Contig 000542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010K18Sequence521000542 (9)ref|XP_009788736.1|6e-82PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]
JMFF031B05Sequence551000542 (9)ref|XP_009788736.1|9e-82PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]732011230 (4)sp|Q03682.1|BIP2_TOBAC6e-78RecName: Full=Luminal-binding protein 2; Short=BiP 2; AltName: Full=78 kDa gluc
JMFF044D03Sequence582000542 (9)ref|XP_009788736.1|1e-81PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]561014913gb|AEX55239.1|9e-17catalytic/ oxidoreductase [Allium sativum]
JMFN039O03Sequence608000542 (9)ref|XP_009788736.1|5e-99PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]
JMFS055G09Sequence624000542 (9)ref|XP_009788736.1|2e-103PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]
JMFS137A06Sequence592000542 (9)ref|XP_009788736.1|6e-96PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]
JMSF001G17Sequence367000542 (9)ref|XP_009788736.1|4e-39PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]229011230 (4)gb|KHG03675.1|2e-08Luminal-binding 5 [Gossypium arboreum] gb|KHG17377.1| Luminal-binding 5 [Gossypi
JMSF045G24Sequence781000542 (9)ref|XP_009788736.1|2e-137PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]695011230 (4)sp|Q03683.1|BIP3_TOBAC3e-66RecName: Full=Luminal-binding protein 3; Short=BiP 3; AltName: Full=78 kDa gluc
JMSF049O02Sequence684000542 (9)ref|XP_009788736.1|2e-126PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris]757011230 (4)sp|Q03686.1|BIP8_TOBAC1e-92RecName: Full=Luminal-binding protein 8; Short=BiP 8; AltName: Full=78 kDa gluc

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045G24+ T
                      ____________________________________________________________
consensus T
 
. : . : . : . : . : . :
JMSF049O02+ CCACATTCAATCCAGCA
JMSF045G24+ CCATAGGCAATGGCAGCTGCAGTTGGTTCATTGATAATCCTGGCCACATTCAATCCAGCA
                      ____________________________________________________________
consensus CCATAGGCAATGGCAGCTGCAGTTGGTTCATTGATAATCCTGGCCACATTCAATCCAGCA
 
. : . : . : . : . : . :
JMSF049O02+ ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
JMSF045G24+ ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
                      ____________________________________________________________
consensus ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
 
. : . : . : . : . : . :
JMSF049O02+ ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
JMFN039O03+ TTCAGCTGTTTCCTTCATCTTAGTA
JMFS137A06+ TCATCTTAGTA
JMFS055G09+ TCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
JMSF045G24+ ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
                      ____________________________________________________________
consensus ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
 
. : . : . : . : . : . :
JMSF049O02+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFN039O03+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFS137A06+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFS055G09+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFF010K18+ CTTTGATCTTG
JMFF031B05+ TCTTTGATCTTG
JMFF044D03+ TGGTTTCACCATCTTGATTCTTG
JMSF045G24+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
                      ____________________________________________________________
consensus AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
 
. : . : . : . : . : . :
JMSF049O02+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFN039O03+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFS137A06+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFS055G09+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF010K18+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF031B05+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF044D03+ ACTNGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMSF045G24+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
                      ____________________________________________________________
consensus ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
 
. : . : . : . : . : . :
JMSF049O02+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFN039O03+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTGTCATCAAAAATGGTC
JMFS137A06+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFS055G09+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF010K18+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF031B05+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF044D03+ CTTTGTACTTCTTNGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMSF045G24+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
                      ____________________________________________________________
consensus CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
 
. : . : . : . : . : . :
JMSF049O02+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFN039O03+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFS137A06+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFS055G09+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF010K18+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF031B05+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF044D03+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMSF045G24+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMSF001G17+ ATTGTCA
                      ____________________________________________________________
consensus CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
 
. : . : . : . : . : . :
JMSF049O02+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFN039O03+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFS137A06+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFS055G09+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF010K18+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF031B05+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF044D03+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMSF045G24+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMSF001G17+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
                      ____________________________________________________________
consensus GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
 
. : . : . : . : . : . :
JMSF049O02+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFN039O03+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFS137A06+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFS055G09+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF010K18+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF031B05+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF044D03+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMSF045G24+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMSF001G17+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
                      ____________________________________________________________
consensus CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
 
. : . : . : . : . : . :
JMSF049O02+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFN039O03+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFS137A06+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFS055G09+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF010K18+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF031B05+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF044D03+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMSF045G24+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMSF001G17+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
                      ____________________________________________________________
consensus GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
 
. : . : . : . : . : . :
JMSF049O02+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFN039O03+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFS137A06+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCAATTGCTCGA
JMFS055G09+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF010K18+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF031B05+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF044D03+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMSF045G24+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMSF001G17+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
                      ____________________________________________________________
consensus ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
 
. : . : . : . : . : . :
JMSF049O02+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFN039O03+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFS137A06+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFS055G09+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF010K18+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF031B05+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF044D03+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMSF045G24+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMSF001G17+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
                      ____________________________________________________________
consensus TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
 
. : . : . : . : . : . :
JMSF049O02+ TTTCCGT
JMFN039O03+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGA
JMFS137A06+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAA
JMFS055G09+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGA
JMFF010K18+ TTTCCGTGAATTTACAGAGATCAGAGACTC
JMFF031B05+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMFF044D03+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMSF045G24+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMSF001G17+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCAGTCC
                      ____________________________________________________________
consensus TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCAGTCC