| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS040A08 | Sequence | 494 | 000475 (5) | ref|XP_006361250.1| | 201 | PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum] | |||||
| JMFS103B12 | Sequence | 575 | 000475 (5) | ref|XP_006361250.1| | 216 | PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum] | |||||
| JMFS107F11 | Sequence | 624 | 000475 (5) | ref|XP_006361250.1| | 243 | PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum] | |||||
| JMFS132D02 | Sequence | 626 | 000475 (5) | ref|XP_006361250.1| | 240 | PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum] | |||||
| JMSF024F13 | Sequence | 696 | 000475 (5) | ref|XP_006361250.1| | 268 | PREDICTED: disease resistance protein RPM1-like [Solanum tuberosum] | 685 | 000429 (3) | ref|XP_004244420.1| | 83.6 | PREDICTED: disease resistance protein RPM1-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS107F11+ GCATCGCTCTTGAGAGAGGATGAGAA
____________________________________________________________
consensus GCATCGCTCTTGAGAGAGGATGAGAA
. : . : . : . : . : . :
JMFS107F11+ TGGAAAACACGGCAACCTGCNCCGTAGGGATAAGATGCTATGTCTTCCTTCCGTGTTGTT
____________________________________________________________
consensus TGGAAAACACGGCAACCTGCNCCGTAGGGATAAGATGCTATGTCTTCCTTCCGTGTTGTT
. : . : . : . : . : . :
JMFS107F11+ ATGATTACTCTGCTTCGGTTTTTATCATCAGGGAGAGCAACACTTACTTGTCTCCAAAAA
____________________________________________________________
consensus ATGATTACTCTGCTTCGGTTTTTATCATCAGGGAGAGCAACACTTACTTGTCTCCAAAAA
. : . : . : . : . : . :
JMFS107F11+ TTGATATTCCATACATCATCCAAAACTACAACATACCTCTTTTGCTCCAAGAATTTGACA
____________________________________________________________
consensus TTGATATTCCATACATCATCCAAAACTACAACATACCTCTTTTGCTCCAAGAATTTGACA
. : . : . : . : . : . :
JMFS107F11+ AGCGTCTCCACCAAGTGCTTGTAATCCATGGAATTCAATTTTTTGGGGACCGGTTCATCC
____________________________________________________________
consensus AGCGTCTCCACCAAGTGCTTGTAATCCATGGAATTCAATTTTTTGGGGACCGGTTCATCC
. : . : . : . : . : . :
JMFS107F11+ TCGCCATTGAAAAATTCAGTTACCATCCTTCTGAGCAAGTCCTCTATCGTGTAATGCCTC
JMSF024F13+ CTC
____________________________________________________________
consensus TCGCCATTGAAAAATTCAGTTACCATCCTTCTGAGCAAGTCCTCTATCGTGTAATGCCTC
. : . : . : . : . : . :
JMFS107F11+ GAGACAGACACCCATGCACAGCAGTTGAAATTCCTCTTGATGGAACGGCTGGTGTAGGTT
JMFS132D02+ GCAGTTGAAATTCCTCTTGATGGAACGGCTGGTGTAGGTT
JMSF024F13+ GAGACAGACACCCATGCACAGCAGGTGAAATTCCTCTTGATGGAACGGCTGGTGTAGGTT
____________________________________________________________
consensus GAGACAGACACCCATGCACAGCAGTTGAAATTCCTCTTGATGGAACGGCTGGTGTAGGTT
. : . : . : . : . : . :
JMFS107F11+ TTCGAAACTAAAGTTGTCTTCCCTGAACCCCCCATGCCCACAACAGAAATCACAATGCGG
JMFS040A08+ CAATGCGG
JMFS132D02+ TTCGAAACTAAAGTTGTCTTCCCTGAACCCCCCATGCCCACAACAGAAATCACAATGCGG
JMSF024F13+ TTCGAAACTAAAGTTGTCTTCCCTGAACCCCCCATGCCCACAACAGAAATCACAATGCGG
____________________________________________________________
consensus TTCGAAACTAAAGTTGTCTTCCCTGAACCCCCCATGCCCACAACAGAAATCACAATGCGG
. : . : . : . : . : . :
JMFS107F11+ TGTTCCTCTTCTCCCTCCAACCAGGTTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
JMFS040A08+ TGTTCCTCTTCTCCCTCCAACCAGGTTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
JMFS132D02+ TGTTCCTCTTCTCCCTCCAACCAGGTTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
JMSF024F13+ TGTTCCTCTTCTCCCTCCAACCAGGTTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
JMFS103B12+ TTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
____________________________________________________________
consensus TGTTCCTCTTCTCCCTCCAACCAGGTTAGCAACTCGTCTGTTTCTGAATCGAGTCCAACA
. : . : . : . : . : . :
JMFS107F11+ ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
JMFS040A08+ ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
JMFS132D02+ ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
JMSF024F13+ ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
JMFS103B12+ ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
____________________________________________________________
consensus ATCTCATCACTCCCGATGAAGAAAGCCGAGTCACTGATGTTTTGTGCATGGCTGCGAGAG
. : . : . : . : . : . :
JMFS107F11+ TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTT
JMFS040A08+ TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTTTC
JMFS132D02+ TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTTTC
JMSF024F13+ TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTTTC
JMFS103B12+ TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTTTC
____________________________________________________________
consensus TGACTCGATGGTTCTGAAGATGACACGATGTGACTAAGATCGTACCTCTTACTTCTTTTC
. : . : . : . : . : . :
JMFS040A08+ GCAATGTCTTTGATCTCACCTTTGATCTTTTTCAGCTCAACGGCAGTTCTGTGTGTAATC
JMFS132D02+ GCAATGTCTTTGATCTCACCTTTGATCTTTTTCAGCTCAACGGCAGTTCTGTGTGTAATC
JMSF024F13+ GCAATGTCTTTGATCTCACCTTTGATCTTTTTCAGCTCAACGGCAGTTCTGTGTGTAATC
JMFS103B12+ GCAATGTCTTTGATCTCACCTTTGATCTTTTTCAGCTCAACGGCAGTTCTGTGTGTAATC
____________________________________________________________
consensus GCAATGTCTTTGATCTCACCTTTGATCTTTTTCAGCTCAACGGCAGTTCTGTGTGTAATC
. : . : . : . : . : . :
JMFS040A08+ CAGAGTTCCTCTGGAAGCTTTAACACCCTGAGTAAGAAAGCTTTAAAACCACTTTTCTTC
JMFS132D02+ CAGAGTTCCTCTGGAAGCTTTAACACCCTGAGTAAGAAAGCTTTAAAACCACTTTTCTTC
JMSF024F13+ CAGAGTTCCTCTGGAAGCTTTAACACCCTGAGTAAGAAAGCTTTAAAACCACTTTTCTTC
JMFS103B12+ CAGAGTTCCTCTGGAAGCTTTAACACCCTGAGTAAGAAAGCTTTAAAACCACTTTTCTTC
____________________________________________________________
consensus CAGAGTTCCTCTGGAAGCTTTAACACCCTGAGTAAGAAAGCTTTAAAACCACTTTTCTTC
. : . : . : . : . : . :
JMFS040A08+ ATACCATCTACATGATACAAGAACTCGTCTATAACATCTTCCGCTTCAAACGCTATGTCC
JMFS132D02+ ATACCATCTACATGATACAAGAACTCGTCTATAACATCTTCCGCTTCAAACGCTATGTCC
JMSF024F13+ ATACCATCTACATGATACAAGAACTCGTCTATAACATCTTCCGCTTCAAACGCTATGTCC
JMFS103B12+ ATACCATCTACATGATACAAGAACTCGTCTATAACATCTTCCGCTTCAAACGCTATGTCC
____________________________________________________________
consensus ATACCATCTACATGATACAAGAACTCGTCTATAACATCTTCCGCTTCAAACGCTATGTCC
. : . : . : . : . : . :
JMFS040A08+ CTCACTTGTACTGCCCAAACACACACACCTTCAATTTCGTTTTTGCATTTCTCAGCATCC
JMFS132D02+ CTCACTTGTACTGCCCAAACACACACACCTTCAATTTCGTTTTTGCATTTCTCAGCATCC
JMSF024F13+ CTCACTTGTACTGCCCAAACACACACACCTTCAATTTCGTTTTTGCATTTCTCAGCATCC
JMFS103B12+ CTCACTTGTACTGCCCAAACACACACACCTTCAATTTCGTTTTTGCATTTCTCAGCATCC
____________________________________________________________
consensus CTCACTTGTACTGCCCAAACACACACACCTTCAATTTCGTTTTTGCATTTCTCAGCATCC
. : . : . : . : . : . :
JMFS040A08+ TTTATGAAGCATCTCATGCTCTCGAGCTCAAGTTTGATCTTGGAGATTTCTTGCCGT
JMFS132D02+ TTTATGAAGCATCTCATGCTCTCGAGCTCAAGTTTGATCTTGGAGATTTCTTGCCGTACT
JMSF024F13+ TTTATGAAGCATCTCATGCTCTCGAGCTCAAGTTTGATCTTGGAGATTTCTTGCCGTACT
JMFS103B12+ TTTATGAAGCATCTCATGCTCTCGAGCTCAAGTTTGATCTTGGAGATTTCTTGCCGTACT
____________________________________________________________
consensus TTTATGAAGCATCTCATGCTCTCGAGCTCAAGTTTGATCTTGGAGATTTCTTGCCGTACT
. : . : . : . : . : . :
JMFS132D02+ CCACCAATCAGAAACCCCGGCCTACTGAGAAGGTATGTGATGCTCA
JMSF024F13+ CCACCAATCAGAAACCCCGGCCTACTGAGAAGGTATGTGATGCTCACTACCAAGAGTTCC
JMFS103B12+ CCACCAATCAGAAACCCCGGCCTACTGAGAAGGTATGTGATGCTCACTACCAAGAGTTCC
____________________________________________________________
consensus CCACCAATCAGAAACCCCGGCCTACTGAGAAGGTATGTGATGCTCACTACCAAGAGTTCC
. : . : . : . : . : . :
JMSF024F13+ ACTGCAGCCTCTGCCATTTTTTCTCTTC
JMFS103B12+ ACTGCAGCCTCTGCCATTTTTTCTCTTCAAAAACCTCTGTCTAAGAGAAAGCTTGTTTTT
____________________________________________________________
consensus ACTGCAGCCTCTGCCATTTTTTCTCTTCAAAAACCTCTGTCTAAGAGAAAGCTTGTTTTT