Contig 000525:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS158A07Sequence549000525 (2)
JMSF050B08Sequence699000525 (2)773005346 (3)ref|XP_010097154.1|4e-20Ribonuclease 3-like protein 1 [Morus notabilis] gb|EXB67221.1| Ribonuclease 3-li

Alignment

This contig is upended


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JMSF050B08+                              ATCACGTATATACAGTAGTAGTTCTGGTTACTACCCCCCAA
                      ____________________________________________________________
consensus                                ATCACGTATATACAGTAGTAGTTCTGGTTACTACCCCCCAA
 
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JMSF050B08+           AAATTCTCATTTTGTATTAATGGCCGGGATTATTTGTTGGGTAATATGGTTGAAAATTCC
                      ____________________________________________________________
consensus             AAATTCTCATTTTGTATTAATGGCCGGGATTATTTGTTGGGTAATATGGTTGAAAATTCC
 
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JMSF050B08+           CGAAAATAATAATAATCCTACGGAAAGATTAATATTATATGGGAAAAACAGAAAATTGGG
                      ____________________________________________________________
consensus             CGAAAATAATAATAATCCTACGGAAAGATTAATATTATATGGGAAAAACAGAAAATTGGG
 
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JMSF050B08+           AAGGAAAGGGTTGAGTGTTTGGGTATAGGTTTAGCACGAGTTCGAACACAAGGTTCTTTT
                      ____________________________________________________________
consensus             AAGGAAAGGGTTGAGTGTTTGGGTATAGGTTTAGCACGAGTTCGAACACAAGGTTCTTTT
 
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JMSF050B08+           CCTTAAAACCTTATTTGCTACCTCCCACAAGTGCTAGGAGCGTTGTAGCCTAGGTTTCCC
                      ____________________________________________________________
consensus             CCTTAAAACCTTATTTGCTACCTCCCACAAGTGCTAGGAGCGTTGTAGCCTAGGTTTCCC
 
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JMSF050B08+           AGGATAAAACGTGCTACGATTCCTTGTTTAAGCACTTAAACAAGGAACCCGGCAAACAAA
                      ____________________________________________________________
consensus             AGGATAAAACGTGCTACGATTCCTTGTTTAAGCACTTAAACAAGGAACCCGGCAAACAAA
 
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JMSF050B08+           GCAAAGTAGAGAACACTAGTTGGTAAAGAAGAGAGTAGAAGTAGAGTTTTGGGAAGCTGA
                      ____________________________________________________________
consensus             GCAAAGTAGAGAACACTAGTTGGTAAAGAAGAGAGTAGAAGTAGAGTTTTGGGAAGCTGA
 
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JMSF050B08+           AAGCTACTGGAATTCCTTTCGTTTTTGTACTGTGTAAAATGCTACTGCTTCTACCTCTCT
JMFS158A07+                                                            TCTACCTCTCT
                      ____________________________________________________________
consensus             AAGCTACTGGAATTCCTTTCGTTTTTGTACTGTGTAAAATGCTACTGCTTCTACCTCTCT
 
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JMSF050B08+           TTATATAGGGATGTTGGAGTGATAGCATTCAACATGGCCATTAAATTGGTGTTAAAATCA
JMFS158A07+           TTATATAGGGATGTTGGAGTGATAGCATTCAACATGGCCATTAAATTGGTGTTAAAACCA
                      ____________________________________________________________
consensus             TTATATAGGGATGTTGGAGTGATAGCATTCAACATGGCCATTAAATTGGTGTTAAAATCA
 
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JMSF050B08+           ATTATGTAACACCTGTAACGGTCAC                                   
JMFS158A07+           ATTGTGTAACACCTGTAACGGTCACGAGAGTACACCTCTCGTGCTATGGTGCAATACGAG
                      ____________________________________________________________
consensus             ATTGTGTAACACCTGTAACGGTCACGAGAGTACACCTCTCGTGCTATGGTGCAATACGAG
 
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JMFS158A07+           AGTACACCTCTCGTGTTTTGCTCTCGGTGCACCACAACCTCTCGTGCTCTCTGTAGCACG
                      ____________________________________________________________
consensus             AGTACACCTCTCGTGTTTTGCTCTCGGTGCACCACAACCTCTCGTGCTCTCTGTAGCACG
 
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JMFS158A07+           AGAGTGGTGTTCTCGGTTTTGGTCGAGCCATGCACCACAACCTCAGGAGCTCGCACCACA
                      ____________________________________________________________
consensus             AGAGTGGTGTTCTCGGTTTTGGTCGAGCCATGCACCACAACCTCAGGAGCTCGCACCACA
 
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JMFS158A07+           ACAGATGAAAAATGATACCGAAGTTAGGCATAACTTAGCCCGGAAGGCCAGCCCATTTCC
                      ____________________________________________________________
consensus             ACAGATGAAAAATGATACCGAAGTTAGGCATAACTTAGCCCGGAAGGCCAGCCCATTTCC
 
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JMFS158A07+           GGACGACATTCGTCGTCGCAGGTGCCGGCGCACGCGAGCTCGGGCTTGATTTTGATGTCT
                      ____________________________________________________________
consensus             GGACGACATTCGTCGTCGCAGGTGCCGGCGCACGCGAGCTCGGGCTTGATTTTGATGTCT