Contig 000491:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A11+                                       CAAAATGCATTTACACAATCCAGACAGTCCGT
                      ____________________________________________________________
consensus                                         CAAAATGCATTTACACAATCCAGACAGTCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A11+           CCAAAGCAGCACTACGGATGTTCGGATATGGATCCTTGGTAAACCCGAACAGAACTGTAA
                      ____________________________________________________________
consensus             CCAAAGCAGCACTACGGATGTTCGGATATGGATCCTTGGTAAACCCGAACAGAACTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A11+           ACAATACCGACGGCCGTATCACAAACCTACTCACATTCTGCAACAGCCAATACCGGATAG
                      ____________________________________________________________
consensus             ACAATACCGACGGCCGTATCACAAACCTACTCACATTCTGCAACAGCCAATACCGGATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+                                       AAATGCCGATTCGTTGTTGACGTCAGTAGCAG
JMFS122A11+           AAATGCGTGGTCGGAAAACCAGTGAGAGAAATGCCGATTCGTTGTTGACGTCAGTAGCAG
                      ____________________________________________________________
consensus             AAATGCGTGGTCGGAAAACCAGTGAGAGAAATGCCGATTCGTTGTTGACGTCAGTAGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           AGAGGGAGAGGAGAATAGATAGAGAATCTGCGAGGGAGCGAGTGGAGACGGAAGGGAGGA
JMFS122A11+           AGAGGGAGAGGAGAATAGATAGAGAATCTGCGAGGGAGCGAGTGGAGACGGAAGGGAGGA
                      ____________________________________________________________
consensus             AGAGGGAGAGGAGAATAGATAGAGAATCTGCGAGGGAGCGAGTGGAGACGGAAGGGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           GCGAGAAGGAGTGGATGGCGGTGATAACGTCTTGTCGTAGGCGAGGGTGGCGAAGAGAGA
JMFS122A11+           GCGAGAAGGAGTGGATGGCGGTGATAACGTCTTGTCGTAGGCGAGGGTGGCGAAGAGAGA
                      ____________________________________________________________
consensus             GCGAGAAGGAGTGGATGGCGGTGATAACGTCTTGTCGTAGGCGAGGGTGGCGAAGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           GCAGATGGAGGATGGGGAGGATGGGGCGGTGGTGACTGTCGCGGTGGTTAGGGTTTTGGA
JMFS122A11+           GCAGATGGAGGATGGGGAGGATGGGGCGGTGGTGACTGTCGCGGTGGTTAGGGTTTTGGA
                      ____________________________________________________________
consensus             GCAGATGGAGGATGGGGAGGATGGGGCGGTGGTGACTGTCGCGGTGGTTAGGGTTTTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           GGGAGAGAGTTAGGGTTTTGAGAATAACAGAGAGAGAAGAGTCGGTGGTGGAGGGGTTGC
JMFS122A11+           GGGAGAGAGTTAGGGTTTTGAGAATAACAGAGAGAGAAGAGTCGGTGGTGGAGGGGTTGC
                      ____________________________________________________________
consensus             GGGAGAGAGTTAGGGTTTTGAGAATAACAGAGAGAGAAGAGTCGGTGGTGGAGGGGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           TGACCAGAGAAAGAACAACGCTTAAGGCTTGGAAAGGAGGAGGTGAATCCCGGCTGTTAA
JMFS122A11+           TGACCAGAGAAAGAACAACGCTTAAGGCTTGGAAAGGAGGAGGTGAATCCCGGCTGTTAA
                      ____________________________________________________________
consensus             TGACCAGAGAAAGAACAACGCTTAAGGCTTGGAAAGGAGGAGGTGAATCCCGGCTGTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004C01+           TGGCCGCGTTTTCGAACTCTGTAAGGAGCTGCTTTTCCATCGACGATTGTC         
JMFS122A11+           TGGCCGCGTTTTCGAACTCTGTAAGGAGCTGCTTTTCCATCGACGATTGTCGCCGGCGTT
                      ____________________________________________________________
consensus             TGGCCGCGTTTTCGAACTCTGTAAGGAGCTGCTTTTCCATCGACGATTGTCGCCGGCGTT