| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS002C08 | Sequence | 537 | 000508 (9) | ref|XP_009803735.1| | 172 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMFS010G02 | Sequence | 635 | 000508 (9) | emb|CDP16327.1| | 2e-73 | unnamed protein product [Coffea canephora] | |||||
| JMFS038B09 | Sequence | 618 | 000508 (9) | ref|XP_009803735.1| | 219 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMFS065B02 | Sequence | 619 | 000508 (9) | ref|XP_009803735.1| | 221 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMFS068E08 | Sequence | 618 | 000508 (9) | ref|XP_009803735.1| | 249 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMFS110A02 | Sequence | 619 | 000508 (9) | ref|XP_009803735.1| | 251 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMFS136D11 | Sequence | 596 | 000508 (9) | ref|XP_009803735.1| | 201 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | |||||
| JMSF009O03 | Sequence | 292 | 000508 (9) | ref|XP_009624643.1| | 2e-10 | PREDICTED: 4-alpha-glucanotransferase DPE2 [Nicotiana tomentosiformis] ref|XP_00 | 745 | 007044 (3) | emb|CDP16326.1| | 8e-93 | unnamed protein product [Coffea canephora] |
| JMSF011L24 | Sequence | 310 | 000508 (9) | ref|XP_009803735.1| | 116 | PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00 | 747 | 007044 (3) | emb|CDP16326.1| | 2e-93 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFS068E08+ AGGAGCTTCCAATCA
JMFS110A02+ AAGGAGCTTCCAATCA
____________________________________________________________
consensus AAGGAGCTTCCAATCA
. : . : . : . : . : . :
JMFS068E08+ CATAAATTGATATCCCTTCATTTACGTTTGGGCAGCATATTNTGAATTGTACAATGATTG
JMFS110A02+ CATAAATTGATATCCCTTCATTTACGTTTGGGCAGCATATTTTGAATTGTACAATGATTG
JMFS010G02+ TCCCTTCATTTACGTTTGGGCAGCATATTTTGAATTGTACAATGATTG
JMFS065B02+ GAATTGTACAATGATTG
JMFS038B09+ AATGATTG
____________________________________________________________
consensus CATAAATTGATATCCCTTCATTTACGTTTGGGCAGCATATTTTGAATTGTACAATGATTG
. : . : . : . : . : . :
JMFS068E08+ AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
JMFS110A02+ AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
JMFS010G02+ AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
JMFS065B02+ AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
JMFS038B09+ AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
____________________________________________________________
consensus AATCTTCCTGGCCCGACTTAGTTTGGATGGGCACATGTGGTCTTTCAATGTCTAAACTCC
. : . : . : . : . : . :
JMFS068E08+ CACTTTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
JMFS110A02+ CACTTTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
JMFS010G02+ CACTTTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
JMFS065B02+ CACTTTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
JMFS038B09+ CACTTNTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
JMFS136D11+ TTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
____________________________________________________________
consensus CACTTTTACGAAAGATGACATCTTTAAATGCACTTCTAAAAGGAATACCGTCAGAACCAG
. : . : . : . : . : . :
JMFS068E08+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS110A02+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS010G02+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS065B02+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS038B09+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS002C08+ GCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
JMFS136D11+ TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
____________________________________________________________
consensus TCTGCCAAAGGTCACGAAGCTCTACTGAAAGACCTTCCTCGAGTCCTTCAGGCAGCACTA
. : . : . : . : . : . :
JMFS068E08+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS110A02+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS010G02+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS065B02+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS038B09+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS002C08+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
JMFS136D11+ GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
____________________________________________________________
consensus GTTTCCTCCTATTTCCACCTTCCCATCTCACAATATTCCTTTCATCATCGACCACGTAAT
. : . : . : . : . : . :
JMFS068E08+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS110A02+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMSF011L24+ TGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS010G02+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS065B02+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS038B09+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS002C08+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
JMFS136D11+ AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
____________________________________________________________
consensus AAGTGTACTCGCTTTTGAATCCAAGAGGAACAGGCACACTTCCAGACCAGATGAGCTCAT
. : . : . : . : . : . :
JMFS068E08+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMFS110A02+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMSF011L24+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMFS010G02+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMFS065B02+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMFS038B09+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMSF009O03+ CTTCACATTCCATGAACCGAGCATCG
JMFS002C08+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
JMFS136D11+ CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
____________________________________________________________
consensus CCCCCTGGTGAGAAGGTCTCAACAAAAGACCCTTCTTCACATTCCATGAACCGAGCATCG
. : . : . : . : . : . :
JMFS068E08+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS110A02+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMSF011L24+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS010G02+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS065B02+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS038B09+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMSF009O03+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS002C08+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
JMFS136D11+ CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
____________________________________________________________
consensus CCTCCGATCCACACACGATAAGGTGCTGCCCCCATTGAGTATAATATGGTATTCTGAAGC
. : . : . : . : . : . :
JMFS068E08+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS110A02+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMSF011L24+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS010G02+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS065B02+ ACACCTTCACTGACTTCAGAGGTTTTTTTCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS038B09+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMSF009O03+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS002C08+ ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
JMFS136D11+ ACACCTTCAATGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
____________________________________________________________
consensus ACACCTTCACTGACTTCAGAGGTTTTTTCCCACCTAATAATCCCAGGTTCGCCATCTCTT
. : . : . : . : . : . :
JMFS068E08+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS110A02+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMSF011L24+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS010G02+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS065B02+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS038B09+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMSF009O03+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS002C08+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
JMFS136D11+ GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
____________________________________________________________
consensus GCTACAATGGAGATTGCAATTTGGTTCAAGATTTCCCGGAAAAGGATTGGTTTTGATCCA
. : . : . : . : . : . :
JMFS068E08+ GGG
JMFS110A02+ GGG
JMSF011L24+ GGGAAAAAATAC
JMFS010G02+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTC
JMFS065B02+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
JMFS038B09+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
JMSF009O03+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
JMFS002C08+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
JMFS136D11+ GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
____________________________________________________________
consensus GGGAAAAAATACAAGAATGGCCGCGAAATATCAACAGTAGATATTTCTAGTATATTAGAC
. : . : . : . : . : . :
JMFS065B02+ AG
JMFS038B09+ AGAGGTTGGG
JMSF009O03+ AGAGGTTGGGCATGAATGCATTGAC
JMFS002C08+ AGAGGTTGGGCATGAATGCATTGACGGCCCGTAAGAGAGATCAGAAAAGTGGAGGAGAAA
JMFS136D11+ AGAGGTTGGGCATGAATGCATTGACGGCCCGTAAGAGAGATCAGAAAAGTGGAGGAGAAA
____________________________________________________________
consensus AGAGGTTGGGCATGAATGCATTGACGGCCCGTAAGAGAGATCAGAAAAGTGGAGGAGAAA