Contig 000553:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS084E03Sequence627000553 (3)ref|XP_009803147.1|5e-70PREDICTED: actin-related protein 9 isoform X2 [Nicotiana sylvestris]
JMSF002G19Sequence389000553 (3)ref|XP_011091179.1|4e-41PREDICTED: actin-related protein 9 [Sesamum indicum]164012633 (3)ref|XP_006354524.1|3e-22PREDICTED: actin-related protein 9-like [Solanum tuberosum]
JMSF025J17Sequence649000553 (3)ref|XP_009803147.1|3e-70PREDICTED: actin-related protein 9 isoform X2 [Nicotiana sylvestris]790012633 (3)ref|XP_009803146.1|4e-145PREDICTED: actin-related protein 9 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS084E03+ AGTTCCATGGTATTGTTGTTTTCCTTTGTGATGGGGGGC
JMSF025J17+ ACCTGAACTTAGTTCCATGGTATTGTTGTTTTCCTTTGTGATGGGGGGC
                      ____________________________________________________________
consensus ACCTGAACTTAGTTCCATGGTATTGTTGTTTTCCTTTGTGATGGGGGGC
 
. : . : . : . : . : . :
JMFS084E03+ TCAGAAGTTTCACCATTGGTTATGCTATTATCTCCTCCTGATGAAGGTGGAGGGGGAGGG
JMSF025J17+ TCAGAAGTTTCACCATTGGTTATGCTATTATCTCCTCCTGATGAAGGTGGAGGGGGAGGG
                      ____________________________________________________________
consensus TCAGAAGTTTCACCATTGGTTATGCTATTATCTCCTCCTGATGAAGGTGGAGGGGGAGGG
 
. : . : . : . : . : . :
JMFS084E03+ GTGTTTTCAAACACCTCAGTCCAAGTGAACGGTATCTCTTTCTTGTTATTTTGTGGAGGA
JMSF025J17+ GTGTTTTCAAACACCTCAGTCCAAGTGAACGGTATCTCTTTCTTGTTATTTTGTGGAGGA
                      ____________________________________________________________
consensus GTGTTTTCAAACACCTCAGTCCAAGTGAACGGTATCTCTTTCTTGTTATTTTGTGGAGGA
 
. : . : . : . : . : . :
JMFS084E03+ TATGCATCAACTCGACCCATCTTCCGAGGATAAGAGCTATTAGGAACCTCCTCATCCAGG
JMSF025J17+ TATGCATCAACTCGACCCATCTTCCGAGGATAAGAGCTATTAGGAACCTCCTCATCCAGG
                      ____________________________________________________________
consensus TATGCATCAACTCGACCCATCTTCCGAGGATAAGAGCTATTAGGAACCTCCTCATCCAGG
 
. : . : . : . : . : . :
JMFS084E03+ AACGGAATTTTCAACAGTGATGCAATAATGTCATAAGCCCTTTCGCGCTCCATATGCTGT
JMSF025J17+ AACGGAATTTTCAACAGTGATGCAATAATGTCATAAGCCCTTTCGCGCTCCATATGCTGT
JMSF002G19+ CATAAGCCCTTTCGCGCTCCATATGCTGT
                      ____________________________________________________________
consensus AACGGAATTTTCAACAGTGATGCAATAATGTCATAAGCCCTTTCGCGCTCCATATGCTGT
 
. : . : . : . : . : . :
JMFS084E03+ GCGGTTGTAACCTGAGAATTGAGCATTTGATCCTGGACATTTCTTTTAGGCACTTGGCTG
JMSF025J17+ GCGGTTGTAACCTGAGAATTGAGCATTTGATCCTGGACATTTCTTTTAGGCACTTGGCTG
JMSF002G19+ GCGGTTGTAACCTGAGAATTGAGCATTTGATCCTGGACATTTCTTTTAGGCACTTGGCTG
                      ____________________________________________________________
consensus GCGGTTGTAACCTGAGAATTGAGCATTTGATCCTGGACATTTCTTTTAGGCACTTGGCTG
 
. : . : . : . : . : . :
JMFS084E03+ GTTCGACGAGCAATGCAATGAGGAATGTTCAGTGGACTGTCCTGTTGAGCTCGTCCTATT
JMSF025J17+ GTTCGACGAGCAATGCAATGAGGAATGTTCAGTGGACTGTCCTGTTGAGCTCGTCCTATT
JMSF002G19+ GTTCGACGAGCAATGCAATGAGGAATGTTCAGTGGACTGTCCTGTTGAGCTCGTCCTATT
                      ____________________________________________________________
consensus GTTCGACGAGCAATGCAATGAGGAATGTTCAGTGGACTGTCCTGTTGAGCTCGTCCTATT
 
. : . : . : . : . : . :
JMFS084E03+ CTAATATTTGCAGAACCTGGATTGATGACGACGAGATTGGAGCCGCGCTCCGCGAGGAGC
JMSF025J17+ CTAATATTTGCAGAACCTGGATTGATGACGACGAGATTGGAGCCGCGCTCCGCGAGGAGC
JMSF002G19+ CTAATATTTGCAGAACCTGGATTGATGACGACGAGATTGGAGCCGCGCTCCGCGAGGAGC
                      ____________________________________________________________
consensus CTAATATTTGCAGAACCTGGATTGATGACGACGAGATTGGAGCCGCGCTCCGCGAGGAGC
 
. : . : . : . : . : . :
JMFS084E03+ TGAGAAGGTACTACTGTTTTCAGGTAATCCTGATTAAACGCCATAATCGCGATAATTACT
JMSF025J17+ TGAGAAGGTACTACTGTTTTCAGGTAATCCTGATTAAACGCCATAATCGCGATAATTACT
JMSF002G19+ TGAGAAGGTACTACTGTTTTCAGGTAATCCTGATTAAACGCCATAATCGCGATAATTACT
                      ____________________________________________________________
consensus TGAGAAGGTACTACTGTTTTCAGGTAATCCTGATTAAACGCCATAATCGCGATAATTACT
 
. : . : . : . : . : . :
JMFS084E03+ CTTGGCTGAGCTTTTCTGTATATCTTCAGAAGAATAGGGAGGAGGGAAATAGGTATTAGC
JMSF025J17+ CTTGGCTGAGCTTTTCTGTATATCTTCAGAAGAATAGGGAGGAGGGAAATAGGTATTAGC
JMSF002G19+ CTTGGCTGAGCTTTTCTGTATATCTTCAGAAGAATAGGGAGGAGGGAAATAGGTATTAGC
                      ____________________________________________________________
consensus CTTGGCTGAGCTTTTCTGTATATCTTCAGAAGAATAGGGAGGAGGGAAATAGGTATTAGC
 
. : . : . : . : . : . :
JMFS084E03+ TATTCTGCAACGGCGCCAAAATTGTCCGACGGCTTGCCAGTGCCAGAG
JMSF025J17+ TATTCTGCAACGGCGCCAAAATTGTCCGACGGCTTGCCAGTGCCAGAGCTCGGAGCATCC
JMSF002G19+ TATTCTGCAACGGCGCCAAAATTGTCCGACGGCTTGCCAGTGCCAGAGCTCGGAGCATCC
                      ____________________________________________________________
consensus TATTCTGCAACGGCGCCAAAATTGTCCGACGGCTTGCCAGTGCCAGAGCTCGGAGCATCC