Contig 000516:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+                                                                    GTA
                      ____________________________________________________________
consensus                                                                      GTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           TGGGAAATCATACCATCTACTCCGAAACTTAAGAAAGCTTTCAAGGAAAGAGTGAAGGGA
JMFS146D07+                                               GCTTTCAAGGAAAGAGTGAAGGGA
                      ____________________________________________________________
consensus             TGGGAAATCATACCATCTACTCCGAAACTTAAGAAAGCTTTCAAGGAAAGAGTGAAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
JMFS146D07+           AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
                      ____________________________________________________________
consensus             AGTGTCGCTGGCCACTTCTCGCCAGAAATCTCTAGGGTTGAGTTTAAGTAACCGAGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
JMFS146D07+           CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
                      ____________________________________________________________
consensus             CTCTCTGTTCAAAAGATCCACCACTCGCTGCGATTCCACAGGATCCAATCCGCCCTCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
JMFS146D07+           AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
                      ____________________________________________________________
consensus             AGCTCCAAGCCCAGCCGCAACCGCCTCATCCTGAGGCAAGTAATTGACAAAATTGCCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
JMFS146D07+           GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
                      ____________________________________________________________
consensus             GTGGACACCACTGGAAACCCAGTCCCCATTCTCCGACATCCTAAGCCTGCTCGCTGATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
JMFS146D07+           TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
                      ____________________________________________________________
consensus             TCCTCCGCTGCCGCTACCACCGGCGGCGCCACCGGACTTCTTAGATTGTTGTTGCCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
JMFS146D07+           AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
                      ____________________________________________________________
consensus             AGAATTAGATAGAGTTTGATTGGTTTGGACATCTTTCTTCGGCACAAACTTCTGTTGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
JMFS146D07+           TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
                      ____________________________________________________________
consensus             TCTGCTGCTGCTGCTGCCGCCCCCTTGGTACCTGTTCTGGCTGCTGAATCGATTCGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
JMFS146D07+           CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
                      ____________________________________________________________
consensus             CATAATTATACGCAGCGTATATCGACTTATGTATGTATATATAAGTGTGTATCGATGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
JMFS146D07+           TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
                      ____________________________________________________________
consensus             TGATTCAGTAGCCGTTCGCCACTCCAGTTAGGGAGGTTGTGCGTCGCCGGGGGCCGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS008E04+           TGTAAGCTGT                                                  
JMFS146D07+           TGTAAGCTGTAACGCACCTATGACCTACCTCCTTCTCTGAGGAATGAAACGATTAAACGA
                      ____________________________________________________________
consensus             TGTAAGCTGTAACGCACCTATGACCTACCTCCTTCTCTGAGGAATGAAACGATTAAACGA