Contig 000472:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS078E04+                                                CTCGAATTCCACTCTTATCNCCG
                      ____________________________________________________________
consensus                                                  CTCGAATTCCACTCTTATCNCCG
 
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JMFS078E04+           TTAGCTTCACCAGAAGAAACTCTAGAAGATGCTACACGAAACTCTTGAGGGGAGCTACCA
                      ____________________________________________________________
consensus             TTAGCTTCACCAGAAGAAACTCTAGAAGATGCTACACGAAACTCTTGAGGGGAGCTACCA
 
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JMFS078E04+           GAAAAGCATCTACCACCCATGGGACGTTCTATGCCTACAGATCGTCTCCCATTGCTTATA
JMFS153F06+                                                                     TA
                      ____________________________________________________________
consensus             GAAAAGCATCTACCACCCATGGGACGTTCTATGCCTACAGATCGTCTCCCATTGCTTATA
 
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JMFS078E04+           ACAGAATCCCTTTCAGCTCTTTTGAGGAGGGCTCCCACGGGTGAAGGAGACGAGGGTGGG
JMFS153F06+           ACAGAATCCCTTTCAGCTC-TTTGAGGAGGGCTCCCACGGGTGAAGGAGACGAGGGTGGG
                      ____________________________________________________________
consensus             ACAGAATCCCTTTCAGCTCTTTTGAGGAGGGCTCCCACGGGTGAAGGAGACGAGGGTGGG
 
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JMFS078E04+           CTTGCAGAAGGATCCCTCAGGGACCTTGATCTTTGAAGGATGACAAGGTCCCTCATAAGG
JMFS153F06+           CTTGCAGAAGGATCCCTCAGGGACCTTGATCTTTGAAGGATGACAAGGTCCCTCATAAGG
                      ____________________________________________________________
consensus             CTTGCAGAAGGATCCCTCAGGGACCTTGATCTTTGAAGGATGACAAGGTCCCTCATAAGG
 
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JMFS078E04+           GACCTATCGGCCAAGATAGGGCTTTGCTTATGCATATGGTTCTTCAAATGAATACAATTC
JMFS153F06+           GACCTATCGGCCAAGATAGGGCTTTGCTTATGCATATGGTTCTTCAAATGAATACAATTC
                      ____________________________________________________________
consensus             GACCTATCGGCCAAGATAGGGCTTTGCTTATGCATATGGTTCTTCAAATGAATACAATTC
 
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JMFS078E04+           GTCAAATGTATATGATTGCGCAAATGATCACTAATGTTACCATTCACATCCTTGAGGATC
JMFS153F06+           GTCAAATGTATATGATTGCGCAAATGATCACTAATGTTACCATTCACATCCTTGAGGATC
                      ____________________________________________________________
consensus             GTCAAATGTATATGATTGCGCAAATGATCACTAATGTTACCATTCACATCCTTGAGGATC
 
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JMFS078E04+           CGGTCCCGGACAATCCTTGTCATGATCACCACATCAAATCGATCTGATCACATAAATATT
JMFS153F06+           CGGTCCCGGACAATCCTTGTCATGATCACCACATCAAATCGATCTGATCACATAAATATT
                      ____________________________________________________________
consensus             CGGTCCCGGACAATCCTTGTCATGATCACCACATCAAATCGATCTGATCACATAAATATT
 
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JMFS078E04+           CTTGAATGAAGACTGGAGATCAGAGAATACTCCATTCTCTCAATCCATATCATTATTACA
JMFS153F06+           CTTGAATGAAGACTGGAGATCAGAGAATACTCCATTCTCTCAATCCATATCATTATTACA
JMFS149C03+            TTGAATGAAGACTGGAGATCAGAGAATACTCCATTCTCTCAATCCATATCATTATTACA
JMFS100A08+                                                TCTCAATCCATATCATTATTACA
                      ____________________________________________________________
consensus             CTTGAATGAAGACTGGAGATCAGAGAATACTCCATTCTCTCAATCCATATCATTATTACA
 
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JMFS078E04+           AAGAACTTCCAATTCACTAACAGAGCTTCACTCTTATTTTCTCTATATATACCAATAATG
JMFS153F06+           AAGAACTTCCAATTCACTAACAGAGCTTCACTCTTATTTTCTCTATATATACCAATAATG
JMFS149C03+           AAGAACTTCCAATTCACTAACAGAGCTTCACTCTTATTTTCTCTATATATACCAATAATG
JMFS100A08+           AAGAACTTCCAATTCACTAACAGAGCTTCACTCTTATTTTCTCTATATATACCAATAATG
                      ____________________________________________________________
consensus             AAGAACTTCCAATTCACTAACAGAGCTTCACTCTTATTTTCTCTATATATACCAATAATG
 
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JMFS078E04+           ACCAAATTCAACCATCAATCTTCACCTTCCAAAATTCTCACTCCAAACTGGTACTACTTC
JMFS153F06+           ACCAAATTCAACCATCAATCTTCACCTTCCAAAATTCTCACTCCAAACTGGTACTACTTC
JMFS149C03+           ACCAAATTCAACCATCAATCTTCACCTTCCAAAATTCTCACTCCAAACTGGTACTACTTC
JMFS100A08+           ACCAAATTCAACCATCAATCTTCACCTTCCAAAATTCTCACTCCAAACTGGTACTACTTC
                      ____________________________________________________________
consensus             ACCAAATTCAACCATCAATCTTCACCTTCCAAAATTCTCACTCCAAACTGGTACTACTTC
 
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JMFS153F06+           CCATATATACTATACTAACTGCTAGTCATGAAACCAAAAACTCAAAGAACCAACTATTGA
JMFS149C03+           CCATATATACTATACTAACTGCTAGTCATGAAACCAAAAACTCAAAGAACCAACTATTGA
JMFS100A08+           CCATATATACTATACTAACTGCTAGTCATGAAACCAAAAACTCAAAGAACCAACTATTGA
                      ____________________________________________________________
consensus             CCATATATACTATACTAACTGCTAGTCATGAAACCAAAAACTCAAAGAACCAACTATTGA
 
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JMFS153F06+           TGCACCCCATACCCAGAAATCAAGAACAGCAACCCATCTTGAGTTCCAGCATAAAAATTC
JMFS149C03+           TGCACCCCATACCCAGAAATCAAGAACAGCAACCCATCTTGAGTTCCAGCATAAAAATTC
JMFS100A08+           TGCACCCCATACCCAGAAATCAAGAACAGCAACCCATCTTGAGTTCCAGCATAAAAATTC
                      ____________________________________________________________
consensus             TGCACCCCATACCCAGAAATCAAGAACAGCAACCCATCTTGAGTTCCAGCATAAAAATTC
 
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JMFS153F06+           AATCTTTACTGAATCAAG                                          
JMFS149C03+           AATCTTTACTGAATCAAGAGAGGCAACCCCTCCTACTAGCTATGCTGCAAGCGACACGTT
JMFS100A08+           AATCTTTACTGAATCAAGAGAGGCAACCCCTCCTACTAGCTATGCTGCAAGCGACACGTT
                      ____________________________________________________________
consensus             AATCTTTACTGAATCAAGAGAGGCAACCCCTCCTACTAGCTATGCTGCAAGCGACACGTT
 
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JMFS149C03+           GATATCATTAACACTGTTTAGTTTCTTTCACTTTCCCAGATCTCCCTCTCCACCCCCCAC
JMFS100A08+           GATATCATTAACACTGTTTAGTTTCTTTCACTTTCCCAGATCTCCCTCTCCACCCCCCAC
                      ____________________________________________________________
consensus             GATATCATTAACACTGTTTAGTTTCTTTCACTTTCCCAGATCTCCCTCTCCACCCCCCAC
 
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JMFS149C03+           ACACTTTCACATGAACCTCACGGGAGCTTCTTGCAAGAAAACGATGGAGTAACATAACAA
JMFS100A08+           ACACTTTCACATGAACCTCACGGGAGCTTCTTGCAAGAAAACGATGGAGTAACATAACAA
                      ____________________________________________________________
consensus             ACACTTTCACATGAACCTCACGGGAGCTTCTTGCAAGAAAACGATGGAGTAACATAACAA
 
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JMFS149C03+           GACGCCAAAACACACAAACCCATGTTGCCTCTGTGCCTTCATAAAATGCGTGTTTCTTAC
JMFS100A08+           GACGCCAAAACACACAAACCCATGTTGCCTCTGTGCCTTCATAAAATGCGTGTTTCTTAC
                      ____________________________________________________________
consensus             GACGCCAAAACACACAAACCCATGTTGCCTCTGTGCCTTCATAAAATGCGTGTTTCTTAC
 
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JMFS149C03+           TTTTCTTTTGTGAGAGTGAAAGGGAAAGGAGTGAATCAGTGAGTGAGAGATGCAGAATCT
JMFS100A08+           TTTTCTTTTGTGAGAGTGAAAGGGAAAGGAGTGAATCAGTGAGTGAGAGATGCAGAATCT
                      ____________________________________________________________
consensus             TTTTCTTTTGTGAGAGTGAAAGGGAAAGGAGTGAATCAGTGAGTGAGAGATGCAGAATCT
 
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JMFS149C03+           GAAATGTAGTTTTCAGAGTGAGATTCTGGG                              
JMFS100A08+           GAAATGTAGTTTTCAGAGTGAGATTCTGGGCAGTTTGGAGGAGAGTTGAAACTTGAAAGG
                      ____________________________________________________________
consensus             GAAATGTAGTTTTCAGAGTGAGATTCTGGGCAGTTTGGAGGAGAGTTGAAACTTGAAAGG