Contig 000464:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044H13Sequence643000464 (9)ref|XP_006349369.1|4e-52PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum]632011172 (7)ref|XP_004230485.1|1e-37PREDICTED: potassium channel AKT2/3-like [Solanum lycopersicum]
JMFS029E01Sequence650000464 (9)ref|XP_006349369.1|4e-84PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum]
JMFS051B10Sequence601000464 (9)ref|XP_006349369.1|2e-47PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum]
JMFS069C07Sequence627000464 (9)ref|XP_004230485.1|2e-62PREDICTED: potassium channel AKT2/3-like [Solanum lycopersicum]
JMFS095A03Sequence559000464 (9)ref|XP_006431832.1|8e-21hypothetical protein CICLE_v10000273mg [Citrus clementina] gb|ESR45072.1| hypoth
JMSF009J13Sequence411000464 (9)ref|XP_006349369.1|5e-18PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum]669011172 (7)emb|CAA70947.1|1e-74putative inward rectifying potassium channel [Solanum tuberosum]
JMSF036H12Sequence611000464 (9)ref|XP_006349369.1|4e-40PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum]848011172 (7)ref|XP_009795716.1|1e-78PREDICTED: potassium channel AKT2/3-like [Nicotiana sylvestris]
JMSF042F23Sequence243000464 (9)755011172 (7)emb|CAA70947.1|2e-93putative inward rectifying potassium channel [Solanum tuberosum]
JMSF050G07Sequence594000464 (9)dbj|BAA84085.1|6e-53potassium channel [Nicotiana paniculata]

Alignment

This contig is upended


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JMFS029E01+                         GCACATCTAACCCAGAAATAGCTGAACCTGATGTCCTCNTCTAGCC
JMFS069C07+                                                                TCTAGCC
                      ____________________________________________________________
consensus                           GCACATCTAACCCAGAAATAGCTGAACCTGATGTCCTCNTCTAGCC
 
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JMFS029E01+           TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
JMFS069C07+           TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
JMSF050G07+                                                               GACGGAGT
                      ____________________________________________________________
consensus             TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
 
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JMFS029E01+           AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMFS069C07+           AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMSF050G07+           AGCAGACTCTTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMFF044H13+                                                           CGAAAGGGATGG
                      ____________________________________________________________
consensus             AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
 
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JMFS029E01+           TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTTTGCGAT
JMFS069C07+           TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTT-TGCGAT
JMSF050G07+           TTGAGGCTACGTCCATCNGGAACCANGTTGACAGATACCNGGTAGCAATTTTTTTGCGAT
JMFS051B10+                      TCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTNTGCGAT
JMSF036H12+                              GAACCANGTTGACAGATACCNGGTAGCAATTTTTTTGCGAT
JMFF044H13+           TTGGGGCTACGTCCATCAGGAACCATGTGNACAGATACCTGGTAGCAATTTTTTTGCGAT
                      ____________________________________________________________
consensus             TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTTTGCGAT
 
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JMFS029E01+           GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMFS069C07+           GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMSF050G07+           GATGAATAAGAAGNTGAGTGGNGGGATCAATGTAAGCGACGAAGAAAGTCANGACGATAT
JMFS051B10+           GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMSF036H12+           GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCANGACGATAT
JMFF044H13+           GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
                      ____________________________________________________________
consensus             GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
 
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JMFS029E01+           CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFS069C07+           CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF050G07+           CANCCGCAAAAAACAGGTNTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFS051B10+           CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF036H12+           CNNCCGCAAAAAACANGTNTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFF044H13+           CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF009J13+                                                        TCGTGTCCAGCTTCG
JMFS095A03+                                                    AGCTTCGTGTCCAGCTTCG
                      ____________________________________________________________
consensus             CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
 
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JMFS029E01+           ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMFS069C07+           ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF050G07+           ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFS051B10+           ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF036H12+           ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFF044H13+           ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF009J13+           ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFS095A03+           ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
                      ____________________________________________________________
consensus             ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
 
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JMFS029E01+           TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMFS069C07+           TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF050G07+           TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGANGACTAGCCCCNGGGATG
JMFS051B10+           TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF036H12+           TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGANGACTAGCCCCNGGGATG
JMFF044H13+           TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF009J13+           TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGATGACTAGCCCCNGGGATG
JMFS095A03+           TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
                      ____________________________________________________________
consensus             TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
 
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JMFS029E01+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS069C07+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF050G07+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS051B10+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF036H12+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFF044H13+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF009J13+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS095A03+           AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
                      ____________________________________________________________
consensus             AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
 
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JMFS029E01+           AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS069C07+           AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF050G07+           NGCTGAAATNTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS051B10+           AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF036H12+           NGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFF044H13+           AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF009J13+           NGCNGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF042F23+                             CTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS095A03+           AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
                      ____________________________________________________________
consensus             AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
 
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JMFS029E01+           TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS069C07+           TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF050G07+           TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS051B10+           TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF036H12+           TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFF044H13+           TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF009J13+           TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF042F23+           TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS095A03+           TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
                      ____________________________________________________________
consensus             TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
 
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JMFS029E01+           TCTC                                                        
JMFS069C07+           TCTCTCTCTCTCTCTCT                                           
JMSF050G07+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACG                
JMFS051B10+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF036H12+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMFF044H13+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF009J13+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF042F23+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMFS095A03+           TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
 
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JMFS051B10+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMSF036H12+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMFF044H13+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMSF009J13+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAG                         
JMSF042F23+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMFS095A03+           TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
                      ____________________________________________________________
consensus             TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
 
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JMFS051B10+           TGTATATATTTG                                                
JMSF036H12+           TGTATATATTTGCAGCAATTAT                                      
JMFF044H13+           TGTATATATTTGCAGCAATTAT                                      
JMSF042F23+           TGTATATATTTGCAGCAATT                                        
JMFS095A03+           TGTATATATTTGCAGCAATTATTGTAAGCAGGAACTGACTGGTAGGGGACTGGGTATGTA
                      ____________________________________________________________
consensus             TGTATATATTTGCAGCAATTATTGTAAGCAGGAACTGACTGGTAGGGGACTGGGTATGTA
 
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JMFS095A03+           TATGATGATGGTCTGGTATGCAGCTAGTCGCCTGCTGACAAGTGGTGGGGATGATGGAAA
                      ____________________________________________________________
consensus             TATGATGATGGTCTGGTATGCAGCTAGTCGCCTGCTGACAAGTGGTGGGGATGATGGAAA