Contig 000510:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138G03Sequence615000510 (2)ref|XP_009629595.1|7e-19PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]
JMSF038N13Sequence340000510 (2)877012431 (6)ref|XP_006367734.1|8e-98PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS138G03+ TGGATGAGCTCGTTA
                      ____________________________________________________________
consensus TGGATGAGCTCGTTA
 
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JMFS138G03+ TTGAGATTGTCCACCAAAAGGATCCAGTAAGAGCAAGAACTACTATGGCAACTAAGCTAA
                      ____________________________________________________________
consensus TTGAGATTGTCCACCAAAAGGATCCAGTAAGAGCAAGAACTACTATGGCAACTAAGCTAA
 
. : . : . : . : . : . :
JMFS138G03+ GTTTGAGCAAAAGCAATGTGAACTTAATCTGACTTCGCCCAGCTCCAGGGCTGAAGGGAT
                      ____________________________________________________________
consensus GTTTGAGCAAAAGCAATGTGAACTTAATCTGACTTCGCCCAGCTCCAGGGCTGAAGGGAT
 
. : . : . : . : . : . :
JMFS138G03+ TAGATAGATAACCATTTTCACTAACACCATTCTTTGTAGGCGATTTGTCAGTGGAAAGAA
                      ____________________________________________________________
consensus TAGATAGATAACCATTTTCACTAACACCATTCTTTGTAGGCGATTTGTCAGTGGAAAGAA
 
. : . : . : . : . : . :
JMFS138G03+ TCCGTAAAAGAAATTTCATAGAGAGGAAACTCTGATCACCAGCTGATTGACTATGATCAA
                      ____________________________________________________________
consensus TCCGTAAAAGAAATTTCATAGAGAGGAAACTCTGATCACCAGCTGATTGACTATGATCAA
 
. : . : . : . : . : . :
JMFS138G03+ AATCTTCTTTCTCTATCTTATCTTTCATCTGAGAGTCATCCAAGAAGCTCTGACTGTTCC
                      ____________________________________________________________
consensus AATCTTCTTTCTCTATCTTATCTTTCATCTGAGAGTCATCCAAGAAGCTCTGACTGTTCC
 
. : . : . : . : . : . :
JMFS138G03+ CTGAGTGCCGGCCCCCACCTCCAACAGATAAACCTCTATGCAGTGGCCTAGCCATAATCC
                      ____________________________________________________________
consensus CTGAGTGCCGGCCCCCACCTCCAACAGATAAACCTCTATGCAGTGGCCTAGCCATAATCC
 
. : . : . : . : . : . :
JMSF038N13+ ACTCCAGAAATGTATAAACTCAAAGAATCACTCACT
JMFS138G03+ GCACTATCAATGGCCACAAAAATTACTCCAGAAATGTATAAACTCAAAGAATCACTCACT
                      ____________________________________________________________
consensus GCACTATCAATGGCCACAAAAATTACTCCAGAAATGTATAAACTCAAAGAATCACTCACT
 
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JMSF038N13+ CACTCNCTCGCCGTTCGGCTCAGTAAGTAAATAGTAGGNGAGTAAGTAAAAGAGTTGGTA
JMFS138G03+ CACTCACTCGCCGTTCGGCTCAGTAAGTAAATAGTAGGCGAGTAAGTAAAAGAGTTGGTA
                      ____________________________________________________________
consensus CACTCACTCGCCGTTCGGCTCAGTAAGTAAATAGTAGGCGAGTAAGTAAAAGAGTTGGTA
 
. : . : . : . : . : . :
JMSF038N13+ AGCAAAGCTCGCTGATTGTTGAATAACTCTCCTCTTCCCAGCTGCCACCCGTGAAACGCA
JMFS138G03+ AGCAAAGCTCGCTGATTGTTGAATAACTCTCCTCTTCCCAGCTGCCACCCGTGAAACGCA
                      ____________________________________________________________
consensus AGCAAAGCTCGCTGATTGTTGAATAACTCTCCTCTTCCCAGCTGCCACCCGTGAAACGCA
 
. : . : . : . : . : . :
JMSF038N13+ AACAAACCATCAATTTTCTCTCTCTCCCTCGTTTTTCCTCACTGCCTCTGCTT
JMFS138G03+ AACAAACCATCAATTTTCTCTCTCTCCCTCGTTTTTCCTCACTGCCTCTGCTTATCAAAT
                      ____________________________________________________________
consensus AACAAACCATCAATTTTCTCTCTCTCCCTCGTTTTTCCTCACTGCCTCTGCTTATCAAAT