Contig 000547: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF002A01- GGCCCTTTCCCACGTTCTTTCNCACCCTCC
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consensus GGCCCTTTCCCACGTTCTTTCNCACCCTCC
. : . : . : . : . : . :
rJMSF002A01- ATCCTATCATCACGCAATCTCCTGCGTTCTTCCACCAATCTAGCAACTTCCTCTCNTTGG
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consensus ATCCTATCATCACGCAATCTCCTGCGTTCTTCCACCAATCTAGCAACTTCCTCTCNTTGG
. : . : . : . : . : . :
rJMSF002A01- ATTCTTTCTTCTTCCTCCAATAGTTCTTTCTCTAATCTAGCCAGCCTCTTCTCCTCTGCT
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consensus ATTCTTTCTTCTTCCTCCAATAGTTCTTTCTCTAATCTAGCCAGCCTCTTCTCCTCTGCT
. : . : . : . : . : . :
rJMSF002A01- TTTCTTCGGGCTCTCTCCCCTTTACGCTCTTGAAAATTTTCTCCATTCTCACCTTTGTTA
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consensus TTTCTTCGGGCTCTCTCCCCTTTACGCTCTTGAAAATTTTCTCCATTCTCACCTTTGTTA
. : . : . : . : . : . :
rJMSF002A01- TCCAGCATTCCTCTCTGTTCTGCATCTGTAGAAGTATCATCTCTGGAAGAACCAATCCTA
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consensus TCCAGCATTCCTCTCTGTTCTGCATCTGTAGAAGTATCATCTCTGGAAGAACCAATCCTA
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rJMSF002A01- AAAATCTTTCTGTAAAGCCACATGATACTCATGAAAAAAGCTGCAAATGCCTTGACAACA
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consensus AAAATCTTTCTGTAAAGCCACATGATACTCATGAAAAAAGCTGCAAATGCCTTGACAACA
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rJMSF002A01- AAAAGCAAAACACGAGAACAATAATTTTCTGCTAAATAATGATCTTCCACAAAAAACCCA
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consensus AAAAGCAAAACACGAGAACAATAATTTTCTGCTAAATAATGATCTTCCACAAAAAACCCA
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rJMSF002A01- GTGCCTTTCTTGCCCCAGTCACTTGATCTCCCCTGGAAAGAACCCCCAACCCAATTTCTG
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consensus GTGCCTTTCTTGCCCCAGTCACTTGATCTCCCCTGGAAAGAACCCCCAACCCAATTTCTG
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rJMSF002A01- TTCTCTAGCCAATCCTGCCCGTATATCCATCCACTATCAGACTGAACCTTTCCTTTCAAT
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consensus TTCTCTAGCCAATCCTGCCCGTATATCCATCCACTATCAGACTGAACCTTTCCTTTCAAT
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rJMSF002A01- ATCTTCCCACTTTTTCCTACCAAGTCATTCAAAATCCTAGAATTTGAAAGGTCAAATCCT
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consensus ATCTTCCCACTTTTTCCTACCAAGTCATTCAAAATCCTAGAATTTGAAAGGTCAAATCCT
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rJMSF002A01- TGAGGAACAGGTAAGTCCAAGACTGGTCTCTTAGAGATGTGCCCACAATATGAGCACATA
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consensus TGAGGAACAGGTAAGTCCAAGACTGGTCTCTTAGAGATGTGCCCACAATATGAGCACATA
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rJMSF002A01- AACTTCCCACCACCAGGATTCTGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
JMFS068A08+ TGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
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consensus AACTTCCCACCACCAGGATTCTGATCCCTGTATGGAGTGAAGCAATTTCTACATCTCTTT
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rJMSF002A01- GTGGNTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCT
JMFS068A08+ GTGGCTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCTTCTCCCTAAGC
JMSF040A23+ TAAGC
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consensus GTGGCTGTTTTCCTCAACTTCTGCATTTCAATCGCTTCAACCCTCTTCTTCTCCCTAAGC
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JMFS068A08+ ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATACCAGAAA
JMSF040A23+ ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATNCCAGAAA
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consensus ATAGCACTTCTCTTTGCCCGCCAAGCCGACAACCAAGGCATCAAAATCTCATACCAGAAA
. : . : . : . : . : . :
JMFS068A08+ AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
JMSF040A23+ AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
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consensus AGTGTCACCAAGAGTACAAAAACACAGGCCAGTCTCGGAGAAGTGATTTCAAATCTAAAA
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JMFS068A08+ GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
JMSF040A23+ GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
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consensus GCAGGCGGCAATGCCTGTGATAGTGCCCATAGACCAATCAATGGAATCACTAACCACGGC
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JMFS068A08+ AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
JMSF040A23+ AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
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consensus AACATAGCAGCAACCCTCCGAGACCATTTCTGAATCACACAAAGCATACACATTATCCCG
. : . : . : . : . : . :
JMFS068A08+ TAACCAACCCTACAATCCCCCAACCCGAGTAATTAGAGAAATAAAAACCAATCAGAACCC
JMSF040A23+ TAACCAACCNTACAATCCCCCAACCCGAGTANTTAGAGAAATAAAAACCAATCAGAACCC
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consensus TAACCAACCCTACAATCCCCCAACCCGAGTAATTAGAGAAATAAAAACCAATCAGAACCC
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JMFS068A08+ AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
JMSF040A23+ AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
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consensus AGCTGTAAATATCAGAAATTAGTTAAACCCCTATATTTATTATCTACAGCTCATGAAAAC
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JMFS068A08+ CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
JMSF040A23+ CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
JMSF002A01+ CAGTTACATCTCCAATCACAAA
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consensus CTAACCCCCTGCAATCCCTTTCTCTTCCCGAGCAAAACCAGTTACATCTCCAATCACAAA
. : . : . : . : . : . :
JMFS068A08+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
JMSF040A23+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
JMSF002A01+ TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
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consensus TTCATCGGCGGCGGCGGTCGGAACGGTGAGGTTCGTCGGTGAAATGAATGCTACACCGGT
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JMFS068A08+ ATACGACTATGGTAACACAGTAACAACGAAAAGA
JMSF040A23+ ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATNTGCAAAAATACC
JMSF002A01+ ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATCTGCAAAAATACC
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consensus ATACGACTATGGTAACACAGTAACAACGAAAAGAGTAAAAGGGAAATCTGCAAAAATACC