Contig 000484:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS162G05+                                                              TGNCATCCC
                      ____________________________________________________________
consensus                                                                TGNCATCCC
 
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JMFS162G05+           AAAGTCACTCTGGTTCTGGGAGTCACTAAACGCATCATCTTCCACAACTCTTNTAGTGGT
                      ____________________________________________________________
consensus             AAAGTCACTCTGGTTCTGGGAGTCACTAAACGCATCATCTTCCACAACTCTTNTAGTGGT
 
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JMFS162G05+           CCTCTTTGACTTCACAGAACTTCCATTTGCCATTGGAGTTCTGAACGAATTTAACGGAAC
                      ____________________________________________________________
consensus             CCTCTTTGACTTCACAGAACTTCCATTTGCCATTGGAGTTCTGAACGAATTTAACGGAAC
 
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JMFS162G05+           AGGGGATATCGGGTGACCAAAAGACCCTTGTTGAGCCGGTCTTCCTCCCGAGTCATGAGA
                      ____________________________________________________________
consensus             AGGGGATATCGGGTGACCAAAAGACCCTTGTTGAGCCGGTCTTCCTCCCGAGTCATGAGA
 
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JMFS162G05+           CAAAAACGGGTAAAACGGAGACACTCCGGGAGGGAAAGGACCACTCGGGGGAACACACAC
                      ____________________________________________________________
consensus             CAAAAACGGGTAAAACGGAGACACTCCGGGAGGGAAAGGACCACTCGGGGGAACACACAC
 
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JMFS162G05+           AAAGGGCGAAGGTTGTGGAGAACCAACTGGCGACATCCCACTCGCAGATGGAAATACAGG
                      ____________________________________________________________
consensus             AAAGGGCGAAGGTTGTGGAGAACCAACTGGCGACATCCCACTCGCAGATGGAAATACAGG
 
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JMFS162G05+           AACTAAACATTTTAAAGGCTTTACATCCAAGACCCTAGACATATCAACAGACCCAGATGT
                      ____________________________________________________________
consensus             AACTAAACATTTTAAAGGCTTTACATCCAAGACCCTAGACATATCAACAGACCCAGATGT
 
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JMFS162G05+           TCGAGCCGAGTTTGAAGCTGTACCTTGCTCCATTTAAGCAGAACTTTCCAATCAACCAAC
JMFS129G07+                             TGTACCTTGCTCCATTTAAGCAGAACTTTCCAATCAACCAAC
                      ____________________________________________________________
consensus             TCGAGCCGAGTTTGAAGCTGTACCTTGCTCCATTTAAGCAGAACTTTCCAATCAACCAAC
 
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JMFS162G05+           CACACAAAAATCACAAATTTCAATCACATTAATCCCCAAAACACAACCTTTCACCACCTT
JMFS129G07+           CACACAAAAATCACAAATTTCAATCACATTAATCCCCAAAACACAACCTTTCACCACCTT
JMFS063E08+                                     CATTAATCCCCAAAACACAACCTTTCACCACCTT
JMFS112A02+                                            CCCCAAAACACAACCTTTCACCACCTT
                      ____________________________________________________________
consensus             CACACAAAAATCACAAATTTCAATCACATTAATCCCCAAAACACAACCTTTCACCACCTT
 
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JMFS162G05+           TAAACTTAACCTTTGCTACAAAAAACAAACCCATGTCAAAGAAA                
JMFS129G07+           TAAACTTAACCTTTGCTACAAAAAACAAACCCATGTCAAAGAAATGCCATCTGAAATTCT
JMFS063E08+           TAAACTTAACCTNTGCTACAAAAAACAAACCCATGTCAAAGAAATGCCATCTGAAATTCT
JMFS112A02+           TAAACTTAACCTTTGCTACAAAAAACAAACCCATGTCAAAGAAATGCCATCTGAAATTCT
                      ____________________________________________________________
consensus             TAAACTTAACCTTTGCTACAAAAAACAAACCCATGTCAAAGAAATGCCATCTGAAATTCT
 
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JMFS129G07+           GAACAACAAAAATATCATTTCTTTAAACCATGCAGCAAACAATCAGAAGAGATTCATTAC
JMFS063E08+           GAACAACAAAAATATCATTTCTTTAAACCATGCAGCAAACAATCAGAAGAGATTCATTAC
JMFS112A02+           GAACAACAAAAATATCATTTCTTTAAACCATGCAGCAAACAATCAGAAGAGATTCATTAC
                      ____________________________________________________________
consensus             GAACAACAAAAATATCATTTCTTTAAACCATGCAGCAAACAATCAGAAGAGATTCATTAC
 
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JMFS129G07+           CAAATCCCCCAAAGATACAAGCTTTAACTTAATTACACAAACATATTGCTCCCTACACCA
JMFS063E08+           CAAATCCCCCAAAGATACAAGCTTTAACTTAATTACACAAACATATTGCTCCCTACACCA
JMFS112A02+           CAAATCCCCCAAAGATACAAGCTTTAACTTAATTACACAAACATATTGCTCCCTACACCA
                      ____________________________________________________________
consensus             CAAATCCCCCAAAGATACAAGCTTTAACTTAATTACACAAACATATTGCTCCCTACACCA
 
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JMFS129G07+           TGGAAACACTAGAAAATCAATGATAACCCCCAATATCCAAATAAAGATTCAAACTTTCAC
JMFS063E08+           TGGAAACACTAGAAAATCAATGATAACCCCCAATATCCAAATAAAGATTCAAACTTTCAC
JMFS112A02+           TGGAAACACTAGAAAATCAATGATAACCCCCAATATCCAAATAAAGATTCAAACTTTCAC
                      ____________________________________________________________
consensus             TGGAAACACTAGAAAATCAATGATAACCCCCAATATCCAAATAAAGATTCAAACTTTCAC
 
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JMFS129G07+           GAAATGAACAGAAAGGAGAAAAGCCCTAGTTTAGCTAATTGCTAAATACCAAAATCCATA
JMFS063E08+           GAAATGAACAGAAAGGAGAAAAGCCCTAGTTTAGCTAATTGCTAAATACCAAAATCCATA
JMFS112A02+           GAAATGAACAGAAAGGAGAAAAGCCCTAGTTTAGCTAATTGCTAAATACCAAAATCCATA
                      ____________________________________________________________
consensus             GAAATGAACAGAAAGGAGAAAAGCCCTAGTTTAGCTAATTGCTAAATACCAAAATCCATA
 
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JMFS129G07+           ATCGACTTTAGCATAAATAATTTTTTTTTTAAGCAAAAATCGCATAAAAAATCATAATTA
JMFS063E08+           ATCGACTTTAGCATAAATAATTTTTTTTTTAAGCAAAAATCGCATAAAAAATCATAATTA
JMFS112A02+           ATCGACTTTAGCATAAATAATTTTTTTTTTAAGCAAAAATCGCATAAAAAATCATAATTA
                      ____________________________________________________________
consensus             ATCGACTTTAGCATAAATAATTTTTTTTTTAAGCAAAAATCGCATAAAAAATCATAATTA
 
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JMFS129G07+           AGCCTAACAAAGTCAATATCAAAGGCCTTATGTAGCAAGTATAGAGAAAAGGTGTCAGAA
JMFS063E08+           AGCCTAACAAAGTCAATATCAAAGGCCTTATGTAGCAAGTATAGAGAAAAGGTGTCAGAA
JMFS112A02+           AGCCTAACAAAGTCAATATCAAAGGCCTTATGTAGCAAGTATAGAGAAAAGGTGTCAGAA
                      ____________________________________________________________
consensus             AGCCTAACAAAGTCAATATCAAAGGCCTTATGTAGCAAGTATAGAGAAAAGGTGTCAGAA
 
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JMFS129G07+           AAATTAAAGATAACTTTTTTATCAGTCTTTTCCGCAATAAAATGGACCTAAAAACAGAAC
JMFS063E08+           AAATTAAAGATAACTTTTTTATCAGTCTTTTCCGCAATAAAATGGACCTAAAAACAGAAC
JMFS112A02+           AAATTAAAGATAACTTTTTTATCAGTCTTTTCCGCAATAAAATGGACCTAAAAACAGAAC
                      ____________________________________________________________
consensus             AAATTAAAGATAACTTTTTTATCAGTCTTTTCCGCAATAAAATGGACCTAAAAACAGAAC
 
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JMFS129G07+           CAAGATTGTAGATCAGAAATTAAAGCAAACGGAAAGAGAAATGA                
JMFS063E08+           CAAGATTGTAGATCAGAAATTAAAGCAAACGGAAAGAGAAATGATCTATCATTACAAAAT
JMFS112A02+           CAAGATTGTAGATCAGAAATTAAAGCAAACGGAAAGAGAAATGATCTATCATTACAAAAT
                      ____________________________________________________________
consensus             CAAGATTGTAGATCAGAAATTAAAGCAAACGGAAAGAGAAATGATCTATCATTACAAAAT
 
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JMFS063E08+           ACTCCGTACCTTAGAAACTTTTGGTAGAGAGCTGAGATTTATGGA               
JMFS112A02+           ACTCCGTACCTTAGAAACTTTTGGTAGAGAGCTGAGATTTATGGAGAGCGAGGGATGGAG
                      ____________________________________________________________
consensus             ACTCCGTACCTTAGAAACTTTTGGTAGAGAGCTGAGATTTATGGAGAGCGAGGGATGGAG