Contig 000489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS050E07Sequence586000489 (3)ref|XP_006352989.1|116PREDICTED: uncharacterized protein LOC102590895 [Solanum tuberosum]
JMFS117H07Sequence574000489 (3)ref|XP_004233143.1|2e-13PREDICTED: 187-kDa microtubule-associated protein AIR9 [Solanum lycopersicum] r
JMSF036E19Sequence700000489 (3)ref|XP_006352989.1|124PREDICTED: uncharacterized protein LOC102590895 [Solanum tuberosum]341002923 (3)ref|XP_011091079.1|2e-30PREDICTED: ADP-ribosylation factor-like protein 5 [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036E19+                                                  TNTTAGCAGAGTCATACTTGG
                      ____________________________________________________________
consensus                                                    TNTTAGCAGAGTCATACTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+                                                              CTGACTTTC
JMSF036E19+           ATGTATCAGAACGAGATGATGCTTTTGGAGTCGCAGCAGGAGATGAAGGAACTGACTTTC
                      ____________________________________________________________
consensus             ATGTATCAGAACGAGATGATGCTTTTGGAGTCGCAGCAGGAGATGAAGGAACTGACTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           TAGTTTCTGAAATAGTTGATCGAGTAAGGGATCTGCCATTAGTTGATGGCAGTGAACTCC
JMSF036E19+           TAGTTTCTGAAATAGNTGATCGAGTAAGGGATCTGCCATTAGCTGATGGCAGTGAACTCC
                      ____________________________________________________________
consensus             TAGTTTCTGAAATAGTTGATCGAGTAAGGGATCTGCCATTAGTTGATGGCAGTGAACTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           GTCTAATTTCAGGAAGTGATCTCCTCACAGGATCTGGGGCAGAGGAGGTAGGCTTTTTTG
JMSF036E19+           GTNTAATTTCAGGAAGTGATCTCCTCACAGGATCTGGGGCAGAGGAGGTAGGCTTTTTTG
JMFS117H07+                                     ACAGGATCTGGGGCAGAGGAGGTAGGCTTTTTTG
                      ____________________________________________________________
consensus             GTCTAATTTCAGGAAGTGATCTCCTCACAGGATCTGGGGCAGAGGAGGTAGGCTTTTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           CCACAACAGAATTTACATTAGTAGACCTCTTAGTAACTGTTGGCTGTTTATCAGGCAAAC
JMSF036E19+           CCACAACAGAATTTACANTAGTAGACCTCTTAGTAACTGTTGGCTGTTTATCAGGCAAAC
JMFS117H07+           CCACAACAGAATTTACATTAGTAGACCTCTTAGTAACTGTTGGCTGTTTATCAGGCAAAC
                      ____________________________________________________________
consensus             CCACAACAGAATTTACATTAGTAGACCTCTTAGTAACTGTTGGCTGTTTATCAGGCAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           CACCGGTGCTGTTTCTTCTGGCAACTGGGACTCCAGTAGAACTCCTTGAAGCACTACTAA
JMSF036E19+           CACCGGTGCTGTTTCTTCTGGCAACTGGGACTCCAGTAGAACTCCTTGAAGCACTANTAA
JMFS117H07+           CACCGGTGCTGTTTCTTCTGGCAACTGGGACTCCAGTAGAACTCCTTGAAGCACTACTAA
                      ____________________________________________________________
consensus             CACCGGTGCTGTTTCTTCTGGCAACTGGGACTCCAGTAGAACTCCTTGAAGCACTACTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           GGGTAGGTTTTGTCAATGTTGATGACTTGAACCCACTGGAATTAGTATCAGCTCCATTCA
JMSF036E19+           GGGTAGGTTTTGTCAATGTTGATGACTTGAACCCACTGGAATTAGTATCAGCTCCATTCA
JMFS117H07+           GGGTAGGTTTTGTCAATGTTGATGACTTGAACCCACTGGAATTAGTATCAGCTCCATTCA
                      ____________________________________________________________
consensus             GGGTAGGTTTTGTCAATGTTGATGACTTGAACCCACTGGAATTAGTATCAGCTCCATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           TTGATTCCGCTTTCTTCGCTAACCCAGCATTCTTCATCCTAGAGCTCTGTTTCACATTCT
JMSF036E19+           TTGATTCCGCTTTCTTCGCTAACCCAGCATTCTTCATCCTAGAGCTCTGTTTCACATTCT
JMFS117H07+           TTGATTCCGCTTTCTTCGCTAACCCAGCATTCTTCATCCTAGAGCTCTGTTTCACATTCT
                      ____________________________________________________________
consensus             TTGATTCCGCTTTCTTCGCTAACCCAGCATTCTTCATCCTAGAGCTCTGTTTCACATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           TAGTTGTTTTCACATCCTCAGCAGATGATTGCTTCTGCGACTTTTCCACATCATCCTCAA
JMSF036E19+           TAGTTGTTTTCACATCCTCAGCAGATGATTGCTTNTGCGACTTTTCCACATCATCCTCAA
JMFS117H07+           TAGTTGTTTTCACATCCTCAGCAGATGATTGCTTCTGCGACTTTTCCACATCATCCTCAA
                      ____________________________________________________________
consensus             TAGTTGTTTTCACATCCTCAGCAGATGATTGCTTCTGCGACTTTTCCACATCATCCTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           CCACAGTTGGCTTCTCTAATTCTGGACTTTGTGCCTCTTCCACAGCATCCTCCGTGTACC
JMSF036E19+           CCACAGTTGGCTTCTCTAATTCTGGACTTTGTGCNTCTTCCACAGCATCCTCCGTGTACC
JMFS117H07+           CCACAGTTGGCTTCTCTAATTCTGGACTTTGTGCCTCTTCCACAGCATCCTCCGTGTACC
                      ____________________________________________________________
consensus             CCACAGTTGGCTTCTCTAATTCTGGACTTTGTGCCTCTTCCACAGCATCCTCCGTGTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           TTGGAATTGAACCATCCATTCTGACGTTTCAACTATGAAGAGAACAACCTAGTAGTAACT
JMSF036E19+           TTGGAATTGAACCATCCATTCTGACGTTTCAACTATGAAGAGAACAACCTAGTAGTAACT
JMFS117H07+           TTGGAATTGAACCATCCATTCTGACGTTTCAACTATGAAGAGAACAACCTAGTAGTAACT
                      ____________________________________________________________
consensus             TTGGAATTGAACCATCCATTCTGACGTTTCAACTATGAAGAGAACAACCTAGTAGTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS050E07+           GTGTTTTCCTTAGGGTTTTGCAAAAGGAGAAATGCTT                       
JMSF036E19+           GTGTTTTCCTTAGGGTTTTGCAAAAGGAGAAATGCTTTGGAACAGAGAATCCANGGAGAG
JMFS117H07+           GTGTTTTCCTTAGGGTTTTGCAAAAGGAGAAATGCTTTGGAACAGAGAATCCATGGAGAG
                      ____________________________________________________________
consensus             GTGTTTTCCTTAGGGTTTTGCAAAAGGAGAAATGCTTTGGAACAGAGAATCCATGGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036E19+           AGAGAGAGAGAGCGC                                             
JMFS117H07+           AGAGAGAGAGAGCGCTCTGAGTGAAAGCGTGAGGAGAAAAGGCTAAAAAGAGAGAGTGAG
                      ____________________________________________________________
consensus             AGAGAGAGAGAGCGCTCTGAGTGAAAGCGTGAGGAGAAAAGGCTAAAAAGAGAGAGTGAG