Contig 000522:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS013A08Sequence618000522 (9)ref|XP_009621642.1|4e-54PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS124A05Sequence319000522 (9)emb|CAA71762.1|6e-14Ubiquitin activating enzyme E1 [Nicotiana tabacum]
JMFS124G05Sequence572000522 (9)ref|XP_009621642.1|4e-47PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS149E12Sequence501000522 (9)ref|XP_009621642.1|1e-47PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS152H04Sequence633000522 (9)ref|XP_009621642.1|2e-57PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS153D09Sequence610000522 (9)ref|XP_009621642.1|2e-53PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS155D02Sequence516000522 (9)dbj|BAD00984.1|7e-11ubiquitin activating enzyme 2 [Nicotiana tabacum]
JMFS159G03Sequence403000522 (9)ref|XP_009621642.1|6e-38PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana tomentosiformis]
JMFS165A04Sequence568000522 (9)ref|XP_009804780.1|7e-45PREDICTED: ubiquitin-activating enzyme E1 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS013A08+                                                     AGAATTGTTTAGTTCTGN
JMFS152H04+                                      GGTAGAAATAATCACAGAATTGTTTAGTTCTGN
JMFS153D09+                                                             TTAGTTCTTG
                      ____________________________________________________________
consensus                                        GGTAGAAATAATCACAGAATTGTTTAGTTCTGG
 
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JMFS013A08+           CAATTTCTGAACAGAAGCAAGAGCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
JMFS152H04+           CAATTTCTGAACAGAAGCAAGAGCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
JMFS124G05+                                 GCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
JMFS165A04+                                           TCCCCACATCATCCTCAGAGAAAACAAA
JMFS149E12+                               GAGCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
JMFS153D09+           CAATTTCTGAACAGAAGCAAGAGCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
                      ____________________________________________________________
consensus             CAATTTCTGAACAGAAGCAAGAGCCCTGTTTTTCCCCACATCATCCTCAGAGAAAACAAA
 
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JMFS013A08+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS152H04+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS124G05+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS165A04+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS149E12+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS159G03+                    CAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
JMFS153D09+           ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
                      ____________________________________________________________
consensus             ATTGCTAGACAGATCCCACAGCTCCACATTTCCTTCATCGTGTAAAGTAACAGATTTGAC
 
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JMFS013A08+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS152H04+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS124G05+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS165A04+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS149E12+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS159G03+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
JMFS153D09+           ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
                      ____________________________________________________________
consensus             ACCAGCAAGAATGAGGTTCTTCGCGATCTCAACTCCGAGGCCTTTCATTCCAGAGATAAG
 
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JMFS013A08+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS152H04+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS124G05+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS165A04+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS149E12+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS159G03+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS124A05+           AACATTAGAGCCGATCAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
JMFS155D02+                                                  ATACACAGCGAGCTGAGGAGT
JMFS153D09+           AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
                      ____________________________________________________________
consensus             AACATTAGAGCCGAACAACCGACGCATGGTCTCACGGCCATACACAGCGAGCTGACGGCT
 
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JMFS013A08+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS152H04+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS124G05+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS165A04+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS149E12+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS159G03+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGACCAGTCAATCGGCGATTTACCATT
JMFS124A05+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
JMFS155D02+           GTGCAGATCGTCATCGATGTTGGGAGGATTACACGAGCAGTCAGTCGGCGATTTGCCATT
JMFS153D09+           GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
                      ____________________________________________________________
consensus             GTGCAGATCCTCATCGATGTCGGGAGAATTACGCGAGCAGTCAATCGGCGATTTACCATT
 
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JMFS013A08+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS152H04+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS124G05+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS165A04+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS149E12+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS159G03+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS124A05+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
JMFS155D02+           GTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTGCAAGCCTTCCATGTC
JMFS153D09+           CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
                      ____________________________________________________________
consensus             CTCAGTCCGACGGCCGTTACTAACAGCATCATTTCCGTTCACCTCCACGCCTCCCATCTC
 
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JMFS013A08+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS152H04+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS124G05+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS165A04+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS149E12+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS159G03+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS124A05+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
JMFS155D02+           GACGCTGGATTCCTATGCGCGGCGGCCGATATAGCAGTCGGATTTAAGCCGTTTGTTCAG
JMFS153D09+           GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
                      ____________________________________________________________
consensus             GACACTCGATTCCTCTCCGCCGCCGCCGATATAGCAATCGGATTTGAGCCGTTTGTTCAG
 
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JMFS013A08+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAG
JMFS152H04+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
JMFS124G05+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
JMFS165A04+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
JMFS149E12+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
JMFS159G03+           GGAATAAGAACCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCC        
JMFS124A05+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
JMFS155D02+           GGAATAAGAAGCAGAGGAAGAAGAACGTTTTAGTTGTGAAG                   
JMFS153D09+           GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
                      ____________________________________________________________
consensus             GGAATAAGAAGCAGAGGAAGAAGAACCTTCTAGTTCTGAAGCGGCGGCGTCCCCTCCAAC
 
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JMFS013A08+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
JMFS152H04+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
JMFS124G05+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
JMFS165A04+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
JMFS149E12+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGA                   
JMFS124A05+           TGCTGACCTCTTCAACGGA                                         
JMFS153D09+           TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
                      ____________________________________________________________
consensus             TGCTGACCTCTTCAACGGAAGCATAAAGCGGTCTGAACTGATTGATTCATCAATAGCCAT
 
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JMFS013A08+           GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCACAGCAG
JMFS152H04+           GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCACAGCAG
JMFS124G05+           GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCA      
JMFS165A04+           GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCACAGCAG
JMFS153D09+           GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCACAGCAG
                      ____________________________________________________________
consensus             GTTAAAATCTTCAAATTATTATAAATTTATAAAAATAAAACTTGAGCAATTTCACAGCAG