Contig 000546:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001O19Sequence193000546 (2)718009073 (2)ref|XP_006339177.1|103PREDICTED: uncharacterized protein LOC102588943 [Solanum tuberosum]
JMSF006C07Sequence258000546 (2)

Alignment

This contig is upended


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JMSF006C07+                                                     ATCTCAATAAAGAAGAAG
                      ____________________________________________________________
consensus                                                       ATCTCAATAAAGAAGAAG
 
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JMSF006C07+           GATGGGCGGCAGAGACAAGATCATGTGATACGAGGCCACCAGGGTGGATGGATATGTTAA
JMSF001O19+                                                          ATGGATATGTTAA
                      ____________________________________________________________
consensus             GATGGGCGGCAGAGACAAGATCATGTGATACGAGGCCACCAGGGTGGATGGATATGTTAA
 
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JMSF006C07+           AACATGGGTGTTTTCCTTGAACATATCAAACTCACAGACCACAGCGCAGAGAAACCGATA
JMSF001O19+           AACATGGGTGTTTTCCTTGAACATATCAAACTCACAGACCACAGCGCAGAGAAACCGATA
                      ____________________________________________________________
consensus             AACATGGGTGTTTTCCTTGAACATATCAAACTCACAGACCACAGCGCAGAGAAACCGATA
 
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JMSF006C07+           TGTTTGTTTCAGGACAGGCTGTTCCAGCTTTCCAGTTCCTGTTCCCTGTTGTTCTGGAAT
JMSF001O19+           TGTTTGTTTCAGGACAGGCTGTTCCAGCTTTCCAGTTCCTGTTCCCTGTTGTTCTGGAAT
                      ____________________________________________________________
consensus             TGTTTGTTTCAGGACAGGCTGTTCCAGCTTTCCAGTTCCTGTTCCCTGTTGTTCTGGAAT
 
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JMSF006C07+           ATGGATTGAGTCCAAAAATGAACCAGCAACAGAAGATGAGAAGAACAGCAGAGTTTTCTG
JMSF001O19+           ATGGATTGAGTCCAAAAATGAACCAGCAACAGAAGATGAGAAGAACAGCAGAGTTTTCTG
                      ____________________________________________________________
consensus             ATGGATTGAGTCCAAAAATGAACCAGCAACAGAAGATGAGAAGAACAGCAGAGTTTTCTG