Contig 000531:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS067C03+                                                               TGTTTTCA
JMFS093E01+                                                               TGTTTTCA
JMFS028G08+                                              TCATCATCAACATTAGTTGTTTTCA
JMFS134D02+                                                               TGTTTTCA
                      ____________________________________________________________
consensus                                                TCATCATCAACATTAGTTGTTTTCA
 
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JMFS067C03+           CCTCCTCCATAATGGGTAATTCCTCGCCCTTAGGCGGCTTCGCTTCNCCGCCCTCTTCAA
JMFS093E01+           CCTCCTCCATAATGGGTAATTCCTCGCCCTTAGGCGGCTTCGCTTCCCCGCCCTCTTCAA
JMFS028G08+           CCTCCTCCATAATGGGTAATTCCTCGCCCTTAGGCGGCTTCGCTTCNCCGCCCTCTTCAA
JMFS134D02+           CCTCCTCCATAATGGGTAATTCCTCGCCCTTAGGCGGCTTCGCTTCNCCGCCCTCTTCAA
                      ____________________________________________________________
consensus             CCTCCTCCATAATGGGTAATTCCTCGCCCTTAGGCGGCTTCGCTTCCCCGCCCTCTTCAA
 
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JMFS067C03+           CTACAGCAGCTAAATCCTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
JMFS093E01+           CTACAGCAGCTAAATCCTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
JMFS028G08+           CTACAGCAGCTAAATACTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
JMFS134D02+           CTACAGCAGCTAAATCCTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
JMFS160H12+                        ATCCTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
                      ____________________________________________________________
consensus             CTACAGCAGCTAAATCCTCACCTTGAGGCTTCCCTTCACCATCCTCGGCTTTTTCCACTT
 
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JMFS067C03+           GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
JMFS093E01+           GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
JMFS028G08+           GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
JMFS134D02+           GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
JMFS019D09+                                                                      T
JMFS160H12+           GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
                      ____________________________________________________________
consensus             GTTCGACGACACAAGGCAATTCCTCACCTTTAGGCTTCTCGTCCTCAATGCCACTCTTCT
 
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JMFS067C03+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
JMFS093E01+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
JMFS028G08+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
JMFS134D02+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
JMFS019D09+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
JMFS160H12+           CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
                      ____________________________________________________________
consensus             CCACTTCAATTACCTCACCTTTAGGCGGCTTCTTCTCTTCCTCAATGCCACTACTCTTCT
 
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JMFS067C03+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
JMFS093E01+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
JMFS028G08+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
JMFS134D02+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
JMFS019D09+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
JMFS160H12+           CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
                      ____________________________________________________________
consensus             CCACTTCAATTACCTCACCTTTTGGATTCTCTTCCTCGCCCTCACCCTCGGGTTTCACCT
 
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JMFS067C03+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
JMFS093E01+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
JMFS028G08+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
JMFS134D02+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
JMFS019D09+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
JMFS160H12+           CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
                      ____________________________________________________________
consensus             CTTCCTCCCCCGCCTTCTTCTCATCTTCCACCACCACCTCACTAGTTGGAGGAGGAGGAG
 
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JMFS067C03+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
JMFS093E01+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
JMFS028G08+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
JMFS134D02+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
JMFS019D09+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
JMFS160H12+           GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
                      ____________________________________________________________
consensus             GAGCTTCACCATTTTTCTCTACTTCCTCGCCTTTCACCGCCTCCTCCCCGCTTTCCTTAA
 
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JMFS067C03+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
JMFS093E01+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
JMFS028G08+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
JMFS134D02+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
JMFS019D09+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
JMFS160H12+           GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
                      ____________________________________________________________
consensus             GTTGATGAGGCGCAGCGACGTTGTCTTGTTCCATTGTTTTAACTTCCTTCTCTGCCTCAG
 
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JMFS067C03+           AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
JMFS093E01+           AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
JMFS028G08+           AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
JMFS134D02+           AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
JMFS019D09+           AGGGATGAACAGAAGGAACT                                        
JMFS160H12+           AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
                      ____________________________________________________________
consensus             AGGGATGAACAGAAGGAACTGTAGATTCATCAGTAGCCATGGATGATGGGTATGATTGAA
 
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JMFS067C03+           TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTT          
JMFS093E01+           TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTTGCTACTATA 
JMFS028G08+           TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTTGCTACTATA 
JMFS134D02+           TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTTGCTACTATA 
JMFS160H12+           TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTTGCTACTATAC
                      ____________________________________________________________
consensus             TCAAAGAAAAAACATAAAAAAGGATCGGAGGTGAGAATGATGATCTTCTTGCTACTATAC
 
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JMFS160H12+           AGAGATCCACTACTCAACAGGTTTTGAATGAAAAGAAAGGTGTATTTGTATAGTATGGTA
                      ____________________________________________________________
consensus             AGAGATCCACTACTCAACAGGTTTTGAATGAAAAGAAAGGTGTATTTGTATAGTATGGTA