clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS055E04 | Sequence | 627 | 000502 (5) | emb|CDP05802.1| | 7e-100 | unnamed protein product [Coffea canephora] | |||||
JMFS063B09 | Sequence | 642 | 000502 (5) | ref|XP_004170506.1| | 270 | PREDICTED: uncharacterized protein LOC101226109 [Cucumis sativus] | |||||
JMFS131A05 | Sequence | 614 | 000502 (5) | ref|XP_009611150.1| | 238 | PREDICTED: uncharacterized protein LOC104104710 [Nicotiana tomentosiformis] | |||||
JMSF008E16 | Sequence | 310 | 000502 (5) | ref|XP_006452164.1| | 2e-30 | hypothetical protein CICLE_v100072722mg, partial [Citrus clementina] gb|ESR65404 | 765 | 000431 (3) | ref|XP_009591127.1| | 199 | PREDICTED: uncharacterized protein LOC104088190 [Nicotiana tomentosiformis] |
JMSF030P18 | Sequence | 581 | 000502 (5) | ref|XP_009611150.1| | 236 | PREDICTED: uncharacterized protein LOC104104710 [Nicotiana tomentosiformis] | 764 | 000431 (3) | ref|XP_009591127.1| | 205 | PREDICTED: uncharacterized protein LOC104088190 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS055E04+ GTCCTTTGGATGGTGATATTCGCCTCTCCTGATATTCCTTCAACAA
____________________________________________________________
consensus GTCCTTTGGATGGTGATATTCGCCTCTCCTGATATTCCTTCAACAA
. : . : . : . : . : . :
JMFS055E04+ ATCTCTCTCCACCAAAAAATACGCGTTTCGCTCCATCTTCATCTTTCCTATTAGATCCCC
____________________________________________________________
consensus ATCTCTCTCCACCAAAAAATACGCGTTTCGCTCCATCTTCATCTTTCCTATTAGATCCCC
. : . : . : . : . : . :
JMFS055E04+ CATGGGAAGAACCAAAATGAGCATCCGAGAACATATCAGGATGTGGTAACAGGTCAATTG
____________________________________________________________
consensus CATGGGAAGAACCAAAATGAGCATCCGAGAACATATCAGGATGTGGTAACAGGTCAATTG
. : . : . : . : . : . :
JMFS055E04+ ACAGATATTCCCATTTCAGTTGCTTGAACACATATATGAAGTTCTTGTTATTGGAGAAGT
____________________________________________________________
consensus ACAGATATTCCCATTTCAGTTGCTTGAACACATATATGAAGTTCTTGTTATTGGAGAAGT
. : . : . : . : . : . :
JMFS055E04+ CCCTGGCTTCCTTGAGATTTACCACCTGCCAGTTCTCGTTTGTAGTATATAGCAGAAGGT
JMFS063B09+ TGAGATTTACCACCTGCCAGTTCTCGTTTGTAGTATATAGCAGAAGGT
____________________________________________________________
consensus CCCTGGCTTCCTTGAGATTTACCACCTGCCAGTTCTCGTTTGTAGTATATAGCAGAAGGT
. : . : . : . : . : . :
JMFS055E04+ TTCTTATGGTAATCGATGCCATAGGTGATGCCCAAGTTGCTCCTCCTCGACGTCGAGCAC
JMFS063B09+ TTCTTATGGTAATCGATGCCATAGGTGATGCCCAAGTTGCTCCTCCTCGACGTCGAGCAC
JMSF030P18+ CGACGTCGAGCAC
JMFS131A05+ CGACGTCGAGCAC
____________________________________________________________
consensus TTCTTATGGTAATCGATGCCATAGGTGATGCCCAAGTTGCTCCTCCTCGACGTCGAGCAC
. : . : . : . : . : . :
JMFS055E04+ CACCATGAGTTTCAAGTAGGAGGTTAACTGTACGCACTTCTAGAGTCATTCCATCAGCAA
JMFS063B09+ CACCATGAGTTTCAAGTAGGAGGTTAACTGTACGCACTTCTAGAGTCATTCCATCAGCAA
JMSF030P18+ CACCATGAGTTTCAAGTAGGAGGTTAACTGTACGCACTTCTAGAGTCATTCCATCAGCAA
JMFS131A05+ CACCATGAGTTTCAAGTAGGAGGTTAACTGTACGCACTTCTAGAGTCATTCCATCAGCAA
____________________________________________________________
consensus CACCATGAGTTTCAAGTAGGAGGTTAACTGTACGCACTTCTAGAGTCATTCCATCAGCAA
. : . : . : . : . : . :
JMFS055E04+ TCTTGTCGGCTAAACCATAGCCACTGCTCTTCGTGGAGCTAGTGAATGATGAAGCACTGC
JMFS063B09+ TCTTGTCGGCTAAACCATAGCCACTGCTCTTCGTGGAGCTAGTGAATGATGAAGCACTGC
JMSF030P18+ TCTTGTCGGCTAAACCATAGCCACTGCTCTTCGTGGAGCTAGTGAATGATGAAGCACTGC
JMFS131A05+ TCTTGTCGGCTAAACCATAGCCACTGCTCTTCGTGGAGCTAGTGAATGATGAAGCACTGC
____________________________________________________________
consensus TCTTGTCGGCTAAACCATAGCCACTGCTCTTCGTGGAGCTAGTGAATGATGAAGCACTGC
. : . : . : . : . : . :
JMFS055E04+ TAGGGCTCTTCTGTTCATCAACATCATCATTCTCCTCCAGAACAATATCAAGCCTATCAA
JMFS063B09+ TAGGGCTCTTCTGTTCATCAACATCATCATTCTCCTCCAGAACAATATCAAGCCTATCAA
JMSF030P18+ TAGGGCTCTTCTGTTCATCAACATCATCATTCTCCTCCAGAACAATATCAAGCCTATCAA
JMFS131A05+ TAGGGCTCTTCTGTTCATCAACATCATCATTCTCCTCCAGAACAATATCAAGCCTATCAA
____________________________________________________________
consensus TAGGGCTCTTCTGTTCATCAACATCATCATTCTCCTCCAGAACAATATCAAGCCTATCAA
. : . : . : . : . : . :
JMFS055E04+ TTTGGACGACTATTGGCTCTATTTGCACATTGCTTACTGATGGAAGAATAATCTCCAATT
JMFS063B09+ TTTGGACGACTATTGGCTCTATTTGCACATTGCTTACTGATGGAAGAATAATCTCCAATT
JMSF030P18+ TTTGGACGACTATTGGCTCTATTTGCACATTGCTTACTGATGGAAGAATAATCTCCAATT
JMFS131A05+ TTTGGACGACTATTGGCTCTATTTGCACATTGCTTACTGATGGAAGAATAATCTCCAATT
____________________________________________________________
consensus TTTGGACGACTATTGGCTCTATTTGCACATTGCTTACTGATGGAAGAATAATCTCCAATT
. : . : . : . : . : . :
JMFS055E04+ TTCCGACTTTTGCAGTGGTAACATTCAGTGCCGGCGGTAGC
JMFS063B09+ TTCCGACTTTTGCAGTGGTAACATTCAGTGCCGGCGGTAGCCCCACACTAGCATGCAAAG
JMSF030P18+ TTCCGACTTTTGCAGTGGTAACATTCAGTGCCGGCGGTAGCCCCACACTAGCATGCAAAG
JMSF008E16+ GGTAACATTCAGTGCCGGCGGTAGCCCCACACTAGCATGCAAAG
JMFS131A05+ TTCCGACTTTTGCAGTGGTAACATTCAGTGCCGGCGGTAGCCCCACACTAGCATGCAAAG
____________________________________________________________
consensus TTCCGACTTTTGCAGTGGTAACATTCAGTGCCGGCGGTAGCCCCACACTAGCATGCAAAG
. : . : . : . : . : . :
JMFS063B09+ CATCTCCATTTATATCTAAATTAGAAAGCTGCGCGGTGCGCCCCTGCAACTTAAACTGAT
JMSF030P18+ CATCTCCATTTATATCTAAATTAGAAAGCTGCGCGGTGCGCCCCTGCAACTTAAACTGAT
JMSF008E16+ CATCTCCATTTATATCTAAATTAGAAAGCTGCGCGGTGCGCCCCTGCAACTTAAACTGAT
JMFS131A05+ CATCTCCATTTATATCTAAATTAGAAAGCTGCGCGGTGCGCCCCTGCAACTTAAACTGAT
____________________________________________________________
consensus CATCTCCATTTATATCTAAATTAGAAAGCTGCGCGGTGCGCCCCTGCAACTTAAACTGAT
. : . : . : . : . : . :
JMFS063B09+ CTCTACTGAACGACTTGAGCCAATACTTGAGCGTGTACTCCAGAGCTCGCGCTATTATAG
JMSF030P18+ CTCTACTGAACGACTTGAGCCAATACTTGAGCGTGTACTCCAGAGCTCGCGCTATTATAG
JMSF008E16+ CTCTACTGAACGACTTGAGCCAATACTTGAGCGTGTACTCCAGAGCTCGCGCTATTATAG
JMFS131A05+ CTCTACTGAACGACTTGAGCCAATACTTGAGCGTGTACTCCAGAGCTCGCGCTATTATAG
____________________________________________________________
consensus CTCTACTGAACGACTTGAGCCAATACTTGAGCGTGTACTCCAGAGCTCGCGCTATTATAG
. : . : . : . : . : . :
JMFS063B09+ ACTCCATCTCCGAACTCTGACCTCCCAGAAGCTCCCTGGAGACGAAAAAGTAGACAATTC
JMSF030P18+ ACTCCATCTCCGAACTCTGACCTCCCAGAAGCTCCCTGGAGACGAAAAAGTAGACAATTC
JMSF008E16+ ACTCCATCCCCGAACTCTGACCTCCCAGAAGCTCCCTGGAGACGAAAAAGTAGACAATTC
JMFS131A05+ ACTCCATCTCCGAACTCTGACCTCCCAGAAGCTCCCTGGAGACGAAAAAGTAGACAATTC
____________________________________________________________
consensus ACTCCATCTCCGAACTCTGACCTCCCAGAAGCTCCCTGGAGACGAAAAAGTAGACAATTC
. : . : . : . : . : . :
JMFS063B09+ TGCAATTCAGTAGATCTAGAAACCACCAGGAAGGAAGCAACGCTCTAGACGGAG
JMSF030P18+ TGCAATTCAGTAGATCTAGAAACCACCAGGAAGGAAGCAACGCTCTAGACGGAGAAGGAT
JMSF008E16+ TGCAATTCAGTAGATCTAGAAACCACCAGGAAGGAAGCAACGCTCTAGACGGAGAAGGAT
JMFS131A05+ TGCAATTCAGTAGATCTAGAAACCACCAGGAAGGAAGCAACGCTCTAGACGGAGAAGGAT
____________________________________________________________
consensus TGCAATTCAGTAGATCTAGAAACCACCAGGAAGGAAGCAACGCTCTAGACGGAGAAGGAT
. : . : . : . : . : . :
JMSF030P18+ GCGGTGGAGCATCAGATCGGGTAC
JMSF008E16+ GCGGTGGAGCATCAGATCGGGTAC
JMFS131A05+ GCGGTGGAGCATCAGATCGGGTACGGTGAAGATCGGAGCCGGAGCGGAAGGTTAATTTGG
____________________________________________________________
consensus GCGGTGGAGCATCAGATCGGGTACGGTGAAGATCGGAGCCGGAGCGGAAGGTTAATTTGG