Contig 000544:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001C01Sequence524000544 (13)ref|XP_009610057.1|2e-35PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]687000544 (13)emb|CDP14931.1|3e-45unnamed protein product [Coffea canephora]
JMFN036P08Sequence556000544 (13)ref|XP_011092614.1|1e-41PREDICTED: protein PAM68, chloroplastic [Sesamum indicum]
JMSF001K13Sequence315000544 (13)713000544 (13)ref|XP_009610057.1|1e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]
JMSF012L07Sequence517000544 (13)ref|XP_009610057.1|6e-20PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]724000544 (13)ref|XP_009610057.1|1e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]
JMSF020A19Sequence569000544 (13)ref|XP_009610057.1|4e-26PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]709000544 (13)ref|XP_009610057.1|2e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]
JMSF031A21Sequence671000544 (13)ref|XP_009610057.1|3e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]629000544 (13)emb|CDP14931.1|2e-45unnamed protein product [Coffea canephora]
JMSF036O17Sequence685000544 (13)ref|XP_009610057.1|4e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]727000544 (13)ref|XP_009610057.1|2e-46PREDICTED: protein PAM68, chloroplastic [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF001C01-                 TTTTGTGATTATAACCCTCACTAGTCTTACAATCTGAACATAGACAAGATAAT
rJMSF020A19-                                                               AGATAAT
                      ____________________________________________________________
consensus                    TTTTGTGATTATAACCCTCACTAGTCTTACAATCTGAACATAGACAAGATAAT
 
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rJMFF001C01-          TTTGTTATTTGCATATCATAAATTACTCGCAGAAGTTTAATAGTGGTGTCTCTGCCTCAA
rJMSF031A21-                                   CTCGCAGAAGTTTAATAGTGGTGTCTCTGCCTCAA
rJMSF020A19-          TTTGTTATTTGCATATCATAAATTACTCGCAGAAGTTTAATAGTGGTGTCTCTGCCTCAA
rJMSF036O17-                                   CTCGCAGAAGTTTAATAGTGGTGTCTCTGCCTCAA
rJMSF001K13-                                                        TGTCTCTGCCTCAA
                      ____________________________________________________________
consensus             TTTGTTATTTGCATATCATAAATTACTCGCAGAAGTTTAATAGTGGTGTCTCTGCCTCAA
 
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rJMFF001C01-          CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
rJMSF031A21-          CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
rJMSF020A19-          CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
rJMSF036O17-          CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
JMSF031A21+                               ATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
JMSF036O17+                 AATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
rJMSF001K13-          CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
rJMSF012L07-                         AGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
                      ____________________________________________________________
consensus             CAGCATAATACATAGAGTAAATGCAAAAATTAGAACCAAATGAAAACCAAAATGTTGAAA
 
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rJMFF001C01-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
rJMSF031A21-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
rJMSF020A19-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
rJMSF036O17-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
JMSF031A21+           TGAAGGTNGGATAGATAGATGTTGTTAATTCTTTTNGGAGCCACCCCAGATGGATTGCCA
JMFN036P08+                                                            ATGGATTGCCA
JMSF036O17+           TGAAGGTNGGATAGATAGATGTTGTTAATTCTTTTNGGAGCCACCCCAGATGGATTGCCA
rJMSF001K13-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
rJMSF012L07-          TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
                      ____________________________________________________________
consensus             TGAAGGTTGGATAGATAGATGTTGTTAATTCTTTTTGGAGCCACCCCAGATGGATTGCCA
 
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rJMFF001C01-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
rJMSF031A21-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
rJMSF020A19-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
rJMSF036O17-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
JMSF031A21+           GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
JMFN036P08+           GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
JMFF001C01+                            TCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
JMSF036O17+           GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
rJMSF001K13-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
JMSF020A19+                                          CAACCCAATANNGAGCCCTCCNTCATAGG
rJMSF012L07-          GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
                      ____________________________________________________________
consensus             GAAAACGGGCCAATTCTTCTGAGCTTCATTCCAACCCAATAGTGAGCCCTCCCTCATAGG
 
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rJMFF001C01-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
rJMSF031A21-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
rJMSF020A19-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
rJMSF036O17-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
JMSF031A21+           GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
JMFN036P08+           GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
JMFF001C01+           GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
JMSF036O17+           GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
rJMSF001K13-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
JMSF020A19+           NTCCCAANNGGAGGACACTATNCCATAGNTGACACNTAAGAGGGCAGTGCCGAAGAAGAT
JMSF012L07+                                CCCATAGCTGACACCTAAGAGGCCAGTGCCGAAGAAGAT
rJMSF012L07-          GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
                      ____________________________________________________________
consensus             GTCCCAACTGGAGGACACTATCCCATAGCTGACACCTAAGAGGGCAGTGCCGAAGAAGAT
 
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rJMFF001C01-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
rJMSF031A21-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
rJMSF020A19-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
rJMSF036O17-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMSF031A21+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMFN036P08+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMFF001C01+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMSF036O17+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
rJMSF001K13-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMSF020A19+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
JMSF012L07+           AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
rJMSF012L07-          AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
                      ____________________________________________________________
consensus             AAACGAGACGATGAAGGGTATCCAAGTGGGCACATCGATCTTTAGCCCAACTTTGAGGTA
 
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rJMFF001C01-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
rJMSF031A21-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
rJMSF020A19-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
rJMSF036O17-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMSF031A21+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMFN036P08+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMFF001C01+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMSF036O17+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
rJMSF001K13-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMSF020A19+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
JMSF012L07+           GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
rJMSF012L07-          GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
                      ____________________________________________________________
consensus             GTAAAAGAATGGGAAGAACAACAGCCCTATGAATAGAGGGATGCCCACTGATAAACCCAT
 
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rJMFF001C01-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
rJMSF031A21-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
rJMSF020A19-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
rJMSF036O17-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMSF031A21+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMFN036P08+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMFF001C01+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMSF036O17+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
rJMSF001K13-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMSF020A19+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMSF012L07+           TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
rJMSF012L07-          TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
JMSF001K13+                                                      TCCTCTTCATCTTCCTC
                      ____________________________________________________________
consensus             TCTGCTCATCATCCTATTCGTCACAATCTCCGGAATCACCCCTTCCTCTTCATCTTCCTC
 
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rJMFF001C01-          CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
rJMSF031A21-          CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
rJMSF020A19-          CACCTCTTCTTCCTTGTCTTCAACATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
rJMSF036O17-          CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMSF031A21+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMFN036P08+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMFF001C01+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMSF036O17+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
rJMSF001K13-          CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMSF020A19+           CACCTCTTCTTCCTTGTCTTCAACATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMSF012L07+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
rJMSF012L07-          CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
JMSF001K13+           CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
                      ____________________________________________________________
consensus             CACCTCTTCTTCCTTGTCTTCATCATCGTCCTCGAAGGAGCCTTTTCTAGGCTTCTTTTT
 
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rJMFF001C01-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
rJMSF031A21-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
rJMSF020A19-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
rJMSF036O17-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMSF031A21+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMFN036P08+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMFF001C01+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMSF036O17+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
rJMSF001K13-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMSF020A19+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMSF012L07+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
rJMSF012L07-          GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
JMSF001K13+           GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
                      ____________________________________________________________
consensus             GGACCTTTTGGGTTTCTTTTGGGAGGTGCCATAGCCGAAGCCTCTTGGAGTTGCTGAAAG
 
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rJMFF001C01-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGT                         
rJMSF031A21-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTG      
rJMSF020A19-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
rJMSF036O17-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMSF031A21+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMFN036P08+           GCCCACAGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMFF001C01+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMSF036O17+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
rJMSF001K13-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMSF020A19+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMSF012L07+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
rJMSF012L07-          GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
JMSF001K13+           GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
                      ____________________________________________________________
consensus             GGTGA-AGTGGGATAAGGAAGTTGATGATTGATGTGGCTTTGATTTTGGGAGTGAAAATG
 
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rJMSF020A19-          GAAGGAAATGTTTGGTTGGGATTGATGAA                               
rJMSF036O17-          GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAGNTGGTGAGGTTCTAGGA
JMSF031A21+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMFN036P08+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMFF001C01+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMSF036O17+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
rJMSF001K13-          GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMSF020A19+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMSF012L07+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
rJMSF012L07-          GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
JMSF001K13+           GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
                      ____________________________________________________________
consensus             GAAGGAAATGTTTGGTTGGGATTGATGAAATTAGGGGCGGTAG-TGGTGAGGTTCTAGGA
 
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rJMSF036O17-          ATTGAACAAGCTTCCATTGGGTTTGCTCCC                              
JMSF031A21+           ATTGAACAAGCTTCCATTGGGTTTGCTCCCCT                            
JMFN036P08+           ATTGAA                                                      
JMFF001C01+           ATT                                                         
JMSF036O17+           ATTGAACAAGCTTCCATTGGGTTTGCTCCCCT                            
rJMSF001K13-          ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTT                   
JMSF020A19+           ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTTAAGCATTTTGAGATGC   
JMSF012L07+           ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTTAAGCATTTTGAGATGC   
rJMSF012L07-          ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTTAAGCATTTTGAGATGC   
JMSF001K13+           ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTTAAGCATTTTGAGATGCCTC
                      ____________________________________________________________
consensus             ATTGAACAAGCTTCCATTGGGTTTGCTCCCCTAGTTGGTTTAAGCATTTTGAGATGCCTC