clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF013F16 | Sequence | 527 | 000538 (7) | emb|CDP07208.1| | 5e-110 | unnamed protein product [Coffea canephora] | 763 | 013658 (5) | ref|XP_002516768.1| | 4e-60 | rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor, |
JMSF001B20 | Sequence | 291 | 000538 (7) | ref|XP_011082187.1| | 9e-28 | PREDICTED: ABC transporter E family member 2 [Sesamum indicum] | 750 | 021346 | |||
JMSF004E05 | Sequence | 416 | 000538 (7) | ref|XP_009770922.1| | 1e-68 | PREDICTED: ABC transporter E family member 2 [Nicotiana sylvestris] ref|XP_00977 | 283 | 013658 (5) | |||
JMSF005F22 | Sequence | 347 | 000538 (7) | emb|CDP07208.1| | 2e-48 | unnamed protein product [Coffea canephora] | 456 | 013658 (5) | |||
JMSF021A05 | Sequence | 711 | 000538 (7) | ref|XP_008377063.1| | 4e-122 | PREDICTED: ABC transporter E family member 2-like [Malus domestica] ref|XP_00837 | 796 | 013658 (5) | ref|XP_002516768.1| | 2e-75 | rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor, |
JMSF027I02 | Sequence | 655 | 000538 (7) | emb|CDP07208.1| | 2e-131 | unnamed protein product [Coffea canephora] | 762 | 013658 (5) | ref|XP_002516768.1| | 9e-64 | rnase l inhibitor, putative [Ricinus communis] gb|EEF45666.1| rnase l inhibitor, |
JMSF046D18 | Sequence | 758 | 000538 (7) | emb|CDP07208.1| | 1e-148 | unnamed protein product [Coffea canephora] | 777 | 020521 | ref|XP_008374098.1| | 6e-87 | PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica] |
This contig is upended
. : . : . : . : . : . :
JMSF021A05+ ACAAA
JMSF046D18+ ACCAGATAAATCTCCCAACATTGTGGTCCAAAACCTGATTCAACTCGAGATCAACACAAA
____________________________________________________________
consensus ACCAGATAAATCTCCCAACATTGTGGTCCAAAACCTGATTCAACTCGAGATCAACACAAA
. : . : . : . : . : . :
JMSF021A05+ GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
JMSF027I02+ GATCAAGCACTTGCCCCACATTCCCTTGGA
JMSF046D18+ GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
____________________________________________________________
consensus GTTCTTCTTTCATATCTCTCTCGTCCTTTTGATCAAGCACTTGCCCCACATTCCCTTGGA
. : . : . : . : . : . :
JMSF021A05+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
JMFF013F16+ CTTCCA
JMSF027I02+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
JMSF046D18+ CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
____________________________________________________________
consensus CAGCCTTGGGAATATGGTCAACATACTGAGGCTTGATTATAGCTTTTAAATTATCTTCCA
. : . : . : . : . : . :
JMSF021A05+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMFF013F16+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMSF027I02+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
JMSF046D18+ GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
____________________________________________________________
consensus GAATACGAGTGAAGTAATTCTGCAATTCAGAACCTCTGAAGTAAGTCAATATCTCTTGCC
. : . : . : . : . : . :
JMSF021A05+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMFF013F16+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMSF027I02+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
JMSF046D18+ AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
____________________________________________________________
consensus AGTCGGGAGGGTTTTTGAAGCGTCCCAAATTAGGCTTTAGTTTCCCAGCTAATACTTTAA
. : . : . : . : . : . :
JMSF021A05+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMFF013F16+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMSF027I02+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
JMSF004E05+ CAGGCCAAGAACTTGTCCTGGTCTTG
JMSF046D18+ GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
____________________________________________________________
consensus GAGCAGTTGATTTTCCAATACCATTTGTTCCAACCAGGCCAAGAACTTGTCCTGGTCTTG
. : . : . : . : . : . :
JMSF021A05+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMFF013F16+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF005F22+ T
JMSF027I02+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF004E05+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
JMSF046D18+ GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
____________________________________________________________
consensus GGACTGGCAACCTATGTAATTTAAATGTGTTAGGACCATAACGATGTGTTGTATCCTTGT
. : . : . : . : . : . :
JMSF021A05+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMFF013F16+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF005F22+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF027I02+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF004E05+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
JMSF046D18+ CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
____________________________________________________________
consensus CCAAGTCCTTTGGCAGATTGATGATCTGAATGGCCTCAAATGGGCATTTCTTTACACAAA
. : . : . : . : . : . :
JMSF021A05+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMFF013F16+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF005F22+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF027I02+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF004E05+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF046D18+ TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
JMSF001B20+ CAATGCACAGCTCNTNTGAGATGAAGGCAATCTNGGCTGCAGGAGTCACCT
____________________________________________________________
consensus TACCACATCCAATGCACAGCTCCTCTGAGATGAAGGCAATCTTGGCTGCAGGAGTCACCT
. : . : . : . : . : . :
JMSF021A05+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAG-TCTTCTTGCATTCCTGACGGCACT
JMFF013F16+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF005F22+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF027I02+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF004E05+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF046D18+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
JMSF001B20+ CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
____________________________________________________________
consensus CAATACAAAGTTTGCCAGTTTTAACAACGGGGCAGCTCTTCTTGCATTCCTGACGGCACT
. : . : . : . : . : . :
JMSF021A05+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMFF013F16+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF005F22+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF027I02+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF004E05+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF046D18+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
JMSF001B20+ TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
____________________________________________________________
consensus TTTTTGGTTTGCACTTATCAGAGCTGACTATAGCAATACGAGTCAATCTCTGATCCGACA
. : . : . : . : . : . :
JMSF021A05+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMFF013F16+ TTTCTCTCTTCACCAATCTGT
JMSF005F22+ TTTCTCTCT
JMSF027I02+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF004E05+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF046D18+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
JMSF001B20+ TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
____________________________________________________________
consensus TTTCTCTCTTCACCAATCTGTAGCAGAGATTTCGATTGAAGAAGAGTAGATTGTGGAGCG
. : . : . : . : . : . :
JMSF021A05+ TGTGGTGGACGCAAGACAGGGAATGGAC
JMSF027I02+ TGTGGTGGACGCAAGACAGGGAA
JMSF004E05+ TGTGGTGGACGCAAGACAGGGAATGGAC
JMSF046D18+ TGTGGTGGACGCAAGACAGGGAATGGACTGT
JMSF001B20+ TGTGGTGGACGCAAGACAGGGAATGGACTGTGAATACGCCCAGCAAGCTAGGGTTACTTC
____________________________________________________________
consensus TGTGGTGGACGCAAGACAGGGAATGGACTGTGAATACGCCCAGCAAGCTAGGGTTACTTC