Contig 000479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003F18Sequence427000479 (7)ref|XP_009764289.1|3e-06PREDICTED: ethylene-overproduction protein 1-like isoform X2 [Nicotiana sylvest722012217 (4)ref|XP_009764288.1|5e-54PREDICTED: ethylene-overproduction protein 1-like isoform X1 [Nicotiana sylvest
JMFS021G12Sequence589000479 (7)ref|XP_009764289.1|2e-15PREDICTED: ethylene-overproduction protein 1-like isoform X2 [Nicotiana sylvest
JMFS041C08Sequence620000479 (7)ref|XP_009764288.1|2e-57PREDICTED: ethylene-overproduction protein 1-like isoform X1 [Nicotiana sylvest
JMFS106B12Sequence639000479 (7)ref|XP_009764289.1|6e-16PREDICTED: ethylene-overproduction protein 1-like isoform X2 [Nicotiana sylvest
JMFS120D03Sequence609000479 (7)ref|XP_009764288.1|5e-41PREDICTED: ethylene-overproduction protein 1-like isoform X1 [Nicotiana sylvest
JMSF037M03Sequence648000479 (7)ref|XP_009764289.1|6e-32PREDICTED: ethylene-overproduction protein 1-like isoform X2 [Nicotiana sylvest702012217 (4)ref|XP_009764288.1|1e-55PREDICTED: ethylene-overproduction protein 1-like isoform X1 [Nicotiana sylvest
JMSF039B06Sequence620000479 (7)ref|XP_009764289.1|3e-27PREDICTED: ethylene-overproduction protein 1-like isoform X2 [Nicotiana sylvest783012217 (4)ref|XP_009764288.1|8e-59PREDICTED: ethylene-overproduction protein 1-like isoform X1 [Nicotiana sylvest

Alignment

This contig is upended


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JMFS041C08+                                                            TATCTCAACCA
                      ____________________________________________________________
consensus                                                              TATCTCAACCA
 
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JMFS041C08+           GGCCGATAAAACAACCTTGGAATGCACGTCAACGGCGTGTTGACGGGCGGATTGAAGGCA
                      ____________________________________________________________
consensus             GGCCGATAAAACAACCTTGGAATGCACGTCAACGGCGTGTTGACGGGCGGATTGAAGGCA
 
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JMFS041C08+           CCGCCGGAGCAATTTCGGATCACCCAGATTACACAGCACCGAGAACTGCTCCAAATACAC
JMFS120D03+           CCGCCGGAGCAATTTCGGATCACCCAGATTACACAGCACCGAGAACTGCTCCAAATACAC
JMSF037M03+                                                              CAAATACAC
                      ____________________________________________________________
consensus             CCGCCGGAGCAATTTCGGATCACCCAGATTACACAGCACCGAGAACTGCTCCAAATACAC
 
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JMFS041C08+           CCAAGCCTTCCCAAAATCCGGGCTTTTCTCCACCCGGCGGTAGAGCTCCGCTAGGGATTC
JMFS120D03+           CCAAGCCTTCCCAAAATCCGGGCTTTTCTCCACCCGGCGGTAGAGCTCCGCTAGGGATTC
JMSF037M03+           CCAAGCCTTCCCAAAATCCGGGCTTTTCTCCACCCGGCGGTAGAGCTCCGCTAGGGATTC
JMSF039B06+                                          ACCCGGCGGTAGAGCTCCGCTAGGGATTC
                      ____________________________________________________________
consensus             CCAAGCCTTCCCAAAATCCGGGCTTTTCTCCACCCGGCGGTAGAGCTCCGCTAGGGATTC
 
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JMFS041C08+           GACGAAATCAACGGGCTTGAGAAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
JMFS120D03+           GACGAAATCAACGGGCTTGAGAAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
JMSF037M03+           GACGAAATCAACGGGCTTGAGAAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
JMSF039B06+           GACGAAATCAACGGGCTTGAGAAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
JMFS021G12+                                                          AGGCAGTAGTGGG
JMFS106B12+                                AAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
                      ____________________________________________________________
consensus             GACGAAATCAACGGGCTTGAGAAACGGGTCAATGGGCGGCTCAAGCGAGGCAGTAGTGGG
 
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JMFS041C08+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
JMFS120D03+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
JMSF037M03+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
JMSF039B06+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
JMFS021G12+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
JMFS106B12+           CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
                      ____________________________________________________________
consensus             CAGCCCATACGGGAGCAGCGTCTCCGCCGCGGATAACGACACGATCTCTAGCGAGTCCGA
 
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JMFS041C08+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
JMFS120D03+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
JMSF037M03+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
JMSF039B06+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
JMFS021G12+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
JMFF003F18+                                                      CGGTACACCTTGGCGGC
JMFS106B12+           CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
                      ____________________________________________________________
consensus             CAGGATGGAGTTAATCGTCGGGTGACCCTGATGATGATGATGCCGGTACACCTTGGCGGC
 
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JMFS041C08+           ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMFS120D03+           ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMSF037M03+           ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMSF039B06+           ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMFS021G12+           ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMFF003F18+           NCCGGCGGCGGCGCCGCCGCCGCCGCTTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
JMFS106B12+           ACCGGCGGCGGCGCCGCCGCCGCCGNCTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
                      ____________________________________________________________
consensus             ACCGGCGGCGGCGCCGCCGCCGCCG-CTCGTGGAGGTGTCGGACGGATTAAAGGCGTGGA
 
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JMFS041C08+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMFS120D03+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMSF037M03+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMSF039B06+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMFS021G12+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMFF003F18+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
JMFS106B12+           CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
                      ____________________________________________________________
consensus             CTTGGATCGTCTTGCACCGGTCTTTCAGCTTGAAACTCCGCATACTACTGGAGATTTGAT
 
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JMFS041C08+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMFS120D03+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMSF037M03+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMSF039B06+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMFS021G12+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMFF003F18+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
JMFS106B12+           GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
                      ____________________________________________________________
consensus             GAACAGAGTACTGACGAAACAGATTCACAAATCTCGATTTTGAAACGCTGTCTGCTTGTT
 
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JMFS041C08+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMFS120D03+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMSF037M03+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMSF039B06+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMFS021G12+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMFF003F18+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
JMFS106B12+           TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
                      ____________________________________________________________
consensus             TGACTTCATTCTCCGGCCCTGAAGTAGACATGAATGAATCTGAAAACTCCACTGAAAAAC
 
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JMFS041C08+           TCTCATCAAT                                                  
JMFS120D03+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
JMSF037M03+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
JMSF039B06+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
JMFS021G12+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
JMFF003F18+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
JMFS106B12+           TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
                      ____________________________________________________________
consensus             TCTCATCAATGATTCCAACTCCGCCTTGCATATACCAATAAGGACACGAGATTTGGGTGG
 
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JMFS120D03+           AGAAGGTGGT                                                  
JMSF037M03+           AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
JMSF039B06+           AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
JMFS021G12+           AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
JMFF003F18+           AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
JMFS106B12+           AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
                      ____________________________________________________________
consensus             AGAAGGTGGTGATGATGAAGCCCTATGGACTCATCCACTGAACCCAACAATGGTGAATCT
 
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JMSF037M03+           TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATG                      
JMSF039B06+           TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATGCAAATGAGAAAA          
JMFS021G12+           TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATGCAAATGAGAAAACAAAAATAAA
JMFF003F18+           TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATGCAAATGAAAAAA          
JMFS106B12+           TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATGCAAATGAGAAAACAAAAATAAA
                      ____________________________________________________________
consensus             TTTTCATTTCATTTCATTTTTTTTTCTTGGAGATGATGCAAATGAGAAAACAAAAATAAA
 
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JMFS021G12+           ATTAAAAAATAGGGTAAAACAATATGTGGAGGGGGAT                       
JMFS106B12+           ATTAAAAAATAGGGTAAAACAATATGTGGAGGGGGATCTATCCACCGTTGTTTGTAATAT
                      ____________________________________________________________
consensus             ATTAAAAAATAGGGTAAAACAATATGTGGAGGGGGATCTATCCACCGTTGTTTGTAATAT