Contig 000468:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS056C02Sequence642000468 (2)ref|XP_011078921.1|1e-81PREDICTED: DNA helicase INO80 isoform X2 [Sesamum indicum]
JMFS097E05Sequence619000468 (2)emb|CDP14166.1|8e-78unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS056C02+                                       CTACCAAAAATGGCCNCCATATATTCTTTTCT
                      ____________________________________________________________
consensus                                         CTACCAAAAATGGCCNCCATATATTCTTTTCT
 
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JMFS056C02+           TCTGCCAAATGAGCCAAGAATGCCATGGCTTGAATGGTCTTTCCTAGGCCCATTTCATCA
                      ____________________________________________________________
consensus             TCTGCCAAATGAGCCAAGAATGCCATGGCTTGAATGGTCTTTCCTAGGCCCATTTCATCA
 
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JMFS056C02+           GCAAGAATGCCATTTAAACCCTGCTCATAACAATTAACAAGCCATTGAAGACCTTTCAGT
                      ____________________________________________________________
consensus             GCAAGAATGCCATTTAAACCCTGCTCATAACAATTAACAAGCCATTGAAGACCTTTCAGT
 
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JMFS056C02+           TGATATTCTTTTAGGGTACCCTTGAATAACTCTGGTGTCTGCACTGTTGATGCTACAGGC
                      ____________________________________________________________
consensus             TGATATTCTTTTAGGGTACCCTTGAATAACTCTGGTGTCTGCACTGTTGATGCTACAGGC
 
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JMFS056C02+           ATGGTGGACGGATGCAACAAGTCTATGTTACTAGAACCGGTAACTGAGGCATCTGGTAGG
                      ____________________________________________________________
consensus             ATGGTGGACGGATGCAACAAGTCTATGTTACTAGAACCGGTAACTGAGGCATCTGGTAGG
 
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JMFS056C02+           GAGTTCTCAGTTTCAGAAGCTAGCCGCAGCTTCAAGCATTCATTATCAAATGCACTTGTC
                      ____________________________________________________________
consensus             GAGTTCTCAGTTTCAGAAGCTAGCCGCAGCTTCAAGCATTCATTATCAAATGCACTTGTC
 
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JMFS056C02+           ATCTTTTTCTGCTTTGAAACTGCATCTTGAGCGGCTTTCAGAGCCTCCTTTCTCAGCTCA
JMFS097E05+                                                    AGCCTCCTTTCTCAGCTCA
                      ____________________________________________________________
consensus             ATCTTTTTCTGCTTTGAAACTGCATCTTGAGCGGCTTTCAGAGCCTCCTTTCTCAGCTCA
 
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JMFS056C02+           GCCTCTTCAGGATCTTCTTCCTCTCCAGGTTGAGCTTCAGCAGAACTTAACAGCATTTCT
JMFS097E05+           GCCTCTTCAGGATCTTCTTCCTCTCCAGGTTGAGCTTCAGCAGAACTTAACAGCATTTCT
                      ____________________________________________________________
consensus             GCCTCTTCAGGATCTTCTTCCTCTCCAGGTTGAGCTTCAGCAGAACTTAACAGCATTTCT
 
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JMFS056C02+           TGGTCATCTGCTCTTTCACTGTCAATATTCAAGGCCTCGGTGGGTTGTGAGGATGACTTG
JMFS097E05+           TGGTCATCTGCTCTTTCACTGTCAATATTCAAGGCCTCGGTGGGTTGTGAGGATGACTTG
                      ____________________________________________________________
consensus             TGGTCATCTGCTCTTTCACTGTCAATATTCAAGGCCTCGGTGGGTTGTGAGGATGACTTG
 
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JMFS056C02+           TTCTGCATAAAGTGGCTGTAAAGTTCAGTTTGTGACAACAGAAAGTTGAGCCTTTGCTGT
JMFS097E05+           TTCTGCATAAAGTGGCTGTAAAGTTCAGTTTGTGACAACAGAAAGTTGAGCCTTTGCTGT
                      ____________________________________________________________
consensus             TTCTGCATAAAGTGGCTGTAAAGTTCAGTTTGTGACAACAGAAAGTTGAGCCTTTGCTGT
 
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JMFS056C02+           TGCCTCCTTGCTTCACGAAGCTCCTGTTCACGTTTCAAAGCTTCTGCAGCTTCTTTTTCC
JMFS097E05+           TGCCTCCTTGCTTCACGAAGCTCCTGTTCACGTTTCAAAGCTTCTGCAGCTTCTTTTTCC
                      ____________________________________________________________
consensus             TGCCTCCTTGCTTCACGAAGCTCCTGTTCACGTTTCAAAGCTTCTGCAGCTTCTTTTTCC
 
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JMFS056C02+           TCTCTCTTCC                                                  
JMFS097E05+           TCTCTCTTCCTCACTTCAGCCATCTCCTTGTCAACTCTCTTCCAAAATACCAACATGTCC
                      ____________________________________________________________
consensus             TCTCTCTTCCTCACTTCAGCCATCTCCTTGTCAACTCTCTTCCAAAATACCAACATGTCC
 
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JMFS097E05+           CTGGTAAGTTTCCTAGTACGTATTCCAGCACCTCTCATCACCTTAAGCGATCTACCAACC
                      ____________________________________________________________
consensus             CTGGTAAGTTTCCTAGTACGTATTCCAGCACCTCTCATCACCTTAAGCGATCTACCAACC
 
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JMFS097E05+           TTCAATTTTACCTCTCTTTGACAGGTTTCTGAGAACCTCTTGGCATCAGTGAATTGCTTT
                      ____________________________________________________________
consensus             TTCAATTTTACCTCTCTTTGACAGGTTTCTGAGAACCTCTTGGCATCAGTGAATTGCTTT
 
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JMFS097E05+           TTGTGAAAATTAGTGAAAAGTCTGTGATGTTTTGGGATGTCTTTCCTAACCATATTCACC
                      ____________________________________________________________
consensus             TTGTGAAAATTAGTGAAAAGTCTGTGATGTTTTGGGATGTCTTTCCTAACCATATTCACC
 
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JMFS097E05+           CAATATTTTCCAATCTTTTCCATCTCTTCCCTCTCAACCACAGCAGGGTCTTTCTCCACC
                      ____________________________________________________________
consensus             CAATATTTTCCAATCTTTTCCATCTCTTCCCTCTCAACCACAGCAGGGTCTTTCTCCACC
 
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JMFS097E05+           TTTGGCTTTTTGGGCAGACTACGTTCAATAATCTCATATGTGTCTCCTTTCTCCAACACC
                      ____________________________________________________________
consensus             TTTGGCTTTTTGGGCAGACTACGTTCAATAATCTCATATGTGTCTCCTTTCTCCAACACC