Contig 000550:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D09Sequence544000550 (4)emb|CDP00753.1|3e-51unnamed protein product [Coffea canephora]
JMFF014F03Sequence595000550 (4)emb|CDP00753.1|2e-61unnamed protein product [Coffea canephora]
JMSF002D11Sequence237000550 (4)emb|CDP00753.1|1e-17unnamed protein product [Coffea canephora]
JMSF041K07Sequence819000550 (4)ref|XP_006360416.1|3e-81PREDICTED: U-box domain-containing protein 10-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF041K07+                                                                 CGTGCA
                      ____________________________________________________________
consensus                                                                   CGTGCA
 
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JMSF041K07+           CAGAACCAGAAATTCCCCGGGACACAATCCTCGGGTGATGATGGCGAATTCATCGCGCTT
                      ____________________________________________________________
consensus             CAGAACCAGAAATTCCCCGGGACACAATCCTCGGGTGATGATGGCGAATTCATCGCGCTT
 
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JMSF041K07+           TCTGATTCGAGAATCGTCCTACTAGAACCACAGTCGTTTGTGCCATTAACTAACGGGACT
                      ____________________________________________________________
consensus             TCTGATTCGAGAATCGTCCTACTAGAACCACAGTCGTTTGTGCCATTAACTAACGGGACT
 
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JMSF041K07+           GGAATTCCCCCCGTCTTTGCTCTAACTTCATGATCGATGTTGCCAATATTTTCTATGTGC
                      ____________________________________________________________
consensus             GGAATTCCCCCCGTCTTTGCTCTAACTTCATGATCGATGTTGCCAATATTTTCTATGTGC
 
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JMSF041K07+           AAACTTCCGATTGCCCTGTTGCTTGGCTGAAGGTGAAGGGGATCTATTTCTTTATCCAAG
                      ____________________________________________________________
consensus             AAACTTCCGATTGCCCTGTTGCTTGGCTGAAGGTGAAGGGGATCTATTTCTTTATCCAAG
 
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JMSF041K07+           GGCTGGGATAGTGTGCGAGCTAATATAGTCGAATTTATAGGCCCACCGTATCTTTCTGTG
JMFF013D09+                                                              CTTTCTGTG
JMFF014F03+           GGCTGGGATAGTGTGCGAGCTAATATAGTCGAATTTATAGGCCCACCGTATCTTTCTGTG
                      ____________________________________________________________
consensus             GGCTGGGATAGTGTGCGAGCTAATATAGTCGAATTTATAGGCCCACCGTATCTTTCTGTG
 
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JMSF041K07+           GCTCTTCTCAACTGTGCCCTGAGCAAGTGAACCTGTTCCGTTACTTCCTCGGATATGTCT
JMFF013D09+           GCTCTTCTCAACTGTGCCCTGAGCAAGTGAACCTGTTCCGTTACTTCCTCGGATATGTCT
JMFF014F03+           GCTCTTCTCAACTGTGCCCTGAGCAAGTGAACCTGTTCCGTTACTTCCTCGGATATGTCT
                      ____________________________________________________________
consensus             GCTCTTCTCAACTGTGCCCTGAGCAAGTGAACCTGTTCCGTTACTTCCTCGGATATGTCT
 
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JMSF041K07+           AAATGATCATATGGAAAGTTTCCCAGGGCCTTCTCCAATTTCCAAGTCACACATTGAAAT
JMFF013D09+           AAATGATCATATGGAAAGTTTCCCAGGGCCTTCTCCAATTTCCAAGTCACACATTGAAAT
JMFF014F03+           AAATGATCATATGGAAAGTTTCCCAGGGCCTTCTCCAATTTCCAAGTCACACATTGAAAT
                      ____________________________________________________________
consensus             AAATGATCATATGGAAAGTTTCCCAGGGCCTTCTCCAATTTCCAAGTCACACATTGAAAT
 
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JMSF041K07+           TGAAAATGGATTTTCTTCATCACCCCATCAGATGAGATCTTGGAATCAATGTCGTTAGCC
JMFF013D09+           TGAAAATGGATTTTCTTCATCACCCCATCAGATGAGATCTTGGAATCAATGTCGTTAGCC
JMFF014F03+           TGAAAATGGATTTTCTTCATCACCCCATCAGATGAGATCTTGGAATCAATGTCGTTAGCC
                      ____________________________________________________________
consensus             TGAAAATGGATTTTCTTCATCACCCCATCAGATGAGATCTTGGAATCAATGTCGTTAGCC
 
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JMSF041K07+           GTGAGGAGAACCCTTTTAGCAGCCTGGAGAGCTAGCGAGAGATCAGACAAGCAAGACCCG
JMFF013D09+           GTGAGGAGAACCCTTTTAGCAGCCTGGAGAGCTAGCGAGAGATCAGACAAGCAAGACCCG
JMFF014F03+           GTGAGGAGAACCCTTTTAGCAGCCTGGAGAGCTAGCGAGAGATCAGACAAGCAAGACCCG
                      ____________________________________________________________
consensus             GTGAGGAGAACCCTTTTAGCAGCCTGGAGAGCTAGCGAGAGATCAGACAAGCAAGACCCG
 
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JMSF041K07+           GAAGACGAAGACGAAGAAGATGAAGAAGAAGAAGAGCCCATAACCAAATGGGCCTTGAAA
JMFF013D09+           GAAGACGAAGACGAAGAAGATGAAGAAGAAGAAGAGCCCATAACCAAATGGGCCTTGAAA
JMFF014F03+           GAAGACGAAGACGAAGAAGATGAAGAAGAAGAAGAGCCCATAACCAAATGGGCCTTGAAA
                      ____________________________________________________________
consensus             GAAGACGAAGACGAAGAAGATGAAGAAGAAGAAGAGCCCATAACCAAATGGGCCTTGAAA
 
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JMSF041K07+           TCTCTGATCTCCTCAAGCAAATGAGCAAGAAGTGAGACCCTGCGAGCTAAATCCGTGCAG
JMFF013D09+           TCTCTGATCTCCTCAAGCAAATGAGCAAGAAGTGAGACCCTGCGAGCTAAATCCGTGCAG
JMFF014F03+           TCTCTGATCTCCTCAAGCAAATGAGCAAGAAGTGAGACCCTGCGAGCTAAATCCGTGCAG
JMSF002D11+              CTGATCTCCTCAAGCAAATGAGCAAGAAGTGAGACCCTGCGAGCTAAATCCGTGCAG
                      ____________________________________________________________
consensus             TCTCTGATCTCCTCAAGCAAATGAGCAAGAAGTGAGACCCTGCGAGCTAAATCCGTGCAG
 
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JMSF041K07+           TCTCTCTTGAAGGCGCCCGAGAAGCCCGAGCCGGAGATCCGCACTACGTCGTGAACTGCC
JMFF013D09+           TCTCTCTTGAAGGCGCCCGAGAAGCCCGAGCCGGAGATCCGCACTACGTCGTGAACTGCC
JMFF014F03+           TCTCTCTTGAAGGCGCCCGAGAAGCCCGAGCCGGAGATCCGCACTACGTCGTGAACTGCC
JMSF002D11+           TCTCTCTTGAAGGCGCCCGAGAAGCCCGAGCCGGAGATCCGCACTACGTCGTGAACTGCC
                      ____________________________________________________________
consensus             TCTCTCTTGAAGGCGCCCGAGAAGCCCGAGCCGGAGATCCGCACTACGTCGTGAACTGCC
 
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JMSF041K07+           CGGAGAGCGGTCTCGATGGACTCACCGGCGACGGCGGCGATGGTGTCTCCGCCGGCCATT
JMFF013D09+           CGGAGAGCGGTCTCGATGGACTCACCGGCGACGGCGGCGATGGTGTCTCCGCCGGCCATT
JMFF014F03+           CGGAGAGCGGTCTCGATGGACTCACCGGCGACGGCGGCGATGGTGTCTCCGCCGGCCATT
JMSF002D11+           CGGAGAGCGGTCTCGATGGACTCACCGGCGACGGCGGCGATGGTGTCTCCGCCGGCCATT
                      ____________________________________________________________
consensus             CGGAGAGCGGTCTCGATGGACTCACCGGCGACGGCGGCGATGGTGTCTCCGCCGGCCATT
 
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JMSF041K07+           CTTGTTGGTTGGTGGTGCTGTGAACTGGGATCC                           
JMFF013D09+           CTTGTTGGTTGGTGGTGCTGTGAACTGGGATCCGTATTTACAACCACAATG         
JMFF014F03+           CTTGTTGGTTGGTGGTGCTGTGAACTGGGATCCGTATTTACAACCACAATG         
JMSF002D11+           CTTGTTGGTTGGTGGTGCTGTGAACTGGGATCCGTATTTACAACCACAATGTCGTGAATC
                      ____________________________________________________________
consensus             CTTGTTGGTTGGTGGTGCTGTGAACTGGGATCCGTATTTACAACCACAATGTCGTGAATC