Contig 000481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007G23Sequence517000481 (2)emb|CDP07674.1|1e-77unnamed protein product [Coffea canephora]677021229gb|KDP20383.1|4e-82hypothetical protein JCGZ_05266 [Jatropha curcas]
JMFS109A02Sequence615000481 (2)emb|CDP07674.1|2e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS109A02+                                                        GAGTCATTGGGTGAG
                      ____________________________________________________________
consensus                                                          GAGTCATTGGGTGAG
 
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JMFF007G23+                                                           TAGCACGACTTC
JMFS109A02+           CCGTAACAGGTAAGGCATCAATGGTTTTATACACATGATCTGGAACAGTAGCACGACTTC
                      ____________________________________________________________
consensus             CCGTAACAGGTAAGGCATCAATGGTTTTATACACATGATCTGGAACAGTAGCACGACTTC
 
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JMFF007G23+           TCAATTCTTGAGATAAGGAATCCGCTTGTGCCTTTGACGGCACCTTTCCTGTTAGGAGAA
JMFS109A02+           TCAATTCTTGAGATAAGGAATCCGCTTGTGCCTTTGACGGCACCTTTCCTGTTAGGAGAA
                      ____________________________________________________________
consensus             TCAATTCTTGAGATAAGGAATCCGCTTGTGCCTTTGACGGCACCTTTCCTGTTAGGAGAA
 
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JMFF007G23+           GCCACAGGAGACCTTCAGGCATTGGCTCTCCACCAAGCTGTGCACCAGGTAGTAACTTCT
JMFS109A02+           GCCACAGGAGACCTTCAGGCATTGGCTCTCCACCAAGCTGTGCACCAGGTAGTAACTTCT
                      ____________________________________________________________
consensus             GCCACAGGAGACCTTCAGGCATTGGCTCTCCACCAAGCTGTGCACCAGGTAGTAACTTCT
 
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JMFF007G23+           GGCATTCAGGTATAGACAATCCCCTAAAGCGGATTCCCTCATCTGGGTCAAGTAATGAGG
JMFS109A02+           GGCATTCAGGTATAGACAATCCCCTAAAGCGGATTCCCTCATCTGGGTCAAGTAATGAGG
                      ____________________________________________________________
consensus             GGCATTCAGGTATAGACAATCCCCTAAAGCGGATTCCCTCATCTGGGTCAAGTAATGAGG
 
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JMFF007G23+           TTTCCCACAATAATCCAGTCATTCCTCTCATACCACCAATTACCATATCTACTGTGATGT
JMFS109A02+           TTTCCCACAATAATCCAGTCATTCCTCTCATACCACCAATTACCATATCTACTGTGATGT
                      ____________________________________________________________
consensus             TTTCCCACAATAATCCAGTCATTCCTCTCATACCACCAATTACCATATCTACTGTGATGT
 
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JMFF007G23+           TTCCAAGTTGAACTTTTCCATGTTGTGACTTGATTTTCTTGAGGCGCTCCTGCTGTTCTG
JMFS109A02+           TTCCAAGTTGAACTTTTCCATGTTGTGACTTGATTTTCTTGAGGCGCTCCTGCTGTTCTG
                      ____________________________________________________________
consensus             TTCCAAGTTGAACTTTTCCATGTTGTGACTTGATTTTCTTGAGGCGCTCCTGCTGTTCTG
 
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JMFF007G23+           GAATCAATTCCTGAAGCTGAGAACGGAGGTCCAGATCAGATGAGGTCTGAACTTGGAGCC
JMFS109A02+           GAATCAATTCCTGAAGCTGAGAACGGAGGTCCAGATCAGATGAGGTCTGAACTTGGAGCC
                      ____________________________________________________________
consensus             GAATCAATTCCTGAAGCTGAGAACGGAGGTCCAGATCAGATGAGGTCTGAACTTGGAGCC
 
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JMFF007G23+           AGCGCACCGAATTGCTAAGGTTAGGCTGCTGAACAGCTCGAGATCGCAACTTTGATAGTA
JMFS109A02+           AGCGCACCGAATTGCTAAGGTTAGGCTGCTGAACAGCTCGAGATCGCAACTTTGATAGTA
                      ____________________________________________________________
consensus             AGCGCACCGAATTGCTAAGGTTAGGCTGCTGAACAGCTCGAGATCGCAACTTTGATAGTA
 
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JMFF007G23+           GAGAAACGCTTCGGTAGAATACCATTGCTATCAATCGAGATACCACTAGAGAGACGCTGG
JMFS109A02+           GAGAAACGCTTCGGTAGAATACCATTGCTATCAATCGAGATACCACTAGAGAGACGCTGG
                      ____________________________________________________________
consensus             GAGAAACGCTTCGGTAGAATACCATTGCTATCAATCGAGATACCACTAGAGAGACGCTGG
 
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JMFF007G23+           GAGAGATTAGGTGTATTGGGAGAGA                                   
JMFS109A02+           GAGAGATTAGGTGTATTGGGAGAGATCTGAGAAAGAGAAAGAGAGAGAGAGCAGAGACTA
                      ____________________________________________________________
consensus             GAGAGATTAGGTGTATTGGGAGAGATCTGAGAAAGAGAAAGAGAGAGAGAGCAGAGACTA