clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF044H13 | Sequence | 643 | 000464 (9) | ref|XP_006349369.1| | 4e-52 | PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum] | 632 | 011172 (7) | ref|XP_004230485.1| | 1e-37 | PREDICTED: potassium channel AKT2/3-like [Solanum lycopersicum] |
JMFS029E01 | Sequence | 650 | 000464 (9) | ref|XP_006349369.1| | 4e-84 | PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum] | |||||
JMFS051B10 | Sequence | 601 | 000464 (9) | ref|XP_006349369.1| | 2e-47 | PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum] | |||||
JMFS069C07 | Sequence | 627 | 000464 (9) | ref|XP_004230485.1| | 2e-62 | PREDICTED: potassium channel AKT2/3-like [Solanum lycopersicum] | |||||
JMFS095A03 | Sequence | 559 | 000464 (9) | ref|XP_006431832.1| | 8e-21 | hypothetical protein CICLE_v10000273mg [Citrus clementina] gb|ESR45072.1| hypoth | |||||
JMSF009J13 | Sequence | 411 | 000464 (9) | ref|XP_006349369.1| | 5e-18 | PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum] | 669 | 011172 (7) | emb|CAA70947.1| | 1e-74 | putative inward rectifying potassium channel [Solanum tuberosum] |
JMSF036H12 | Sequence | 611 | 000464 (9) | ref|XP_006349369.1| | 4e-40 | PREDICTED: potassium channel AKT2/3-like [Solanum tuberosum] | 848 | 011172 (7) | ref|XP_009795716.1| | 1e-78 | PREDICTED: potassium channel AKT2/3-like [Nicotiana sylvestris] |
JMSF042F23 | Sequence | 243 | 000464 (9) | 755 | 011172 (7) | emb|CAA70947.1| | 2e-93 | putative inward rectifying potassium channel [Solanum tuberosum] | |||
JMSF050G07 | Sequence | 594 | 000464 (9) | dbj|BAA84085.1| | 6e-53 | potassium channel [Nicotiana paniculata] |
This contig is upended
. : . : . : . : . : . :
JMFS029E01+ GCACATCTAACCCAGAAATAGCTGAACCTGATGTCCTCNTCTAGCC
JMFS069C07+ TCTAGCC
____________________________________________________________
consensus GCACATCTAACCCAGAAATAGCTGAACCTGATGTCCTCNTCTAGCC
. : . : . : . : . : . :
JMFS029E01+ TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
JMFS069C07+ TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
JMSF050G07+ GACGGAGT
____________________________________________________________
consensus TGGTAAAGAAGTTGCTGACTCTGCGAAGCCGCCAGAAGCGTAGCATTCCGAGGACGGAGT
. : . : . : . : . : . :
JMFS029E01+ AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMFS069C07+ AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMSF050G07+ AGCAGACTCTTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
JMFF044H13+ CGAAAGGGATGG
____________________________________________________________
consensus AGCAGACTCCTAAGTGGTGTTTTCCGGTGAAAAGGAAGGCTACGAACTCGAAAGGGATGG
. : . : . : . : . : . :
JMFS029E01+ TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTTTGCGAT
JMFS069C07+ TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTT-TGCGAT
JMSF050G07+ TTGAGGCTACGTCCATCNGGAACCANGTTGACAGATACCNGGTAGCAATTTTTTTGCGAT
JMFS051B10+ TCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTNTGCGAT
JMSF036H12+ GAACCANGTTGACAGATACCNGGTAGCAATTTTTTTGCGAT
JMFF044H13+ TTGGGGCTACGTCCATCAGGAACCATGTGNACAGATACCTGGTAGCAATTTTTTTGCGAT
____________________________________________________________
consensus TTGAGGCTACGTCCATCAGGAACCATGTTGACAGATACCTGGTAGCAATTTTTTTGCGAT
. : . : . : . : . : . :
JMFS029E01+ GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMFS069C07+ GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMSF050G07+ GATGAATAAGAAGNTGAGTGGNGGGATCAATGTAAGCGACGAAGAAAGTCANGACGATAT
JMFS051B10+ GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
JMSF036H12+ GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCANGACGATAT
JMFF044H13+ GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
____________________________________________________________
consensus GATGAATAAGAAGCTGAGTGGTGGGATCAATGTAAGCGACGAAGAAAGTCAAGACGATAT
. : . : . : . : . : . :
JMFS029E01+ CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFS069C07+ CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF050G07+ CANCCGCAAAAAACAGGTNTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFS051B10+ CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF036H12+ CNNCCGCAAAAAACANGTNTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMFF044H13+ CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
JMSF009J13+ TCGTGTCCAGCTTCG
JMFS095A03+ AGCTTCGTGTCCAGCTTCG
____________________________________________________________
consensus CAACCGCAAAAAACAGGTCTACAATGTTGTCTACAACGTAGAGCTTCGTGTCCAGCTTCG
. : . : . : . : . : . :
JMFS029E01+ ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMFS069C07+ ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF050G07+ ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFS051B10+ ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF036H12+ ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFF044H13+ ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
JMSF009J13+ ATTCCANGAATGATATCTCGAAGGGGCAAACCCANGCAGAGTACGCCACCAGCAACACCA
JMFS095A03+ ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
____________________________________________________________
consensus ATTCCAAGAATGATATCTCGAAGGGGCAAACCCATGCAGAGTACGCCACCAGCAACACCA
. : . : . : . : . : . :
JMFS029E01+ TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMFS069C07+ TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF050G07+ TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGANGACTAGCCCCNGGGATG
JMFS051B10+ TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF036H12+ TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGANGACTAGCCCCNGGGATG
JMFF044H13+ TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
JMSF009J13+ TCCATGTCTCCCAACACCNGTATCTTGAATCCANTGGGGAGATGACTAGCCCCNGGGATG
JMFS095A03+ TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
____________________________________________________________
consensus TCCATGTCTCCCAACACCTGTATCTTGAATCCATTGGGGAGATGACTAGCCCCTGGGATG
. : . : . : . : . : . :
JMFS029E01+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS069C07+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF050G07+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS051B10+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF036H12+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFF044H13+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMSF009J13+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
JMFS095A03+ AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
____________________________________________________________
consensus AAGTGTGGGTTGGCTGTGAAGAGCCGAGGGGAGGGAGGATGAATTTGGAGAGTTTTCCCA
. : . : . : . : . : . :
JMFS029E01+ AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS069C07+ AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF050G07+ NGCTGAAATNTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS051B10+ AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF036H12+ NGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFF044H13+ AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF009J13+ NGCNGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMSF042F23+ CTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
JMFS095A03+ AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
____________________________________________________________
consensus AGCTGAAATCTTCATCTTCTTGGGATGATGATGATGATGAAGATGCTGCTGTGTCTTTGT
. : . : . : . : . : . :
JMFS029E01+ TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS069C07+ TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF050G07+ TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS051B10+ TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF036H12+ TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFF044H13+ TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF009J13+ TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMSF042F23+ TCATCANGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
JMFS095A03+ TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
____________________________________________________________
consensus TCATCATGCTGTTTGGAGCTTGGGCAACGTACGTATAGTACACCGGCCTATTCAATCTGA
. : . : . : . : . : . :
JMFS029E01+ TCTC
JMFS069C07+ TCTCTCTCTCTCTCTCT
JMSF050G07+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACG
JMFS051B10+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF036H12+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMFF044H13+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF009J13+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMSF042F23+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
JMFS095A03+ TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
____________________________________________________________
consensus TCTCTCTCTCTCTCTCTTTCTATATATATATATATATACACACGCACACACACAAGTATA
. : . : . : . : . : . :
JMFS051B10+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMSF036H12+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMFF044H13+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMSF009J13+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAG
JMSF042F23+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
JMFS095A03+ TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
____________________________________________________________
consensus TTGGTTATATATATATGGTGAAGAAATGGAAGAAGAAGAAAGAAAAGAGAGATGGATGGA
. : . : . : . : . : . :
JMFS051B10+ TGTATATATTTG
JMSF036H12+ TGTATATATTTGCAGCAATTAT
JMFF044H13+ TGTATATATTTGCAGCAATTAT
JMSF042F23+ TGTATATATTTGCAGCAATT
JMFS095A03+ TGTATATATTTGCAGCAATTATTGTAAGCAGGAACTGACTGGTAGGGGACTGGGTATGTA
____________________________________________________________
consensus TGTATATATTTGCAGCAATTATTGTAAGCAGGAACTGACTGGTAGGGGACTGGGTATGTA
. : . : . : . : . : . :
JMFS095A03+ TATGATGATGGTCTGGTATGCAGCTAGTCGCCTGCTGACAAGTGGTGGGGATGATGGAAA
____________________________________________________________
consensus TATGATGATGGTCTGGTATGCAGCTAGTCGCCTGCTGACAAGTGGTGGGGATGATGGAAA