| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045J07 | Sequence | 626 | 000523 (6) | ref|XP_009772211.1| | 4e-51 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | 577 | 005526 (5) | ref|XP_009607019.1| | 2e-22 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana tom |
| JMFF047M19 | Sequence | 528 | 000523 (6) | emb|CDP07694.1| | 1e-38 | unnamed protein product [Coffea canephora] | |||||
| JMFS153G11 | Sequence | 614 | 000523 (6) | emb|CDP07694.1| | 3e-52 | unnamed protein product [Coffea canephora] | |||||
| JMSF009P03 | Sequence | 274 | 000523 (6) | 743 | 005526 (5) | ref|XP_009772211.1| | 5e-53 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | |||
| JMSF014O07 | Sequence | 387 | 000523 (6) | emb|CDP07694.1| | 2e-10 | unnamed protein product [Coffea canephora] | 779 | 005526 (5) | ref|XP_009772211.1| | 3e-67 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl |
| JMSF035M22 | Sequence | 591 | 000523 (6) | ref|XP_009772211.1| | 9e-64 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl | 682 | 005526 (5) | ref|XP_009772211.1| | 2e-34 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Nicotiana syl |
This contig is upended
. : . : . : . : . : . :
JMFF045J07+ TCAGGATCTGTTTTCTTCAAAATAACCGGATCCTGCCCTCCAGTACA
JMSF035M22+ CTCCAGTACA
____________________________________________________________
consensus TCAGGATCTGTTTTCTTCAAAATAACCGGATCCTGCCCTCCAGTACA
. : . : . : . : . : . :
JMFF045J07+ CTAACCAGAGATTTCTCACAGTATTCCATGCAAATTAGAGCTTCCTTAGTGCGTCCCATA
JMSF035M22+ CTAACCAGAGATTTCTCACAGTATTCCATGCAAATTAGAGCTTCCTTAGTGCGTCCCATA
JMFS153G11+ TAGTGCGTCCCATA
____________________________________________________________
consensus CTAACCAGAGATTTCTCACAGTATTCCATGCAAATTAGAGCTTCCTTAGTGCGTCCCATA
. : . : . : . : . : . :
JMFF045J07+ TCGAAGATAGAATGGGCACAAAGTGTAACAATATTAGGATGCCCCTTAAGTGATTTCATG
JMSF035M22+ TCGAAGATAGAATGGGCACAAAGTGTAACAATATTAGGATGCCCCTTAAGTGATTTCATG
JMFF047M19+ AGTGATTTCATG
JMFS153G11+ TCGAAGATAGAATGGGCACANAGTGTAACAATATTAGGATGCCCCTTAAGTGATTTCATG
____________________________________________________________
consensus TCGAAGATAGAATGGGCACAAAGTGTAACAATATTAGGATGCCCCTTAAGTGATTTCATG
. : . : . : . : . : . :
JMFF045J07+ ACGTTGATCTCTTTCAACACTAGGTCCATAGATTCTTCATCATTACATATGATGTGCTTC
JMSF035M22+ ACGTTGATCTCTTTCAACACTAGGTCCATAGATTCTTCATCATTACATATGATGTGCTTC
JMFF047M19+ ACGTTCATCTCTTCANNCACTAGGTCCATAGATTCTTCATCATTACATATGATGTGCTTC
JMFS153G11+ ACGTTGATCTCTTTCAACACTAGGTCCATAGATTCTTCATCATTACATATGATGTGCTTC
____________________________________________________________
consensus ACGTTGATCTCTTTCAACACTAGGTCCATAGATTCTTCATCATTACATATGATGTGCTTC
. : . : . : . : . : . :
JMFF045J07+ AACGCATATTGTTTTGAGCCATGGATTACATCTCGGCCCAGATAAACACAAGAGAATCCG
JMSF035M22+ AACGCATATTGTTTTGAGCCATGGATTACATCTCGGCCCAGATAAACACAAGAGAATCCG
JMFF047M19+ AACGCATATTGTTTTGAGCCATGGATTACATCTCGGCCCAGATAAACACAAGAGAATCCG
JMFS153G11+ AACGCATATTGTTTTGAGCCATGGATTACATCTCGGCCCAGATAAACACAAGAGAATCCG
____________________________________________________________
consensus AACGCATATTGTTTTGAGCCATGGATTACATCTCGGCCCAGATAAACACAAGAGAATCCG
. : . : . : . : . : . :
JMFF045J07+ CCTTCTGCTATTATGTTGCGAACTTGAAC-TTGAGATTGCCAATATCAATGGTGCGGCCT
JMSF035M22+ CCTTCTGCTATTATGTTGCGAACTTGAACTTTGAGATTGCCAATATCAATGGTGCGGCCT
JMFF047M19+ CCTTCTGCTATTATGTTGCGAACTTGAACTTTGAGATTGCCAATATCAATGGTGCGGCCT
JMSF014O07+ TGCTATTATGTTGCGAACTTGAACTTTGAGATTGCCAATATCAATGGTGCGGCCT
JMFS153G11+ CCTTCTGCTATTATGTTGCGAACTTGAACTTTGAGATTGCCAATATCAATGGTGCGGCCT
____________________________________________________________
consensus CCTTCTGCTATTATGTTGCGAACTTGAACTTTGAGATTGCCAATATCAATGGTGCGGCCT
. : . : . : . : . : . :
JMFF045J07+ TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
JMSF035M22+ TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
JMFF047M19+ TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
JMSF014O07+ TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
JMSF009P03+ CAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
JMFS153G11+ TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
____________________________________________________________
consensus TCAAGCCCAGTCTGTTCCTTAGCCGTGAAAGGCTTGAACCTCCACATGATTTGTAGTTCT
. : . : . : . : . : . :
JMFF045J07+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
JMSF035M22+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTCGATTGAATCAATAAA
JMFF047M19+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
JMSF014O07+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
JMSF009P03+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
JMFS153G11+ GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
____________________________________________________________
consensus GAATAGACAATACACTTGTCAGTAAAACAGCCCCAACCCAAATTGGATTGAATCAATAAA
. : . : . : . : . : . :
JMFF045J07+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
JMSF035M22+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
JMFF047M19+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
JMSF014O07+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
JMSF009P03+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
JMFS153G11+ GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
____________________________________________________________
consensus GTGGCGGAAACGGACTAGGGAAGTCACAGAGATGCCATTGAAGCAGCTTCACTGATTCGC
. : . : . : . : . : . :
JMFF045J07+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
JMSF035M22+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
JMFF047M19+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
JMSF014O07+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
JMSF009P03+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
JMFS153G11+ AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
____________________________________________________________
consensus AGACAGTGGGTGGGAGATCTGAAAAAGCAGGCGTCAGATCGGGTAAAGTCGTAAAGATGG
. : . : . : . : . : . :
JMFF045J07+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGC
JMSF035M22+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGC
JMFF047M19+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGCAGAGGAGAGACAATGGCGAG
JMSF014O07+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGCAGAGGAGAGACAATGGCGAG
JMSF009P03+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGC
JMFS153G11+ CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGCAGAGGAGAGACAATGGCGAG
____________________________________________________________
consensus CAGCAATGTGAATCGTACAGGCCTTGGGGTTTGGACTCGCAGAGGAGAGACAATGGCGAG
. : . : . : . : . : . :
JMFF047M19+ ACGGAAGGTATTAAAGAAGATGATGAT
JMSF014O07+ ACGGAAGGTATTAAAGAAGATGATGAT
JMFS153G11+ ACGGAAGGTATTAAAGAAGATGATGATAGCTATGGCGTTTGGATGTTAACCTCTTAGACA
____________________________________________________________
consensus ACGGAAGGTATTAAAGAAGATGATGATAGCTATGGCGTTTGGATGTTAACCTCTTAGACA