Contig 000516:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008E04Sequence613000516 (2)ref|XP_006362055.1|1e-32PREDICTED: activating signal cointegrator 1 complex subunit 2 homolog [Solanum
JMFS146D07Sequence624000516 (2)ref|XP_006362055.1|5e-22PREDICTED: activating signal cointegrator 1 complex subunit 2 homolog [Solanum

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS008E04+ GTA
                      ____________________________________________________________
consensus GTA
 
. : . : . : . : . : . :
JMFS008E04+ TGGGAAATCATACCATCTACTCCGAAACTTAAGAAAGCTTTCAAGGAAAGAGTGAAGGGA
JMFS146D07+ GCTTTCAAGGAAAGAGTGAAGGGA
                      ____________________________________________________________
consensus TGGGAAATCATACCATCTACTCCGAAACTTAAGAAAGCTTTCAAGGAAAGAGTGAAGGGA
 
. : . : . : . : . : . :
JMFS008E04+ AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
JMFS146D07+ AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
                      ____________________________________________________________
consensus AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
 
. : . : . : . : . : . :
JMFS008E04+ CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
JMFS146D07+ CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
                      ____________________________________________________________
consensus CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
 
. : . : . : . : . : . :
JMFS008E04+ AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
JMFS146D07+ AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
                      ____________________________________________________________
consensus AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
 
. : . : . : . : . : . :
JMFS008E04+ GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
JMFS146D07+ GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
                      ____________________________________________________________
consensus GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
 
. : . : . : . : . : . :
JMFS008E04+ TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
JMFS146D07+ TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
                      ____________________________________________________________
consensus TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
 
. : . : . : . : . : . :
JMFS008E04+ AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
JMFS146D07+ AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
                      ____________________________________________________________
consensus AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
 
. : . : . : . : . : . :
JMFS008E04+ TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
JMFS146D07+ TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
                      ____________________________________________________________
consensus TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
 
. : . : . : . : . : . :
JMFS008E04+ CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
JMFS146D07+ CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
                      ____________________________________________________________
consensus CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
 
. : . : . : . : . : . :
JMFS008E04+ TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
JMFS146D07+ TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
                      ____________________________________________________________
consensus TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
 
. : . : . : . : . : . :
JMFS008E04+ TGTAAGCTGT
JMFS146D07+ TGTAAGCTGTAACGCACCTATGACCTACCTCCTTCTCTGAGGAATGAAACGATTAAACGA
                      ____________________________________________________________
consensus TGTAAGCTGTAACGCACCTATGACCTACCTCCTTCTCTGAGGAATGAAACGATTAAACGA