Contig 000537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007L18Sequence477000537 (2)emb|CDP11215.1|5e-34unnamed protein product [Coffea canephora]801007008 (2)ref|XP_009628617.1|195PREDICTED: uncharacterized protein LOC104118931 [Nicotiana tomentosiformis]
JMSF001A08Sequence225000537 (2)729007008 (2)gb|KDP38012.1|1e-37hypothetical protein JCGZ_04655 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF007L18+ ATCTTCTCACTTCATC
                      ____________________________________________________________
consensus ATCTTCTCACTTCATC
 
. : . : . : . : . : . :
JMFF007L18+ TTCCTCTTCCCACCCGAATATATCGCTGTAAAACCCCTGATCATACATCCGGCCACACTT
                      ____________________________________________________________
consensus TTCCTCTTCCCACCCGAATATATCGCTGTAAAACCCCTGATCATACATCCGGCCACACTT
 
. : . : . : . : . : . :
JMFF007L18+ CTCCATCGGGATCCTGAACTCCGGCAAGTTCCGGCCGCACCTCGACGGAATTACATTCTC
                      ____________________________________________________________
consensus CTCCATCGGGATCCTGAACTCCGGCAAGTTCCGGCCGCACCTCGACGGAATTACATTCTC
 
. : . : . : . : . : . :
JMFF007L18+ CGGCGGGGTGAAAATCTCCTCGTAGAACAGAGTCTTCCGGTACTCATTGCCGGAAAACTG
                      ____________________________________________________________
consensus CGGCGGGGTGAAAATCTCCTCGTAGAACAGAGTCTTCCGGTACTCATTGCCGGAAAACTG
 
. : . : . : . : . : . :
JMFF007L18+ GCGACGCATCACACTCCTCGGAGGCCCTCCGAAGACGTCGCTGAAGTCCTCGGGGTCTAA
                      ____________________________________________________________
consensus GCGACGCATCACACTCCTCGGAGGCCCTCCGAAGACGTCGCTGAAGTCCTCGGGGTCTAA
 
. : . : . : . : . : . :
JMFF007L18+ AACTGAAGATTCGGAGTCTCCGAGCACCGTTCTCCGGCGGTGGGAGTTGTCCTCCGTCGA
JMSF001A08+ GTCTCCGAGCACCGTTCTCCGGCGGTGGGAGTTGTCCTCCGTCGA
                      ____________________________________________________________
consensus AACTGAAGATTCGGAGTCTCCGAGCACCGTTCTCCGGCGGTGGGAGTTGTCCTCCGTCGA
 
. : . : . : . : . : . :
JMFF007L18+ TCTCCGGCGAGGGAGGCTAGTCTTTGTTGTTGTCGTCGTCGTGGTCGAAGGCATTTCCAT
JMSF001A08+ TCTCCGGCGAGGGAGGCTAGTCTTTGTTGTTGTCGTCGTCGTGGTCGAAGGCATTTCCAT
                      ____________________________________________________________
consensus TCTCCGGCGAGGGAGGCTAGTCTTTGTTGTTGTCGTCGTCGTGGTCGAAGGCATTTCCAT
 
. : . : . : . : . : . :
JMFF007L18+ TCCCATTCTCATCCTCCAGGACTCGTCCATCTTTCCGGCCAGGTTGTCGCCGGAGTACTG
JMSF001A08+ TCCCATTCTCATCCTCCAGGACTCGTCCATCTTTCCGGCCAGGTTGTCGCCGGAGTACTG
                      ____________________________________________________________
consensus TCCCATTCTCATCCTCCAGGACTCGTCCATCTTTCCGGCCAGGTTGTCGCCGGAGTACTG
 
. : . : . : . : . : . :
JMFF007L18+ TGTCCACAAGACCACAACCGCTGAACTTAAGAAGAAAGTAT
JMSF001A08+ TGTCCACAAGACCACAACCGCTGAACTTAAGAAGAAAGTATGGAGCAGCACTGCTTCTGC
                      ____________________________________________________________
consensus TGTCCACAAGACCACAACCGCTGAACTTAAGAAGAAAGTATGGAGCAGCACTGCTTCTGC