCGTTGAC
JMFF043K09+           CTCCCTCACCGGCGGCATAAACGCTACCTTTTTCTCCACCCACTGGTACGACTCGTTGAC
JMSF030F04+           CTCCCTCACCGGCGGCATAAACGCTACCTTTTTCTCCACCCACTGGTACGACTCGTTGAC
                      ____________________________________________________________
consensus             CTCCCTCACCGGCGGCATAAACGCTACCTTTTTCTCCACCCACTGGTACGACTCGTTGAC
 
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JMFF043O09+           CAGCCGGCCGTCCC-CCCCACGTCGCTCACGTAATCCGGCGACGCGCGCGTGTAGAACCC
JMFS094G06+           CAGCCGGCCGTCCCACCCCACGTCGCTCACGTAATCCGGCGACGCGCGCGTGTAGAACCC
JMFF043K09+           CAGCCGGCCGTCCC-CCCCACGTCGCTCACGTAATCCGGCGACGCGCGCGTGTAGAACCC
JMSF030F04+           CAGCCGGCCGTCCCACCCCACGTCGCTCACGTAATCCGGCGACGCGCGCGTGTAGAACCC
                      ____________________________________________________________
consensus             CAGCCGGCCGTCCCACCCCACGTCGCTCACGTAATCCGGCGACGCGCGCGTGTAGAACCC
 
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JMFF043O09+           CGCGTTCAGGCAGCTCCCGCCGCCCAGAACGCGTGCGCGCGCGTTTATCACCCCGTCCTC
JMFS094G06+           CGCGTTCAGGCAGCTCCCGCCGCCCAGAACGCGTGCGCGCGCGTTTATCACCCCGTCCTC
JMFF043K09+           CGCGTTCAGGCAGCTCCCGCCGCCCAGAACGCGTGCGCGCGCGTTTATCACCCCGTCCTC
JMSF030F04+           CGCGTTCAGGCAGCTCCCGCCGCCCAGAACGCGTGCGCGCGCGTTTATCACCCCGTCCTC
                      ____________________________________________________________
consensus             CGCGTTCAGGCAGCTCCCGCCGCCCAGAACGCGTGCGCGCGCGTTTATCACCCCGTCCTC
 
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JMFF043O09+           GGACACGAAGCGCTGCGACGGCGAGGTCGGCGAGAGGTCGGAGAGGGCAACGCCGAACGA
JMFS094G06+           GGACACGAAGCGCTGCGACGGCGAGGTCGGCGAGAGGTCGGAGAGGGCAACGCCGAACGA
JMFF043K09+           GGACACGAAGCGCTGCGACGGCGAGGTCGGCGAGAGGTCGGAGAGGGCAACGCCGAACGA
JMSF030F04+           GGACACGAAGCGCTGCGACGGCGAGGTCGGCGAGAGGTCGGAGAGGGCAACGCCGAACGA
                      ____________________________________________________________
consensus             GGACACGAAGCGCTGCGACGGCGAGGTCGGCGAGAGGTCGGAGAGGGCAACGCCGAACGA
 
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JMFF043O09+           CGACAAGTTGGTGATGTTGGGATTGCCGTACGGTGAACCTCCCCGCTCCAGCAGAAGAAC
JMFS094G06+           CGACAAGTTGGTGATGTTGGGATTGCCGTACGGTGAACCTCCCCGCTCCAGCAGAAGAAC
JMFF043K09+           CGACAAGTTGGTGATGTTGGGATTGCCGTACGGTGAACCTCCCCGCTCCAGCAGAAGAAC
JMSF030F04+           CGACAAGTTGGTGATGTTGGGATTGCCGTACGGTGAACCTCCCCGCTCCAGCAGAAGAAC
JMSF002O05+                                                          CCAGCAGAAGAAC
                      ____________________________________________________________
consensus             CGACAAGTTGGTGATGTTGGGATTGCCGTACGGTGAACCTCCCCGCTCCAGCAGAAGAAC
 
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JMFF043O09+           GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
JMFS094G06+           GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
JMFF043K09+           GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
JMSF030F04+           GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
JMSF002O05+           GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
                      ____________________________________________________________
consensus             GCTGTAGTTCTGCGACAGCGTCGCCGCCAACGGACACCCGGCGGTGCCGCCTCCGATGAT
 
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JMFF043O09+           GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
JMFS094G06+           GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
JMFF043K09+           GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
JMSF030F04+           GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
JMSF002O05+           GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
                      ____________________________________________________________
consensus             GATGTAATCATAGTGCGACACTTTCGGCGCCGCCGTTGCTTGGTGCATGAAGGAGTAATC
 
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JMFF043O09+           CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
JMFS094G06+           CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
JMFF043K09+           CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
JMSF030F04+           CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
JMSF002O05+           CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
                      ____________________________________________________________
consensus             CGGAGCTGTTTCAGAAACAGAAGACGAGACATGGAGAATTAGAAGTCCAAGAAACGCAAG
 
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JMFF043O09+           ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
JMFS094G06+           ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
JMFF043K09+           ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
JMSF030F04+           ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
JMSF002O05+           ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
                      ____________________________________________________________
consensus             ATTGAGCGATTTACAGAGACCCAATGCCATGACGATGATGATGATGATTGATGAGAGAGA
 
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JMFF043O09+           GAAGAGGGAGAGTCTGGAATCT                                      
JMFS094G06+           GAAGAGGGAGAGTCT                                             
JMFF043K09+           GAAGAGGGAGAGTCTGGAATCT                                      
JMSF030F04+           GAAGAGGGAGAGTCTGGAATCTGCAGTAGTC                             
JMSF002O05+           GAAGAGGGAGAGTCTGGAATCTGCAGTAGTCTGGTACTCTGGTTGCTTTGATGAGAGCTC
                      ____________________________________________________________
consensus             GAAGAGGGAGAGTCTGGAATCTGCAGTAGTCTGGTACTCTGGTTGCTTTGATGAGAGCTC