| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010K18 | Sequence | 521 | 000542 (9) | ref|XP_009788736.1| | 6e-82 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | |||||
| JMFF031B05 | Sequence | 551 | 000542 (9) | ref|XP_009788736.1| | 9e-82 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | 732 | 011230 (4) | sp|Q03682.1|BIP2_TOBAC | 6e-78 | RecName: Full=Luminal-binding protein 2; Short=BiP 2; AltName: Full=78 kDa gluc |
| JMFF044D03 | Sequence | 582 | 000542 (9) | ref|XP_009788736.1| | 1e-81 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | 561 | 014913 | gb|AEX55239.1| | 9e-17 | catalytic/ oxidoreductase [Allium sativum] |
| JMFN039O03 | Sequence | 608 | 000542 (9) | ref|XP_009788736.1| | 5e-99 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | |||||
| JMFS055G09 | Sequence | 624 | 000542 (9) | ref|XP_009788736.1| | 2e-103 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | |||||
| JMFS137A06 | Sequence | 592 | 000542 (9) | ref|XP_009788736.1| | 6e-96 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | |||||
| JMSF001G17 | Sequence | 367 | 000542 (9) | ref|XP_009788736.1| | 4e-39 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | 229 | 011230 (4) | gb|KHG03675.1| | 2e-08 | Luminal-binding 5 [Gossypium arboreum] gb|KHG17377.1| Luminal-binding 5 [Gossypi |
| JMSF045G24 | Sequence | 781 | 000542 (9) | ref|XP_009788736.1| | 2e-137 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | 695 | 011230 (4) | sp|Q03683.1|BIP3_TOBAC | 3e-66 | RecName: Full=Luminal-binding protein 3; Short=BiP 3; AltName: Full=78 kDa gluc |
| JMSF049O02 | Sequence | 684 | 000542 (9) | ref|XP_009788736.1| | 2e-126 | PREDICTED: luminal-binding protein 4 [Nicotiana sylvestris] | 757 | 011230 (4) | sp|Q03686.1|BIP8_TOBAC | 1e-92 | RecName: Full=Luminal-binding protein 8; Short=BiP 8; AltName: Full=78 kDa gluc |
This contig is upended
. : . : . : . : . : . :
JMSF045G24+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
JMSF049O02+ CCACATTCAATCCAGCA
JMSF045G24+ CCATAGGCAATGGCAGCTGCAGTTGGTTCATTGATAATCCTGGCCACATTCAATCCAGCA
____________________________________________________________
consensus CCATAGGCAATGGCAGCTGCAGTTGGTTCATTGATAATCCTGGCCACATTCAATCCAGCA
. : . : . : . : . : . :
JMSF049O02+ ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
JMSF045G24+ ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
____________________________________________________________
consensus ATGATGCCTGCATCCTTAGTAGCCTGCCTCTGAGCATCATTGAAGTAAGCTGGAACAGTG
. : . : . : . : . : . :
JMSF049O02+ ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
JMFN039O03+ TTCAGCTGTTTCCTTCATCTTAGTA
JMFS137A06+ TCATCTTAGTA
JMFS055G09+ TCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
JMSF045G24+ ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
____________________________________________________________
consensus ACAACTGCATCCTTGATTGTCTTTCCAAGGAAAGCTTCAGCTGTTTCCTTCATCTTAGTA
. : . : . : . : . : . :
JMSF049O02+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFN039O03+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFS137A06+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFS055G09+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
JMFF010K18+ CTTTGATCTTG
JMFF031B05+ TCTTTGATCTTG
JMFF044D03+ TGGTTTCACCATCTTGATTCTTG
JMSF045G24+ AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
____________________________________________________________
consensus AGAATCATGGCACTAATCTCCTCAGGGCTGAAAACCTTGGTTTCACCATCTTTGATCTTG
. : . : . : . : . : . :
JMSF049O02+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFN039O03+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFS137A06+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFS055G09+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF010K18+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF031B05+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMFF044D03+ ACTNGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
JMSF045G24+ ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
____________________________________________________________
consensus ACTTGTATATATGGTTTTCCATCCTTGTTAACAATTTTGTAAGGAACAAGTTTCATGTCC
. : . : . : . : . : . :
JMSF049O02+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFN039O03+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTGTCATCAAAAATGGTC
JMFS137A06+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFS055G09+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF010K18+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF031B05+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMFF044D03+ CTTTGTACTTCTTNGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
JMSF045G24+ CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
____________________________________________________________
consensus CTTTGTACTTCTTTGTCGTCAAACTTTCTTCCAATGAGCCTTTTTACATCAAAAATGGTC
. : . : . : . : . : . :
JMSF049O02+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFN039O03+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFS137A06+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFS055G09+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF010K18+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF031B05+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMFF044D03+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMSF045G24+ CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
JMSF001G17+ ATTGTCA
____________________________________________________________
consensus CTCTCAGGGTTGGAAGCGGCTTGGTTCTTGGCAGCCTCACCAATTAATCTCTCATTGTCA
. : . : . : . : . : . :
JMSF049O02+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFN039O03+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFS137A06+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFS055G09+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF010K18+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF031B05+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMFF044D03+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMSF045G24+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
JMSF001G17+ GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
____________________________________________________________
consensus GTGAAGCCAACCCATGATGGTGTGATACGATTACCTTGGTCATTAGCTATGATCTCTACA
. : . : . : . : . : . :
JMSF049O02+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFN039O03+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFS137A06+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFS055G09+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF010K18+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF031B05+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMFF044D03+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMSF045G24+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
JMSF001G17+ CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
____________________________________________________________
consensus CGCTGATCTTTGTAAACTCCAACACATGAATAAGTTGTACCAAGATCTATTCCGATCACA
. : . : . : . : . : . :
JMSF049O02+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFN039O03+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFS137A06+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFS055G09+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF010K18+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF031B05+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMFF044D03+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMSF045G24+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
JMSF001G17+ GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
____________________________________________________________
consensus GTCCCTAATTTGGATGCTTCCTCTTTTGCGATAGAAAAGGCAAATAAGCTCCCGAACACA
. : . : . : . : . : . :
JMSF049O02+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFN039O03+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFS137A06+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCAATTGCTCGA
JMFS055G09+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF010K18+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF031B05+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMFF044D03+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMSF045G24+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
JMSF001G17+ ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
____________________________________________________________
consensus ACGATTCCGAAAACGATCAAGGACGTGCGCCTCGTCCACGCACCACCAGCCATTGCTCGA
. : . : . : . : . : . :
JMSF049O02+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFN039O03+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFS137A06+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFS055G09+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF010K18+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF031B05+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMFF044D03+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMSF045G24+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
JMSF001G17+ TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
____________________________________________________________
consensus TGATCAGATTGAGCTCTTGTTCTCGCTTTTCAGAAATGGTTTCCTTGTTCTATCTCTACT
. : . : . : . : . : . :
JMSF049O02+ TTTCCGT
JMFN039O03+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGA
JMFS137A06+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAA
JMFS055G09+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGA
JMFF010K18+ TTTCCGTGAATTTACAGAGATCAGAGACTC
JMFF031B05+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMFF044D03+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMSF045G24+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCA
JMSF001G17+ TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCAGTCC
____________________________________________________________
consensus TTTCCGTGAATTTACAGAGATCAGAGACTCAGTATAGCGAAGAGAAGCCGTAGTCAGTCC