Contig 000478:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS060F11+                                                     ATCAGGGGAGAAATAGTA
                      ____________________________________________________________
consensus                                                       ATCAGGGGAGAAATAGTA
 
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JMFS060F11+           CTTTCCAACAGGTATCCTGCTTCTTGAAGGGTTGTCTTTCATCACCAAATCCATAGACTG
JMFS078E07+                                                               ATAGCCTG
                      ____________________________________________________________
consensus             CTTTCCAACAGGTATCCTGCTTCTTGAAGGGTTGTCTTTCATCACCAAATCCATAGCCTG
 
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JMFS060F11+           GAGAATTTCACGAGGTATGTGAGAGACGGTTCCACCCAAGTAATCCTTAAGCTTTGAAAG
JMFS078E07+           GAGAATTTCACGAGGTATGTGAGAGACGGTTCCACCCAAGTAATCCTTAAGCTTTGAAAG
                      ____________________________________________________________
consensus             GAGAATTTCACGAGGTATGTGAGAGACGGTTCCACCCAAGTAATCCTTAAGCTTTGAAAG
 
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JMFS060F11+           CTTTAAGTCAGCAACATGCTTGATGGTGAACATATATGTGCGAGTCCTGGAACCATCTCC
JMFS078E07+           CTTTAAGTCAGCAACATGCTTGATGGTGAACATATATGTGCGAGTCCTGGAACCATCTCC
                      ____________________________________________________________
consensus             CTTTAAGTCAGCAACATGCTTGATGGTGAACATATATGTGCGAGTCCTGGAACCATCTCC
 
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JMFS060F11+           AGACAAAACCACCTTGAATTCTCCACTAGGTAGTGGAGCTACACTGAAAACGTTCTTCTC
JMFS078E07+           AGACAAAACCACCTTGAATTCTCCACTAGGTAGTGGAGCTACACTGAAAACGTTCTTCTC
                      ____________________________________________________________
consensus             AGACAAAACCACCTTGAATTCTCCACTAGGTAGTGGAGCTACACTGAAAACGTTCTTCTC
 
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JMFS060F11+           TCCATCATAAGTAGTCATGTCCACAGGAAACCCACTAGGATTATCAGCGAACAGTTGCTT
JMFS078E07+           TCCATCATAAGTAGTCATGTCCACAGGAAACCCACTAGGATTATCAGCGAACAGTTGCTT
                      ____________________________________________________________
consensus             TCCATCATAAGTAGTCATGTCCACAGGAAACCCACTAGGATTATCAGCGAACAGTTGCTT
 
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JMFS060F11+           CTTGATCATGGCAAGATCAGATCTTGAAATCGTCTTCTTGGTTGGCTCATTCTCAACTTT
JMFS078E07+           CTTGATCATGGCAAGATCAGATCTTGAAATCGTCTTCTTGGTTGGCTCATTCTCAACTTT
                      ____________________________________________________________
consensus             CTTGATCATGGCAAGATCAGATCTTGAAATCGTCTTCTTGGTTGGCTCATTCTCAACTTT
 
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JMFS060F11+           GACTTGCTTGACATCCACGTCGTAGTGGAATATGGTTGTGTTTGGATTAAAAGTAACTGG
JMFS078E07+           GACTTGCTTGACATCCACGTCGTAGTGGAATATGGTTGTGTTTGGATTAAAAGTAACTGG
JMFS025G06+                                                                 AACTGG
                      ____________________________________________________________
consensus             GACTTGCTTGACATCCACGTCGTAGTGGAATATGGTTGTGTTTGGATTAAAAGTAACTGG
 
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JMFS060F11+           GAAATGATTAACAAGCAGATTGATTTTCCTGATTGCAATGGTTCCAACATTTGGCCTTTT
JMFS078E07+           GAAATGATTAACAAGCAGATTGATTTTCCTGATTGCAATGGTTCCAACATTTGGCCTTTT
JMFS025G06+           GAAATGATTAACAAGCAGATTGATTTTCCTGATGCAATGGTTTCCAACATTTGGCCTTTT
JMFS010H09+                                                    TTCCAACATTGGGCCTTTT
                      ____________________________________________________________
consensus             GAAATGATTAACAAGCAGATTGATTTTCCTGATTGCAATGGTTCCAACATTTGGCCTTTT
 
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JMFS060F11+           GATTGGTGCAAACTTGTTCTTTGAACCTTCATGAGGCAATTGCCTCACGCTAGTCTCAAC
JMFS078E07+           GATTGGTGCAAACTTGTTCTTTGAACCTTCATGAGGCAATTGCCTCACGCTAGTCTCAAC
JMFS025G06+           GATTGGTGCAAACTTGTTCTTTGAACCTTCATGAGGCAATTGCCTCACGCTAGTCTCAAC
JMFS010H09+           GATTGGTGCAAACTTGTTCTTTGAACTTTCATGAGGCAATTGCCTCACGCTAGTCTCAAC
JMFS140G09+                                                                    AAC
JMFS091G02+                                                   TGCCTCACGCTAGTCTCAAC
                      ____________________________________________________________
consensus             GATTGGTGCAAACTTGTTCTTTGAACCTTCATGAGGCAATTGCCTCACGCTAGTCTCAAC
 
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JMFS060F11+           AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGA      
JMFS078E07+           AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
JMFS025G06+           AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
JMFS015F10+                      GCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
JMFS010H09+           AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
JMFS140G09+           AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTAAGGAGAAGAGACCAT
JMFS091G02+           AGGTACTGAAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
JMFS039C12+                                                                   CCAT
                      ____________________________________________________________
consensus             AGGTACTGGAGGCAAAGCAGTGACTTGGGGTTGAGACTGAGACTGAGGAGAAGAGACCAT
 
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JMFS078E07+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS025G06+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS015F10+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS010H09+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS140G09+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS091G02+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
JMFS051G11+                                                           ATGCTGAAGTTG
JMFS039C12+           GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTNAAGTTG
                      ____________________________________________________________
consensus             GGATGGACCCCAGGGCCTTGGTCCTCCAGAGGGACCCGCACTCCGTGGATGCTGAAGTTG
 
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JMFS078E07+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCA                          
JMFS025G06+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS015F10+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS010H09+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS140G09+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS091G02+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS051G11+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS039C12+           GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
JMFS105H02+                                                       CGGGTTGCGGTTGCTG
                      ____________________________________________________________
consensus             GGGGCGATGGGACCCACCCCAAGCACCAGTGGCACTACCGCCACCGGGTTGCGGTTGCTG
 
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JMFS025G06+           CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS015F10+           CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS010H09+           CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS140G09+           CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS091G02+           CTGCTGAAACGGTGGCCGCTGTGGGACACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS051G11+           CTGNTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS039C12+           CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
JMFS105H02+           CTGCTGAAACGGTGGCCGCTGT-GGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
                      ____________________________________________________________
consensus             CTGCTGAAACGGTGGCCGCTGTGGGCCACCCCAGGCCGGAGTGCCACTAGGCTGCTGAAA
 
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JMFS025G06+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS015F10+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS010H09+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS140G09+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS091G02+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS051G11+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS039C12+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
JMFS105H02+           CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
                      ____________________________________________________________
consensus             CTGTGCTCGTGGTGGTGGACCCCACGCGCCACTACCAACAGGCTGCTGTTGCCCTCTCCA
 
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JMFS025G06+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS015F10+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS010H09+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS140G09+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS091G02+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS051G11+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS039C12+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
JMFS105H02+           AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
                      ____________________________________________________________
consensus             AGGAGCCCCGCCAACCGGATTCACCGGACCCTGCTGGTGAGGTCGCGGATCCCCACGGCC
 
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JMFS025G06+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS015F10+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS010H09+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS140G09+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS091G02+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS051G11+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS039C12+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
JMFS105H02+           CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
                      ____________________________________________________________
consensus             CTGCCCGTATCCACCCCGGTAAGATCCACCTCCACCTCCACGTCCACCCCGGCCGCCGGC
 
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JMFS025G06+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS015F10+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS010H09+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS140G09+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS091G02+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS051G11+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS039C12+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
JMFS105H02+           GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
                      ____________________________________________________________
consensus             GCCGGCAACACCTTGATCACCTTGACCTTGTTGACCCCGACCCCCGCCGCGACCACGGCC
 
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JMFS025G06+           TCCGCCAC                                                    
JMFS015F10+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS010H09+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS140G09+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS091G02+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS051G11+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS039C12+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
JMFS105H02+           TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
                      ____________________________________________________________
consensus             TCCGCCACGCCTCCCATTTCCGCCTTCCATATCCACACTCAAATAACTATAACAATACCA
 
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JMFS015F10+           AAA                                                         
JMFS010H09+           AAACAA                                                      
JMFS140G09+           AAACAATAAA                                                  
JMFS091G02+           AAACAATAAACCTTATCTTAGCTCAAATGC                              
JMFS051G11+           AAACAATAAACCTTATCTTAGCTCAAATGCCTCACTATCAACTGAAAATGCATTTATGAA
JMFS039C12+           AAACAATAAACCTTATCTTAGCTCAAATGCCTCACTATCAACTGAAAATGCATTTATGAA
JMFS105H02+           AAACAATAAACCTTATCTTAGCTCAAATGCCTCACTATCAACTGAAAATGCATTTATGAA
                      ____________________________________________________________
consensus             AAACAATAAACCTTATCTTAGCTCAAATGCCTCACTATCAACTGAAAATGCATTTATGAA
 
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JMFS051G11+           GATCAATGTAAAGCAAAAA                                         
JMFS039C12+           GATCAATGTAAAGCAAAAACTACACTTTTATACGCAAGGAATCTAGTCTTGTCTAG    
JMFS105H02+           GATCAATGTAAAGCAAAAACTACACTTTTATACGCAAGGAATCTAGTCTTGTCTAGCTGA
                      ____________________________________________________________
consensus             GATCAATGTAAAGCAAAAACTACACTTTTATACGCAAGGAATCTAGTCTTGTCTAGCTGA
 
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JMFS105H02+           AAATGACGAAAAAGGGTTCCTTAGCCTTAGGCCCCAAGCATCGACCTCTGATTTGCTAAA
                      ____________________________________________________________
consensus             AAATGACGAAAAAGGGTTCCTTAGCCTTAGGCCCCAAGCATCGACCTCTGATTTGCTAAA
 
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JMFS105H02+           GAACAAGAAAAATCATGAAAATTCTAGAAAGACCCATTGAAAAGAGAAAACGCGTAGTGA
                      ____________________________________________________________
consensus             GAACAAGAAAAATCATGAAAATTCTAGAAAGACCCATTGAAAAGAGAAAACGCGTAGTGA