| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS029G05 | Sequence | 606 | 000498 (5) | ref|XP_009596424.1| | 2e-90 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis] | |||||
| JMFS127F02 | Sequence | 608 | 000498 (5) | ref|XP_009596424.1| | 1e-93 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis] | |||||
| JMSF017I12 | Sequence | 512 | 000498 (5) | ref|XP_011019441.1| | 218 | PREDICTED: uncharacterized protein LOC105122188 [Populus euphratica] | 827 | 009923 (4) | ref|XP_009802768.1| | 8e-29 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
| JMSF018D24 | Sequence | 219 | 000498 (5) | ref|XP_010047560.1| | 59.3 | PREDICTED: uncharacterized protein LOC104436476 [Eucalyptus grandis] gb|KCW79504 | 765 | 009923 (4) | ref|XP_009802768.1| | 2e-21 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
| JMSF045G02 | Sequence | 737 | 000498 (5) | ref|XP_009596424.1| | 2e-103 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis] | 828 | 009923 (4) | ref|XP_009802768.1| | 8e-29 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF045G02+ CGGACAATATAAGGCAGTCTTTCCAATCTAGCCTTGGGGA
____________________________________________________________
consensus CGGACAATATAAGGCAGTCTTTCCAATCTAGCCTTGGGGA
. : . : . : . : . : . :
JMSF045G02+ CAAGGCTGCAGCTTAGTGGAATAGTTTGACATGCCAAATGAGTATCGGTTGTTAGGCGGT
JMFS127F02+ TAGGCGGT
____________________________________________________________
consensus CAAGGCTGCAGCTTAGTGGAATAGTTTGACATGCCAAATGAGTATCGGTTGTTAGGCGGT
. : . : . : . : . : . :
JMFS029G05+ AACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
JMSF045G02+ CCCTCAAACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
JMFS127F02+ CCCTCAAACTTTCNTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
____________________________________________________________
consensus CCCTCAAACTTTCCTCGGTCACTCGATACTCAACTTTCCCTCTCCTGTTTTTAACGTCAA
. : . : . : . : . : . :
JMFS029G05+ TANATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
JMSF045G02+ TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
JMFS127F02+ TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
____________________________________________________________
consensus TAAATCCATCACGCTTGATTTGCTCCAGATAGTTTTTGCCCAACCGACCTTCAATTCCTC
. : . : . : . : . : . :
JMFS029G05+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMSF045G02+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMSF017I12+ TAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
JMFS127F02+ TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
____________________________________________________________
consensus TCTTCAGATTATAGCGACCAGCAATATTGATGACTGTTGGTATATCCCTATACTTTGATG
. : . : . : . : . : . :
JMFS029G05+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMSF045G02+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMSF017I12+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
JMFS127F02+ CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
____________________________________________________________
consensus CATACAAAAGCACAGCATTCCCTCCTTTGCTATGCCCAATAATTGCTGTTATGAAACGTC
. : . : . : . : . : . :
JMFS029G05+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMSF045G02+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMSF017I12+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
JMFS127F02+ CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
____________________________________________________________
consensus CATTCTGACGAAAATGTTCAACTACAGTATGCAAATCATCAGCTTCTCTACGGTAGTTAC
. : . : . : . : . : . :
JMFS029G05+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMSF045G02+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMSF017I12+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
JMFS127F02+ CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
____________________________________________________________
consensus CATACTGGAATGAACCCTCACTTTCTCCATTGCCTGCAAAATCAAAGCGGAAAGCACTAA
. : . : . : . : . : . :
JMFS029G05+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMSF045G02+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMSF017I12+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
JMFS127F02+ TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
____________________________________________________________
consensus TTCCTCCTTTCTCAAAAGCAGCAGCAAGGTTCACCATGGGAATGCGATCCTTTGAGGATT
. : . : . : . : . : . :
JMFS029G05+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF045G02+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF017I12+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMSF018D24+ ACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
JMFS127F02+ TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
____________________________________________________________
consensus TGAAACCATGACACACAATTACAAGCTCCTTAGAGCCTGTTTCATGTAATATGCCCAAAA
. : . : . : . : . : . :
JMFS029G05+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF045G02+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF017I12+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMSF018D24+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTG
JMFS127F02+ GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTGCTCCATATA
____________________________________________________________
consensus GCTTCTCATCATGGTTGTTCACCACCACTATCTTTTTACGTTGCATCACTGCTCCATATA
. : . : . : . : . : . :
JMFS127F02+ TCGACAATTCCAGAGCTTCTTTCTCGAGGATTTTGAAGCAAGTTGTACACTTGTACTATC
____________________________________________________________
consensus TCGACAATTCCAGAGCTTCTTTCTCGAGGATTTTGAAGCAAGTTGTACACTTGTACTATC