Contig 000470:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS099A02Sequence621000470 (6)
JMFS099D02Sequence619000470 (6)
JMFS114F08Sequence567000470 (6)
JMFS121G09Sequence575000470 (6)
JMFS131A08Sequence626000470 (6)
JMFS163G06Sequence624000470 (6)

Alignment

This contig is upended


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JMFS163G06+                                                   CCAACAAAACCAAGATCCTT
                      ____________________________________________________________
consensus                                                     CCAACAAAACCAAGATCCTT
 
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JMFS163G06+           CCCCATGCAATAATCGGAGCTCAAAACCAAAAATAGTTACAAGGATGCATATATGACTGA
JMFS099D02+           CCCCATGCAATAATCGGAGCTCAAAACCAAAAATAGTTACAAGNATGCATATATGNCTGN
JMFS131A08+                                         AAATAGTTACAAGGATGCATATATGACTGA
JMFS099A02+                                                 ACAAGGATGCATATATGACTGA
                      ____________________________________________________________
consensus             CCCCATGCAATAATCGGAGCTCAAAACCAAAAATAGTTACAAGGATGCATATATGACTGA
 
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JMFS163G06+           CAAAACCATACACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
JMFS099D02+           CAAAACCATACACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
JMFS131A08+           CAAAACCATACACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
JMFS121G09+                     CACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
JMFS114F08+                                         ACAATCATCTGTATATAATGCATTGAACTA
JMFS099A02+           CAAAACCATACACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
                      ____________________________________________________________
consensus             CAAAACCATACACCAATACACTGCTTGCCAACAATCATCTGTATATAATGCATTGAACTA
 
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JMFS163G06+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
JMFS099D02+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
JMFS131A08+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
JMFS121G09+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
JMFS114F08+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
JMFS099A02+           ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
                      ____________________________________________________________
consensus             ACAAACATCATTTTTTTTGTGTGGGATGGGATGGTTCAACAACCTCATACCTTGTGTAGC
 
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JMFS163G06+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
JMFS099D02+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
JMFS131A08+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
JMFS121G09+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
JMFS114F08+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
JMFS099A02+           CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
                      ____________________________________________________________
consensus             CCTCTCAAACGAAAATAATTAAACCAAAACAGCCCAAATTTGTTCTAAAACGACGAGGGA
 
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JMFS163G06+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
JMFS099D02+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
JMFS131A08+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
JMFS121G09+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
JMFS114F08+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAATAAAAAAAAACCCTAAA
JMFS099A02+           GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
                      ____________________________________________________________
consensus             GAAGAAAGTAATGATCTTGAAAATGATTATATATAAAATAAAAT-AAAAAAAACCCTAAA
 
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JMFS163G06+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
JMFS099D02+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
JMFS131A08+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
JMFS121G09+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
JMFS114F08+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
JMFS099A02+           TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
                      ____________________________________________________________
consensus             TTTTACAACAACCCCACTCAATGAAGTATTATCATAATTCTACCATCCAAAGTTTGACAA
 
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JMFS163G06+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
JMFS099D02+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
JMFS131A08+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
JMFS121G09+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
JMFS114F08+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
JMFS099A02+           TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
                      ____________________________________________________________
consensus             TCAGATACAAAACGACAAATAAGAACAATTCAACCCATAGTTATAATTTAGCTACACGAA
 
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JMFS163G06+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
JMFS099D02+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
JMFS131A08+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
JMFS121G09+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
JMFS114F08+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
JMFS099A02+           TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
                      ____________________________________________________________
consensus             TTTAGAATCGAAAACAATTTTTTGATCTGCAATCCTCAAGATTTTCTACCTGGAAAGGAA
 
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JMFS163G06+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
JMFS099D02+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
JMFS131A08+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
JMFS121G09+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
JMFS114F08+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
JMFS099A02+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
                      ____________________________________________________________
consensus             AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
 
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JMFS163G06+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAAGCGAGATATTGTGTGATGGCA
JMFS099D02+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
JMFS131A08+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
JMFS121G09+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
JMFS114F08+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
JMFS099A02+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
                      ____________________________________________________________
consensus             ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
 
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JMFS163G06+           ACGCA                                                       
JMFS099D02+           ACGCACCCTTCT                                                
JMFS131A08+           ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAA   
JMFS121G09+           ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATA              
JMFS114F08+           ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAA   
JMFS099A02+           ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAAGGA
                      ____________________________________________________________
consensus             ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAAGGA