Contig 000466:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS096A07Sequence642000466 (2)ref|XP_009588518.1|6e-72PREDICTED: uncharacterized protein At3g06530 isoform X2 [Nicotiana tomentosifor
JMSF043K12Sequence778000466 (2)ref|XP_009786723.1|3e-72PREDICTED: uncharacterized protein At3g06530 isoform X3 [Nicotiana sylvestris]702017244ref|XP_006421550.1|2e-68hypothetical protein CICLE_v100041221mg, partial [Citrus clementina] gb|ESR34790

Alignment

This contig is upended


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JMSF043K12+                                     ACTCAATTGTGGTAATTGCTGCGAGTTTCAATTG
                      ____________________________________________________________
consensus                                       ACTCAATTGTGGTAATTGCTGCGAGTTTCAATTG
 
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JMSF043K12+           AGTGCTTGAGTCACTTGCAGGATCATCAATAAACTTCAGTATTACTAAACACATCGTGTT
                      ____________________________________________________________
consensus             AGTGCTTGAGTCACTTGCAGGATCATCAATAAACTTCAGTATTACTAAACACATCGTGTT
 
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JMSF043K12+           AAAGACTTCCAAAGAATCCTCATCAAGGTGAATCCATGAATTTCTTGAGGTTGAAGTTAG
                      ____________________________________________________________
consensus             AAAGACTTCCAAAGAATCCTCATCAAGGTGAATCCATGAATTTCTTGAGGTTGAAGTTAG
 
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JMSF043K12+           TTCTTTTTTCCCACGCTTTGCATCTATGACACCAGTGGCCTTCACGGTGTCACACAAAAT
                      ____________________________________________________________
consensus             TTCTTTTTTCCCACGCTTTGCATCTATGACACCAGTGGCCTTCACGGTGTCACACAAAAT
 
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JMSF043K12+           CCCAAGAGCCTTCTTTTTGACATTAATATCTGCATGTCCAAGTAATTGTATAACAATTTT
                      ____________________________________________________________
consensus             CCCAAGAGCCTTCTTTTTGACATTAATATCTGCATGTCCAAGTAATTGTATAACAATTTT
 
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JMSF043K12+           GAAGTATATTGATGGTCTGAGGCACTTTGCAATTGCCTTTAAGACAGAGCGTATGCGCTC
                      ____________________________________________________________
consensus             GAAGTATATTGATGGTCTGAGGCACTTTGCAATTGCCTTTAAGACAGAGCGTATGCGCTC
 
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JMSF043K12+           CTTCAGTTCCTTCCTGATTAGAGGAGCACTCATCTGCTTTCCATTGGATTCCACCAGTTG
                      ____________________________________________________________
consensus             CTTCAGTTCCTTCCTGATTAGAGGAGCACTCATCTGCTTTCCATTGGATTCCACCAGTTG
 
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JMSF043K12+           CAGATGAGAGACCATTTTTTCCAAAATTACACCAATTGATGGCTGAATGCTTTCTGAGCC
                      ____________________________________________________________
consensus             CAGATGAGAGACCATTTTTTCCAAAATTACACCAATTGATGGCTGAATGCTTTCTGAGCC
 
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JMSF043K12+           ATCTCCAGAATCAAGCATAAAGGCAATTTCAGGATCTTGCAGCTTATTTGAAACAAAATG
                      ____________________________________________________________
consensus             ATCTCCAGAATCAAGCATAAAGGCAATTTCAGGATCTTGCAGCTTATTTGAAACAAAATG
 
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JMSF043K12+           CTCTGCAACTACCAAGACCATAAACAATTCTTCACTTTCACAATCTATTCCTATTTTCTG
                      ____________________________________________________________
consensus             CTCTGCAACTACCAAGACCATAAACAATTCTTCACTTTCACAATCTATTCCTATTTTCTG
 
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JMSF043K12+           AAGCAGAATGGCAATGGAGGGAAGCCATACTGTGCATGGATATTGCTCAGACAACAACAC
JMFS096A07+                             GGGAAGCCATACTGTGCATGGATATTGCTCAGACAACAACAC
                      ____________________________________________________________
consensus             AAGCAGAATGGCAATGGAGGGAAGCCATACTGTGCATGGATATTGCTCAGACAACAACAC
 
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JMSF043K12+           AGCAAATGCATACTCCCATTCCATACTAATTGTAGAGGTTATATAACCCAAAGAAGGACT
JMFS096A07+           AGCAAATGCATACTCCCATTCCATACTAATTGTAGAGGTTATATAACCCAAAGAAGGACT
                      ____________________________________________________________
consensus             AGCAAATGCATACTCCCATTCCATACTAATTGTAGAGGTTATATAACCCAAAGAAGGACT
 
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JMSF043K12+           GGCACCACTAGTGCAAGACGAACTCTTTCTTGAGATGACGGAACGGAAGAGGAGGAAGAA
JMFS096A07+           GGCACCACTAGTGCAAGACGAACTCTTTCTTGAGATGACGGAACGGAAGAGGAGGAAGAA
                      ____________________________________________________________
consensus             GGCACCACTAGTGCAAGACGAACTCTTTCTTGAGATGACGGAACGGAAGAGGAGGAAGAA
 
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JMSF043K12+           AAGTGATCCCAAACTAGTATTCTC                                    
JMFS096A07+           AAGTGATCCCAAACTAGTATTCTCGCCTAAGTTCTTCAAAAGGTGCGTAATAATTGAAAG
                      ____________________________________________________________
consensus             AAGTGATCCCAAACTAGTATTCTCGCCTAAGTTCTTCAAAAGGTGCGTAATAATTGAAAG
 
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JMFS096A07+           CCTCCGATGTTCAGACACTTTGGGCAGAAAATTCACAAATATCTGTAGCAATGCATCCAT
                      ____________________________________________________________
consensus             CCTCCGATGTTCAGACACTTTGGGCAGAAAATTCACAAATATCTGTAGCAATGCATCCAT
 
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JMFS096A07+           ACTGTCAGTTTTAGACAACCAACATGGCACAATAGCAGAAATGAGGTCTTCAAAGACGCG
                      ____________________________________________________________
consensus             ACTGTCAGTTTTAGACAACCAACATGGCACAATAGCAGAAATGAGGTCTTCAAAGACGCG
 
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JMFS096A07+           TTGAGAATAGCTGTCCCACTGTGTAACTGCAGTTTCCCCCACGATAATCAGAATATCTAA
                      ____________________________________________________________
consensus             TTGAGAATAGCTGTCCCACTGTGTAACTGCAGTTTCCCCCACGATAATCAGAATATCTAA
 
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JMFS096A07+           AATGTTGTCCAAAACTCTGTCGGGCATGACCTTTGCAATAGTAGATAACAATGACAAAAC
                      ____________________________________________________________
consensus             AATGTTGTCCAAAACTCTGTCGGGCATGACCTTTGCAATAGTAGATAACAATGACAAAAC
 
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JMFS096A07+           ATGATTGCGGGTCAAAGCATCACTTGCAAGACGGGCACATTTGATTAGCAATTCCAAATC
                      ____________________________________________________________
consensus             ATGATTGCGGGTCAAAGCATCACTTGCAAGACGGGCACATTTGATTAGCAATTCCAAATC
 
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JMFS096A07+           AAATTCTACACCATCGCCATCCTTGGATGTGATTGAAGTAGCAATATCTTCTAACAGTAG
                      ____________________________________________________________
consensus             AAATTCTACACCATCGCCATCCTTGGATGTGATTGAAGTAGCAATATCTTCTAACAGTAG
 
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JMFS096A07+           GAGTGCTGTTTGTTGAATGTGAATTACAGCACTAGAAGTAGTCTGAGAACAAGATGTTAG
                      ____________________________________________________________
consensus             GAGTGCTGTTTGTTGAATGTGAATTACAGCACTAGAAGTAGTCTGAGAACAAGATGTTAG