Contig 000557:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF033C20+                                                              GACTTCAGC
                      ____________________________________________________________
consensus                                                                GACTTCAGC
 
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JMSF030B13+                                   TCGCCATACATAATCCCTGCTAATAGGCCACCTTAT
JMSF033C20+           AAGATGTGAATGGTTGACATTGCTTCGCCATACATAATCCCTGCTAATAGGCCACCTTAT
                      ____________________________________________________________
consensus             AAGATGTGAATGGTTGACATTGCTTCGCCATACATAATCCCTGCTAATAGGCCACCTTAT
 
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JMSF030B13+           TGGTATCTTATAATCAACTGGAGGTGGCACCAAACAAAACAAGCGCCTCTTTACTGGAGG
JMSF033C20+           TGGTATCTTATAATCAACTGGAGGTGGCACCAAACAAAACAAGCGCCTCTTTACTGGAGG
                      ____________________________________________________________
consensus             TGGTATCTTATAATCAACTGGAGGTGGCACCAAACAAAACAAGCGCCTCTTTACTGGAGG
 
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JMSF030B13+           ACAATGCCTCTCAAGCTCTTCCCTCCTTGAAAGATTTAATTTTGGCAGTAACTCTTTAAC
JMSF033C20+           ACAATGCCTCTCAAGCTCTTCCCTCCTTGAAAGATTTAATTTTGGCAGTAACTCTTTAAC
                      ____________________________________________________________
consensus             ACAATGCCTCTCAAGCTCTTCCCTCCTTGAAAGATTTAATTTTGGCAGTAACTCTTTAAC
 
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JMSF030B13+           ATAAGATACATCATTACAAGGAATATACTCATTGAAATTCAGAGGGCAAACATTCATTCC
JMSF033C20+           ATAAGATACATCATTACAAGGAATATACTCATTGAAATTCAGAGGGCAAACATTCATTCC
                      ____________________________________________________________
consensus             ATAAGATACATCATTACAAGGAATATACTCATTGAAATTCAGAGGGCAAACATTCATTCC
 
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JMSF030B13+           AGTTTTTGGGATAGTTAGTGGTACGATTCGATAAGTAAGAGCAACTTTGTTTGTAAATGT
JMSF033C20+           AGTTTTTGGGATAGTTAGTGGTACGATTCGATAAGTAAGAGCAACTTTGTTTGTAAATGT
                      ____________________________________________________________
consensus             AGTTTTTGGGATAGTTAGTGGTACGATTCGATAAGTAAGAGCAACTTTGTTTGTAAATGT
 
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JMSF030B13+           TGGACTACCAGAGGGGGTTTGTGATGAGTTGGGATTGGAAGAGACTGCAATTTGCTGTTC
JMSF033C20+           TGGACTACCAGAGGGGGTTTGTGATGAGTTGGGATTGGAAGAGACTGCAATTTGCTGTTC
                      ____________________________________________________________
consensus             TGGACTACCAGAGGGGGTTTGTGATGAGTTGGGATTGGAAGAGACTGCAATTTGCTGTTC
 
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JMSF030B13+           TTGTTGCGGCTGTTGCTGAAGCGTATAGAGGGGAGAAGAAGAATCGGTGGTGCTGAAGAG
JMSF033C20+           TTGTTGCGGCTGTTGCTGAAGCGTATAGAGGGGAGAAGAAGAATCGGTGGTGCTGAAGAG
                      ____________________________________________________________
consensus             TTGTTGCGGCTGTTGCTGAAGCGTATAGAGGGGAGAAGAAGAATCGGTGGTGCTGAAGAG
 
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JMSF030B13+           AGTGCCGGTGTAGAAAGATCCAATCATTACCAAAAGAGACACCATTATCGTCTGCCCCGC
JMSF033C20+           AGTGCCGGTGTAGAAAGATCCAATCATTACCAAAAGAGACACCATTATCGTCTGCCCCGC
JMSF002N17+                 GGTGTAGAAAGATCCAATCANTACCAAAAGAGACACCATTATCGTCTGCCCCGC
                      ____________________________________________________________
consensus             AGTGCCGGTGTAGAAAGATCCAATCATTACCAAAAGAGACACCATTATCGTCTGCCCCGC
 
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JMSF030B13+           CTTCCAATCGAATGCCCTCATGTTTATCAATGACCCTCCTCCCCCCATTTCTCTCTACAC
JMSF033C20+           CTTCCAATCGAATGCCCTCATGTTTATCAATGACCCTCCTCCCCCCATTTCTCTCTACAC
JMSF002N17+           CTTCCAATCGAATGCCCTCATGTTTATCAATGACCCTCCTCCCCCCATTTCTCTCTACAC
                      ____________________________________________________________
consensus             CTTCCAATCGAATGCCCTCATGTTTATCAATGACCCTCCTCCCCCCATTTCTCTCTACAC
 
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JMSF030B13+           CAATATATATGAATACTCAAAGTTGAAGTATTAACTCATTGTACAGAAAGCTCTGAGTTG
JMSF033C20+           CAATATATATGAATACTCAAAGTTGAAGTATTAACTCATTGTACAGAAAGCTCTGAGTTG
JMSF002N17+           CAATATATATGAATACTCAAAGTTGAAGTATTAACTCATTGTACAGAAAGCTCTGAGTTG
                      ____________________________________________________________
consensus             CAATATATATGAATACTCAAAGTTGAAGTATTAACTCATTGTACAGAAAGCTCTGAGTTG
 
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JMSF030B13+           CAGAAGCTAAGCATATCTTGCTTATAGTGAGATAGGTCGAGAGATCCAAATCGGTGCAGC
JMSF033C20+           CAGAAGCTAAGCATATCTTGCTTATAGTGAGATAGGTCGAGAGATCCAAATCGGTGCAGC
JMSF002N17+           CAGAAGCTAAGCATATCTTGCTTATAGTGAGATAGATCGAGAGATCCAAATCGGTGCAGC
                      ____________________________________________________________
consensus             CAGAAGCTAAGCATATCTTGCTTATAGTGAGATAGGTCGAGAGATCCAAATCGGTGCAGC
 
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JMSF030B13+           TCAGATTATGATTTTTGAG                                         
JMSF033C20+           TCAGATTATGATTTTTGAG                                         
JMSF002N17+           TCAGATTATGATTTTTGAGGCAGTCTGAAATTCGTTTTTTCCGTTTTTAATTTTTATTCA
                      ____________________________________________________________
consensus             TCAGATTATGATTTTTGAGGCAGTCTGAAATTCGTTTTTTCCGTTTTTAATTTTTATTCA