Contig 000556:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF029A01+                                                              TTACAATAC
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consensus                                                                TTACAATAC
 
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JMSF029A01+           AGTNNTCCAATTCCCCAAATTNGCACATGTATTNTNTTAAGCCCTCGGTATCAATGTCCC
                      ____________________________________________________________
consensus             AGTNNTCCAATTCCCCAAATTNGCACATGTATTNTNTTAAGCCCTCGGTATCAATGTCCC
 
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JMSF029A01+           AAGGGATACCCAAAACAACAAGCTTCNTATCCGACATGGTAAAAGGGGGCGCAAAGACAA
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consensus             AAGGGATACCCAAAACAACAAGCTTCNTATCCGACATGGTAAAAGGGGGCGCAAAGACAA
 
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JMSF029A01+           ATCTAGCTGCAGAGATAAAAAATCGNTCGAGACACACACAATTTNTNTCCTCTGTTCCTC
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consensus             ATCTAGCTGCAGAGATAAAAAATCGNTCGAGACACACACAATTTNTNTCCTCTGTTCCTC
 
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JMSF029A01+           TTGCGCTCTNGCGATCCCACCACCTCCCTCTCTACAAATCAAGCGCTCACACTCGACGAC
                      ____________________________________________________________
consensus             TTGCGCTCTNGCGATCCCACCACCTCCCTCTCTACAAATCAAGCGCTCACACTCGACGAC
 
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JMSF029A01+           GATGAGGAGAAATCCTGCACACAACACACACACCTCTTTCTCACACAAAAACATCATCAT
JMSF006O17+                                               TTTCTCACACAAAAACATCATCAT
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consensus             GATGAGGAGAAATCCTGCACACAACACACACACCTCTTTCTCACACAAAAACATCATCAT
 
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JMSF029A01+           CATCATCTTCATCATATACCACAAAAAACTCACCATTTTTCTTTCTAGAATTCTCAGGTC
JMSF006O17+           CATCATCTTCATCATATACCACAAAAAACTCACCATTTTTCTTTCTAGAATTCTCAGGTC
                      ____________________________________________________________
consensus             CATCATCTTCATCATATACCACAAAAAACTCACCATTTTTCTTTCTAGAATTCTCAGGTC
 
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JMSF029A01+           AAAGGAACATACAAATGTTATGGAAGAAATTTAAGCGCACACACTAACCTTGGGCGATTC
JMSF006O17+           AAAGGAACATACAAATGTTATGGAAGAAATTTAAGCGCACACACTAACCTTGGGCGATTC
JMSF006N17+                                                            TTGGGCGATTC
JMSF002M22+                                                          CCTTGGGCGATTC
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consensus             AAAGGAACATACAAATGTTATGGAAGAAATTTAAGCGCACACACTAACCTTGGGCGATTC
 
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JMSF029A01+           AGATTTTCAAAACCCTAACTCGCTCTCTCTCGCTCGCTAACTCGCTCGACTCGCGCTCTT
JMSF006O17+           AGATTTTCAAAACCCTAACTCGCTCTCTCTCGCTCGCTAACTCGCTCGACTCGCGCTCTT
JMSF006N17+           AGATTTTCAAAACCCTAACTCGCTCTCTCTCGCTCGCTAACTCGCTCGACTCGCGCTNTT
JMSF002M22+           AGATTTTCAAAACCCTAACTCGCTCTCTCTCGCTCGCTAACTCGCTCGACTCGCGCTCTT
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consensus             AGATTTTCAAAACCCTAACTCGCTCTCTCTCGCTCGCTAACTCGCTCGACTCGCGCTCTT
 
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JMSF029A01+           CCTCTCGCCGCTCAGCGACTCCGTTTCAAACCCAATCTACTCATCCTGTACCCAACTCCC
JMSF006O17+           CCTCTCGCCGCTCAGCGACTCCGTTTCAAACCCAATCTACTCATCCTGTACCCAACTCCC
JMSF006N17+           CCTCTCGCCGCTCAGCGACTCCGTTTCAAACCCAATCTACTCATCCTGTACCCAACTCCC
JMSF002M22+           CCTCTCGCCGCTCAGCGACTCCGTTTCAAACCCAATCTACTCATCCTGTACCCAACTCCC
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consensus             CCTCTCGCCGCTCAGCGACTCCGTTTCAAACCCAATCTACTCATCCTGTACCCAACTCCC