clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF001E21 | Sequence | 324 | 000541 (4) | 798 | 004255 (5) | dbj|BAO96226.1| | 2e-106 | sugar-porter family protein 7, partial [Solanum lycopersicum] | |||
JMSF019P14 | Sequence | 498 | 000541 (4) | ref|XP_002270927.2| | 9e-33 | PREDICTED: sugar transporter ERD6-like 7 [Vitis vinifera] gb|ADP37173.1| putativ | 744 | 004255 (5) | dbj|BAO96226.1| | 3e-94 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
JMSF039N14 | Sequence | 677 | 000541 (4) | ref|XP_009614908.1| | 4e-76 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | 889 | 004255 (5) | dbj|BAO96226.1| | 7e-158 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
JMSF052L15 | Sequence | 613 | 000541 (4) | ref|XP_009614908.1| | 6e-70 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | 934 | 004255 (5) | dbj|BAO96226.1| | 3e-152 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF039N14+ AAGGCAACA
____________________________________________________________
consensus AAGGCAACA
. : . : . : . : . : . :
JMSF052L15+ TCTTT
JMSF039N14+ GATACTGCAGTGCATATCATAAGCTGATTTCAATGTTGTCAAAGATCCTCGTAAATCTTT
____________________________________________________________
consensus GATACTGCAGTGCATATCATAAGCTGATTTCAATGTTGTCAAAGATCCTCGTAAATCTTT
. : . : . : . : . : . :
JMSF052L15+ TGGCGCGATTTCAGCTATAAACACAGGTACCACATAAGAAAACACTCCCATTCCATATCC
JMSF039N14+ TGGCGCGATTTCAGCTATAAACACAGGTACCACATAAGAAAACACTCCCATTCCATATCC
____________________________________________________________
consensus TGGCGCGATTTCAGCTATAAACACAGGTACCACATAAGAAAACACTCCCATTCCATATCC
. : . : . : . : . : . :
JMSF052L15+ TGTTGCCAACCTTCCAATGTCCATAAGCACAGCCCCCTTAGCAAAATAAATGGCCAGCCA
JMSF039N14+ TGTTGCCAACCTTCCAATGTCCATAAGCACAGCCCCCTTAGCAAAATAAATGGCCAGCCA
____________________________________________________________
consensus TGTTGCCAACCTTCCAATGTCCATAAGCACAGCCCCCTTAGCAAAATAAATGGCCAGCCA
. : . : . : . : . : . :
JMSF052L15+ TCCTGCCACGCAGAAGGCGCCCGACATTCTCATTGCCCCTTTGCGACCAATGAAATCAGC
JMSF039N14+ TCCTGCCACGCAGAAGGCGCCCGACATTCTCATTGCCCCTTTGCGACCAATGAAATCAGC
JMSF019P14+ GCGACCAATGAAATCAGC
____________________________________________________________
consensus TCCTGCCACGCAGAAGGCGCCCGACATTCTCATTGCCCCTTTGCGACCAATGAAATCAGC
. : . : . : . : . : . :
JMSF052L15+ AATTGGTCCACTGGTTATTGCTCCAATCATAGCACCAAATGTCAAAATGGAGCCAAAGAG
JMSF039N14+ AATTGGTCCACTGGTTATTGCTCCAATCATAGCACCAAATGTCAAAATGGAGCCAAAGAG
JMSF019P14+ AATTGGTCCACTGGTTATTGCTCCAATCATAGCACCAAATGTCAAAATGGAGCCAAAGAG
____________________________________________________________
consensus AATTGGTCCACTGGTTATTGCTCCAATCATAGCACCAAATGTCAAAATGGAGCCAAAGAG
. : . : . : . : . : . :
JMSF052L15+ TGAGTACTGGGCTAGGGATAGGTTTAGATCTTCTCTGATGGCAGATTGTGTTGGTGATGA
JMSF039N14+ TGAGTACTGGGCTAGGGATAGGTTTAGATCTTCTCTGATGGCAGATTGTGTTGGTGATGA
JMSF019P14+ TGAGTACTGGGCTAGGGATAGGTTTAGATCTTCTCTGATGGCAGATTGTGTTGGTGATGA
____________________________________________________________
consensus TGAGTACTGGGCTAGGGATAGGTTTAGATCTTCTCTGATGGCAGATTGTGTTGGTGATGA
. : . : . : . : . : . :
JMSF052L15+ ATAGCCTGCACAAGATCCAAATGAATATGAACCACACACTGCAACAATTGTAGAAAAGTA
JMSF039N14+ ATAGCCTGCACAAGATCCAAATGAATATGAACCACACACTGCAACAATTGTAGAAAAGTA
JMSF019P14+ ATAGCCTGCACAAGATCCAAATGAATATGAACCACACACTGCAACAATTGTAGAAAAGTA
JMSF001E21+ CACTGCAACAATTGTAGAAAAGTA
____________________________________________________________
consensus ATAGCCTGCACAAGATCCAAATGAATATGAACCACACACTGCAACAATTGTAGAAAAGTA
. : . : . : . : . : . :
JMSF052L15+ AAGCAACCATCTTTCTTCCTTGCTTTCACCACCTCCATATCCTTCTTTTTTTGGAGTAAT
JMSF039N14+ AAGCAACCATCTTTCTTCCTTGCTTTCACCACCTCCATATCCTTCTTTTTTTGGAGTAAT
JMSF019P14+ AAGCAACCATCTTTCTTCCTTGCTTTCACCACCTCCATATCCTTCTTTTTTTGGAGTAAT
JMSF001E21+ AAGCAACCATCTTTCTTCCTTGCTTTCACCACCTCCATATCCTTCTTTTTTTGGAGTAAT
____________________________________________________________
consensus AAGCAACCATCTTTCTTCCTTGCTTTCACCACCTCCATATCCTTCTTTTTTTGGAGTAAT
. : . : . : . : . : . :
JMSF052L15+ GAGTGGGGCTATCATATCTGCTTCTGCCACACTGTTCTCACCTCTTTCAACATCATCTTG
JMSF039N14+ GAGTGGGGCTATCATATCTGCTTCTGCCACACTGTTCTCACCTCTTTCAACATCATCTTG
JMSF019P14+ GAGTGGGGCTATCATATCTGCTTCTGCCACACTGTTCTCACCTCTTTCAACATCATCTTG
JMSF001E21+ GAGTGGGGCTATCATATCTGCTTCTGCCACACTGTTCTCACCTCTTTCAACATCATCTTG
____________________________________________________________
consensus GAGTGGGGCTATCATATCTGCTTCTGCCACACTGTTCTCACCTCTTTCAACATCATCTTG
. : . : . : . : . : . :
JMSF052L15+ CTTAATATCCATGCCCTTAGATCAGAGTAACCACTACTACCCAGTCAGTGTACCAATAAG
JMSF039N14+ CTTAATATCCATGCCCTTAGATCAGAGTAACCACTACTACCCAGTCAGTGTACCAATAAG
JMSF019P14+ CTTAATATCCATGCCCTTAGATCAGAGTAACCACTACTACCCAGTCAGTGTACCAATAAG
JMSF001E21+ CTTAATATCCATGCCCTTAGATCAGAGTAACCACTACTACCCAGTCAGTGTACCAATAAG
____________________________________________________________
consensus CTTAATATCCATGCCCTTAGATCAGAGTAACCACTACTACCCAGTCAGTGTACCAATAAG
. : . : . : . : . : . :
JMSF052L15+ CTAAGGGGGAGTTTTAGCCTTTAGGTGCAGAGAGAAGGACAAAAAGGAAAAGAGTTCATA
JMSF039N14+ CTAAGGGGGAGTTTTAGCCTTTAGGTGCAGAGAGAAGGACAAAAAGGAAAAGAGTTCATA
JMSF019P14+ CTAAGGGGGAGTTTTAGCCTTTAGGTGCAGAGAGAAGGACAAAAAGGAAAAGAGTTCATA
JMSF001E21+ CTAAGGGGGAGTTTTAGCCTTTAGGTGCAGAGAGAAGGACAAAAAGGAAAAGAGTTCATA
____________________________________________________________
consensus CTAAGGGGGAGTTTTAGCCTTTAGGTGCAGAGAGAAGGACAAAAAGGAAAAGAGTTCATA
. : . : . : . : . : . :
JMSF052L15+ AAAAGAT
JMSF039N14+ AAAAGAT
JMSF019P14+ AAAAGATACTGATTTGCTGAGAAGTGTGGCATATATATTAAGATATTAGTGCTCAGACTC
JMSF001E21+ AAAAGATACTGATTTGCTGAGAAGTGTGGCATATATATTAAGATATTAGTGCTCAGACTC
____________________________________________________________
consensus AAAAGATACTGATTTGCTGAGAAGTGTGGCATATATATTAAGATATTAGTGCTCAGACTC